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The map label for this gene is yejA [C]

Identifier: 108563620

GI number: 108563620

Start: 1259706

End: 1260971

Strand: Reverse

Name: yejA [C]

Synonym: HPAG1_1195

Alternate gene names: 108563620

Gene position: 1260971-1259706 (Counterclockwise)

Preceding gene: 108563621

Following gene: 108563619

Centisome position: 78.99

GC content: 39.89

Gene sequence:

>1266_bases
TTGCCTCTCATTTTAGGGCAGTTGCAAATCTTTTCCAAAAAAGCGTTTCAAAAGGATTATTTCACCAAAAACCCTTTACT
CATTCCTGTTTCTAGCGGCCCTTATGTGATCGCTTCTTTTGATGTGGGCAAGAAAATCACCTACCAAAAAAACCCCAATT
ACTGGGCGAGGAATTTGCCTAGCAGAAAGGGGCAATTCAATTTTGATGAGATCAAATTTGAGTATTATAAAGACGAAACC
ATTGCTTTACAGGCTTTTTTAAGCGGGGCGTATGATTGGCGCCTTGAAAGCACGGCTAAGGTTTGGGCTAGGGGCTATGT
GGGGAAAGCTATAGACAATAAAAAAATCACTAAATACCTAATAGCCCACAAAATGCCAAGCGGCATGCAAGGGTTTTTCT
TCAACACGCGTCGAGAAATTTTTAAGGATAAAAGGGTGCGTGAAGCCTTATTTTATGCGTTTGATTTTGAATGGGCGAAT
AAAAATTTGTTTTTTTCGCAATACAAACGAACCACCAGTTTTTTCAGTAACTCTGTTTATGCATCCCCTCCACTCCCAAG
CCCTGAAGAAAAAGTTCTGTTAGCCCCTTATGAAAAAAGTTTAGATGAAAGGGTTTTTAAAGAGCCTTATGTCGTGCCTA
GAACCGATGGGCCTGATGTTTTGGGCTATAATTTGAGGGAAAATTTAAAATACGCTCAAAACCTTTTAGAGAGTGCGGGC
TTTTCTTACAAAAACATGCGTTTAGTGGATAAAAATAACAAGCCGTTTAGTTTCACTTTGCTTTTAAACAGCCCAGCCTT
TGAAAGACTGGCCCTAGCCTTTGCTAAAAACTTAAGGGTGTTAGGGATTGAAATGAAAATCCAAAGAGTGGATTTAAGCC
AGTATGTCAATCGGATCAAAAGCTATGATTTTGACATGATTGTAGGAGTGATTGGCCAATCGTCTTTCCCGGGTAATGAG
CAGCGCTTTTATTTTGGCTCTTTGAGCGCTAAGGAAAAAGGCACAAGGAATTATGCGGGAATCTCTAGTAAAGCGGTAGA
TGGTTTGATTGAAAAAATCATTAACGCTAAAGATTACAAGGAACAATTAGCTGCCATTCAAGCGATGGATAGGGTGCTGT
TGTGGGGGTTTTATGTGATACCGCATTTTTATTTGCCTAATTACAGGATCGCAGCGTATAATTACATTGGCATGCCTGAA
GTCAGCCCTAGCTATGGATTTTCGCCGTATTTATGGTGGATAAAAAAAGAAAGGGGTCCTAAATGA

Upstream 100 bases:

>100_bases
GATCGCCTATTTATAGGCAGTATTACCAAGATGTTAAAAAGGCGGTTATTTTAGACAAACACCATGTAAATTCATTTTCA
AAACCACTGAAAATAAAGAG

Downstream 100 bases:

>100_bases
TTGCCTACATCCTTAAACGCTTGCTTTTGATTATCCCTACTTTACTAGCCATCATGACCATTAATTTCTTTCTGATCCAA
TCGGCTCCTGGAGGCCCTAT

Product: oligopeptide ABC transporter

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 420

Protein sequence:

>421_residues
MPLILGQLQIFSKKAFQKDYFTKNPLLIPVSSGPYVIASFDVGKKITYQKNPNYWARNLPSRKGQFNFDEIKFEYYKDET
IALQAFLSGAYDWRLESTAKVWARGYVGKAIDNKKITKYLIAHKMPSGMQGFFFNTRREIFKDKRVREALFYAFDFEWAN
KNLFFSQYKRTTSFFSNSVYASPPLPSPEEKVLLAPYEKSLDERVFKEPYVVPRTDGPDVLGYNLRENLKYAQNLLESAG
FSYKNMRLVDKNNKPFSFTLLLNSPAFERLALAFAKNLRVLGIEMKIQRVDLSQYVNRIKSYDFDMIVGVIGQSSFPGNE
QRFYFGSLSAKEKGTRNYAGISSKAVDGLIEKIINAKDYKEQLAAIQAMDRVLLWGFYVIPHFYLPNYRIAAYNYIGMPE
VSPSYGFSPYLWWIKKERGPK

Sequences:

>Translated_421_residues
MPLILGQLQIFSKKAFQKDYFTKNPLLIPVSSGPYVIASFDVGKKITYQKNPNYWARNLPSRKGQFNFDEIKFEYYKDET
IALQAFLSGAYDWRLESTAKVWARGYVGKAIDNKKITKYLIAHKMPSGMQGFFFNTRREIFKDKRVREALFYAFDFEWAN
KNLFFSQYKRTTSFFSNSVYASPPLPSPEEKVLLAPYEKSLDERVFKEPYVVPRTDGPDVLGYNLRENLKYAQNLLESAG
FSYKNMRLVDKNNKPFSFTLLLNSPAFERLALAFAKNLRVLGIEMKIQRVDLSQYVNRIKSYDFDMIVGVIGQSSFPGNE
QRFYFGSLSAKEKGTRNYAGISSKAVDGLIEKIINAKDYKEQLAAIQAMDRVLLWGFYVIPHFYLPNYRIAAYNYIGMPE
VSPSYGFSPYLWWIKKERGPK
>Mature_420_residues
PLILGQLQIFSKKAFQKDYFTKNPLLIPVSSGPYVIASFDVGKKITYQKNPNYWARNLPSRKGQFNFDEIKFEYYKDETI
ALQAFLSGAYDWRLESTAKVWARGYVGKAIDNKKITKYLIAHKMPSGMQGFFFNTRREIFKDKRVREALFYAFDFEWANK
NLFFSQYKRTTSFFSNSVYASPPLPSPEEKVLLAPYEKSLDERVFKEPYVVPRTDGPDVLGYNLRENLKYAQNLLESAGF
SYKNMRLVDKNNKPFSFTLLLNSPAFERLALAFAKNLRVLGIEMKIQRVDLSQYVNRIKSYDFDMIVGVIGQSSFPGNEQ
RFYFGSLSAKEKGTRNYAGISSKAVDGLIEKIINAKDYKEQLAAIQAMDRVLLWGFYVIPHFYLPNYRIAAYNYIGMPEV
SPSYGFSPYLWWIKKERGPK

Specific function: Unknown

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87082063, Length=422, Percent_Identity=38.3886255924171, Blast_Score=281, Evalue=6e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 48849; Mature: 48718

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLILGQLQIFSKKAFQKDYFTKNPLLIPVSSGPYVIASFDVGKKITYQKNPNYWARNLP
CCEEEHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCEEEEECCCCHHHHCCC
SRKGQFNFDEIKFEYYKDETIALQAFLSGAYDWRLESTAKVWARGYVGKAIDNKKITKYL
CCCCCCCHHHEEEEEECCCHHHHHHHHCCCCCEEECHHHHHHHHCCCCCCCCCHHHHHHH
IAHKMPSGMQGFFFNTRREIFKDKRVREALFYAFDFEWANKNLFFSQYKRTTSFFSNSVY
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEHHHHHHHHHHHCCCEE
ASPPLPSPEEKVLLAPYEKSLDERVFKEPYVVPRTDGPDVLGYNLRENLKYAQNLLESAG
ECCCCCCCCCCEEECCHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCC
FSYKNMRLVDKNNKPFSFTLLLNSPAFERLALAFAKNLRVLGIEMKIQRVDLSQYVNRIK
CCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHHCCCEEEEEEEEEEEECHHHHHHHHH
SYDFDMIVGVIGQSSFPGNEQRFYFGSLSAKEKGTRNYAGISSKAVDGLIEKIINAKDYK
CCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHH
EQLAAIQAMDRVLLWGFYVIPHFYLPNYRIAAYNYIGMPEVSPSYGFSPYLWWIKKERGP
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCC
K
C
>Mature Secondary Structure 
PLILGQLQIFSKKAFQKDYFTKNPLLIPVSSGPYVIASFDVGKKITYQKNPNYWARNLP
CEEEHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCEEEEECCCCHHHHCCC
SRKGQFNFDEIKFEYYKDETIALQAFLSGAYDWRLESTAKVWARGYVGKAIDNKKITKYL
CCCCCCCHHHEEEEEECCCHHHHHHHHCCCCCEEECHHHHHHHHCCCCCCCCCHHHHHHH
IAHKMPSGMQGFFFNTRREIFKDKRVREALFYAFDFEWANKNLFFSQYKRTTSFFSNSVY
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEHHHHHHHHHHHCCCEE
ASPPLPSPEEKVLLAPYEKSLDERVFKEPYVVPRTDGPDVLGYNLRENLKYAQNLLESAG
ECCCCCCCCCCEEECCHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCC
FSYKNMRLVDKNNKPFSFTLLLNSPAFERLALAFAKNLRVLGIEMKIQRVDLSQYVNRIK
CCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHHCCCEEEEEEEEEEEECHHHHHHHHH
SYDFDMIVGVIGQSSFPGNEQRFYFGSLSAKEKGTRNYAGISSKAVDGLIEKIINAKDYK
CCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHH
EQLAAIQAMDRVLLWGFYVIPHFYLPNYRIAAYNYIGMPEVSPSYGFSPYLWWIKKERGP
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA