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The map label for this gene is yejB [H]

Identifier: 108563619

GI number: 108563619

Start: 1258663

End: 1259709

Strand: Reverse

Name: yejB [H]

Synonym: HPAG1_1194

Alternate gene names: 108563619

Gene position: 1259709-1258663 (Counterclockwise)

Preceding gene: 108563620

Following gene: 108563618

Centisome position: 78.91

GC content: 41.55

Gene sequence:

>1047_bases
ATGATTGCCTACATCCTTAAACGCTTGCTTTTGATTATCCCTACTTTACTAGCCATCATGACCATTAATTTCTTTCTGAT
CCAATCGGCTCCTGGAGGCCCTATAGAGCAGATGATGGCTAAAATCAATAACACGCAGTCCAAAGAGATTCAAGGCGTTG
TTAAGGATCGCGCCTATAGGGGATCTCAAGGGTTAGAGAGCGATTTGATAGAGAACTTAAAAAAACTCTATGGTTTTGAC
AGACCTATAGGGGAGCGCTACTTTCTCATGCTCAAAAAATACGCGCAATTTGATCTTGGGGAAAGTTTTTACCGCCAGAT
TAAAGTGATAGATTTGATTAAGGAAAAATTGCCGGTATCCATTTCTTTAGGGCTTTTTAGCACGCTTTTGATTTATCTTA
TCTCTATCCCTTTAGGGATTTTCAAGGCCAAACGCAATAACGAGCCTTTAGACGTGCTAAGCAGCGTGGTGATCATTGTC
GCTAACGCTATCCCGGCCTTTTTGTTTGCGGTGGTGTTGATCGTGTTTTTTGCTGGAGGGAATTATTGGCACTGGTTCCC
TTTAAAGGGGCTAGTGAGCGATAATTTTGAAAGTTTGAGCGCGTTAGGCAAAATCAAGGATTATTTATGGCATATCACTT
TGCCCGTTCTTTGCATTTCTTTAGGGGGTTTTGCAAGCCTTACGCTTTTAGTGAAAAACTCTTTTTTAGATGAAATGGGT
AAACTTTATGTGGTGAGCGCTAAGGCTAAGGGCTGTTCAGTGGGGCGTATTTTTTATGCGCATGTGTTCCGCAATGCGAT
TTTATTAGTGGTGGCGGGTTTTCCGCAAGCTTTTTTAGGCATGTTTTTTAGCTCAAGTTTGTTGATAGAGATTGTTTTTA
GCCTGGATGGGTTAGGGCTTTTAGGGTATGAAAGCATTGTGAGTAGGGATTATCCTGTCGTGTTTGGTTCGCTTTATATT
TTCACGCTTTTAGGTTTGGTGGCGAGTTTGATAAGCGATTTGCTCTGCGTGGTGATTGACCCTAGGATTGATTTTGAAAA
GCGTTGA

Upstream 100 bases:

>100_bases
ACAGGATCGCAGCGTATAATTACATTGGCATGCCTGAAGTCAGCCCTAGCTATGGATTTTCGCCGTATTTATGGTGGATA
AAAAAAGAAAGGGGTCCTAA

Downstream 100 bases:

>100_bases
GGGTAGGAATGAAAACTGAGATGAAATATTCTTTAAAACTTTTTGCACAGCCTTTGTTAGTGGTTTTAGCGTTCATGTTG
TTGTATGCTTTAGCGCATGC

Product: oligopeptide ABC transporter, permease protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MIAYILKRLLLIIPTLLAIMTINFFLIQSAPGGPIEQMMAKINNTQSKEIQGVVKDRAYRGSQGLESDLIENLKKLYGFD
RPIGERYFLMLKKYAQFDLGESFYRQIKVIDLIKEKLPVSISLGLFSTLLIYLISIPLGIFKAKRNNEPLDVLSSVVIIV
ANAIPAFLFAVVLIVFFAGGNYWHWFPLKGLVSDNFESLSALGKIKDYLWHITLPVLCISLGGFASLTLLVKNSFLDEMG
KLYVVSAKAKGCSVGRIFYAHVFRNAILLVVAGFPQAFLGMFFSSSLLIEIVFSLDGLGLLGYESIVSRDYPVVFGSLYI
FTLLGLVASLISDLLCVVIDPRIDFEKR

Sequences:

>Translated_348_residues
MIAYILKRLLLIIPTLLAIMTINFFLIQSAPGGPIEQMMAKINNTQSKEIQGVVKDRAYRGSQGLESDLIENLKKLYGFD
RPIGERYFLMLKKYAQFDLGESFYRQIKVIDLIKEKLPVSISLGLFSTLLIYLISIPLGIFKAKRNNEPLDVLSSVVIIV
ANAIPAFLFAVVLIVFFAGGNYWHWFPLKGLVSDNFESLSALGKIKDYLWHITLPVLCISLGGFASLTLLVKNSFLDEMG
KLYVVSAKAKGCSVGRIFYAHVFRNAILLVVAGFPQAFLGMFFSSSLLIEIVFSLDGLGLLGYESIVSRDYPVVFGSLYI
FTLLGLVASLISDLLCVVIDPRIDFEKR
>Mature_348_residues
MIAYILKRLLLIIPTLLAIMTINFFLIQSAPGGPIEQMMAKINNTQSKEIQGVVKDRAYRGSQGLESDLIENLKKLYGFD
RPIGERYFLMLKKYAQFDLGESFYRQIKVIDLIKEKLPVSISLGLFSTLLIYLISIPLGIFKAKRNNEPLDVLSSVVIIV
ANAIPAFLFAVVLIVFFAGGNYWHWFPLKGLVSDNFESLSALGKIKDYLWHITLPVLCISLGGFASLTLLVKNSFLDEMG
KLYVVSAKAKGCSVGRIFYAHVFRNAILLVVAGFPQAFLGMFFSSSLLIEIVFSLDGLGLLGYESIVSRDYPVVFGSLYI
FTLLGLVASLISDLLCVVIDPRIDFEKR

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=364, Percent_Identity=57.967032967033, Blast_Score=422, Evalue=1e-119,
Organism=Escherichia coli, GI1787497, Length=346, Percent_Identity=28.6127167630058, Blast_Score=138, Evalue=6e-34,
Organism=Escherichia coli, GI1789965, Length=363, Percent_Identity=25.3443526170799, Blast_Score=132, Evalue=5e-32,
Organism=Escherichia coli, GI1789888, Length=343, Percent_Identity=27.1137026239067, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI1787053, Length=346, Percent_Identity=26.5895953757225, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1787761, Length=288, Percent_Identity=27.4305555555556, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1787550, Length=269, Percent_Identity=24.1635687732342, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 38822; Mature: 38822

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAYILKRLLLIIPTLLAIMTINFFLIQSAPGGPIEQMMAKINNTQSKEIQGVVKDRAYR
CHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHC
GSQGLESDLIENLKKLYGFDRPIGERYFLMLKKYAQFDLGESFYRQIKVIDLIKEKLPVS
CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCE
ISLGLFSTLLIYLISIPLGIFKAKRNNEPLDVLSSVVIIVANAIPAFLFAVVLIVFFAGG
EEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NYWHWFPLKGLVSDNFESLSALGKIKDYLWHITLPVLCISLGGFASLTLLVKNSFLDEMG
CEEEEECCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
KLYVVSAKAKGCSVGRIFYAHVFRNAILLVVAGFPQAFLGMFFSSSLLIEIVFSLDGLGL
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH
LGYESIVSRDYPVVFGSLYIFTLLGLVASLISDLLCVVIDPRIDFEKR
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MIAYILKRLLLIIPTLLAIMTINFFLIQSAPGGPIEQMMAKINNTQSKEIQGVVKDRAYR
CHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHC
GSQGLESDLIENLKKLYGFDRPIGERYFLMLKKYAQFDLGESFYRQIKVIDLIKEKLPVS
CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCE
ISLGLFSTLLIYLISIPLGIFKAKRNNEPLDVLSSVVIIVANAIPAFLFAVVLIVFFAGG
EEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NYWHWFPLKGLVSDNFESLSALGKIKDYLWHITLPVLCISLGGFASLTLLVKNSFLDEMG
CEEEEECCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
KLYVVSAKAKGCSVGRIFYAHVFRNAILLVVAGFPQAFLGMFFSSSLLIEIVFSLDGLGL
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH
LGYESIVSRDYPVVFGSLYIFTLLGLVASLISDLLCVVIDPRIDFEKR
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]