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The map label for this gene is 108563514

Identifier: 108563514

GI number: 108563514

Start: 1143571

End: 1143894

Strand: Reverse

Name: 108563514

Synonym: HPAG1_1089

Alternate gene names: NA

Gene position: 1143894-1143571 (Counterclockwise)

Preceding gene: 108563515

Following gene: 108563513

Centisome position: 71.66

GC content: 40.12

Gene sequence:

>324_bases
ATGCGCGAATTAGATCCTTTGAACACGCCTTTTTCTCAAGCTGATTGTAAGGACTATTCGTATTGCGTGGCAACTTTTTT
AGAAAAATATTTAAAAAAGGTTGTGTCTTTCCCGCAAGCTTTGAGCGTAGAGCACACGCTTTTAGAAGATAAAGTCAAAC
AAATCACTATTTATACCCACCCATCAGACATGGGGCATGTGATCGGTAAAGAGGGCAAAATGGTGAGCGCGATTAAGGCG
TTTGTTTCTGGTGTGAAAGCCAAAGACGGGTTTTCTTATAAAATCGTTGTTTTTGCCAGTAAAAATAGCGATCAAACGCC
TTGA

Upstream 100 bases:

>100_bases
ATTGATAAGGAACGCTTGAATTACTGGAAAAGCGTAGGGGCTAAAATGAGCGAGAGGGTGGAAAAACTTTCTCAAAAAGC
CTAAGGTTTTGTGAGGCTAG

Downstream 100 bases:

>100_bases
ATGGTTTCTATGCTTTTAGTGGGCAGAATTGGTAAAAGCGTGGGGCTTAATGGGGGGTTAAAGCTTCATTTAGAGAGCGA
TTTTCCAGAGTGCTTAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MRELDPLNTPFSQADCKDYSYCVATFLEKYLKKVVSFPQALSVEHTLLEDKVKQITIYTHPSDMGHVIGKEGKMVSAIKA
FVSGVKAKDGFSYKIVVFASKNSDQTP

Sequences:

>Translated_107_residues
MRELDPLNTPFSQADCKDYSYCVATFLEKYLKKVVSFPQALSVEHTLLEDKVKQITIYTHPSDMGHVIGKEGKMVSAIKA
FVSGVKAKDGFSYKIVVFASKNSDQTP
>Mature_107_residues
MRELDPLNTPFSQADCKDYSYCVATFLEKYLKKVVSFPQALSVEHTLLEDKVKQITIYTHPSDMGHVIGKEGKMVSAIKA
FVSGVKAKDGFSYKIVVFASKNSDQTP

Specific function: Unknown

COG id: COG1837

COG function: function code R; Predicted RNA-binding protein (contains KH domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11937; Mature: 11937

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRELDPLNTPFSQADCKDYSYCVATFLEKYLKKVVSFPQALSVEHTLLEDKVKQITIYTH
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHEEEEEEC
PSDMGHVIGKEGKMVSAIKAFVSGVKAKDGFSYKIVVFASKNSDQTP
CCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCC
>Mature Secondary Structure
MRELDPLNTPFSQADCKDYSYCVATFLEKYLKKVVSFPQALSVEHTLLEDKVKQITIYTH
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHEEEEEEC
PSDMGHVIGKEGKMVSAIKAFVSGVKAKDGFSYKIVVFASKNSDQTP
CCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA