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The map label for this gene is 108563627

Identifier: 108563627

GI number: 108563627

Start: 1265138

End: 1265602

Strand: Direct

Name: 108563627

Synonym: HPAG1_1202

Alternate gene names: NA

Gene position: 1265138-1265602 (Clockwise)

Preceding gene: 108563626

Following gene: 108563628

Centisome position: 79.25

GC content: 38.28

Gene sequence:

>465_bases
GTGGCAACTAAAAAAACCAAAAAAAATAAAACTCCAGAAAAAAAACGCGCTTTAGAAAACCCTTTAAAAGGGCTGAATCT
CTCTTTACGCTTAAAGGCCTTCATCACCGATATTTTTATGATTTATACCCCCATGCTTTATATAATGACTTATGCGATTT
TAGGGAGCGCGAAGGATTTTAGGGAAAACCAGAGTGCGATTTTTTTATGCCTGCTTTTTTACGCCCTAACGCACAGCTTT
TTTATCGCTTTTAAATCCCAAAGCCCTGGCATGCGTTACGCTCGGTTTAAATTAGTCAAAAATAACCGCAAAGAAGTGGG
CTTTTTTTTAGCGTTGTGGCGCTTTGTTTTGTGGGTGTTGAGCATGGGGTTACTCATAGGGTTTGTTACGCCTTTTATTT
TTAAGTTTTTTTTGCATGACAAACTCAGCGGCACTCATATTGAAATTATCAAGGAGGCAACATGA

Upstream 100 bases:

>100_bases
CATTTGCCCCTTTTTGCTTTAGAAGATTTTGTTTTTGACATGCACAAGCCTAGTTCTTGCCCTTTATGCGCTACTAGCGT
TGCTATAAAGCCAGGAAGTC

Downstream 100 bases:

>100_bases
AAAATTTAGTGATTTTAAGCGGGGCTGGCATTTCAGCAGAAAGCGGGATTAAAACCTTTAGAGACGCTGATGGCTTGTGG
GAAGGGCATGACATCATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: RDD Domain-Containing Protein; Inner Membrane Protein OxaA; RDD Domain Containing Protein

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MATKKTKKNKTPEKKRALENPLKGLNLSLRLKAFITDIFMIYTPMLYIMTYAILGSAKDFRENQSAIFLCLLFYALTHSF
FIAFKSQSPGMRYARFKLVKNNRKEVGFFLALWRFVLWVLSMGLLIGFVTPFIFKFFLHDKLSGTHIEIIKEAT

Sequences:

>Translated_154_residues
MATKKTKKNKTPEKKRALENPLKGLNLSLRLKAFITDIFMIYTPMLYIMTYAILGSAKDFRENQSAIFLCLLFYALTHSF
FIAFKSQSPGMRYARFKLVKNNRKEVGFFLALWRFVLWVLSMGLLIGFVTPFIFKFFLHDKLSGTHIEIIKEAT
>Mature_153_residues
ATKKTKKNKTPEKKRALENPLKGLNLSLRLKAFITDIFMIYTPMLYIMTYAILGSAKDFRENQSAIFLCLLFYALTHSFF
IAFKSQSPGMRYARFKLVKNNRKEVGFFLALWRFVLWVLSMGLLIGFVTPFIFKFFLHDKLSGTHIEIIKEAT

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17948; Mature: 17817

Theoretical pI: Translated: 10.82; Mature: 10.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATKKTKKNKTPEKKRALENPLKGLNLSLRLKAFITDIFMIYTPMLYIMTYAILGSAKDF
CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
RENQSAIFLCLLFYALTHSFFIAFKSQSPGMRYARFKLVKNNRKEVGFFLALWRFVLWVL
HHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SMGLLIGFVTPFIFKFFLHDKLSGTHIEIIKEAT
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHEECCC
>Mature Secondary Structure 
ATKKTKKNKTPEKKRALENPLKGLNLSLRLKAFITDIFMIYTPMLYIMTYAILGSAKDF
CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
RENQSAIFLCLLFYALTHSFFIAFKSQSPGMRYARFKLVKNNRKEVGFFLALWRFVLWVL
HHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SMGLLIGFVTPFIFKFFLHDKLSGTHIEIIKEAT
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA