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The map label for this gene is porD [H]

Identifier: 108563473

GI number: 108563473

Start: 1103818

End: 1104210

Strand: Direct

Name: porD [H]

Synonym: HPAG1_1048

Alternate gene names: 108563473

Gene position: 1103818-1104210 (Clockwise)

Preceding gene: 108563472

Following gene: 108563474

Centisome position: 69.15

GC content: 43.26

Gene sequence:

>393_bases
ATGAAAGATTGGAATGAATTTGAAATGGGAGCGGTGCTCTTCCCTTTTGAAAAAAACGCACAAAGCGAAATGGAAAAACA
CAATGATGAGCGCCATTACACCGAACAAAGCTACTTCACCACTTCAGTGGCTCATTGGCGCGTGGCTAAGCCTGTGCATA
ACAATAATATTTGCATCAATTGCTTTAATTGTTGGGTTTATTGCCCAGACGCTGCCATTCTTTCAAGAGAGGGCAAATTA
AAAGGCGTGGATTATTCTCATTGTAAAGGCTGTGGCGTGTGCGTGGATGTCTGCCCCACCAACCCTAAATCGCTATGGAT
GTTTGAAGAACAAATTGAGCCCGCTACCGCCCTCACTCAATGGCCGCAAAAACAAGAAAAGAAAAAATCATAA

Upstream 100 bases:

>100_bases
GAAAGTTTTAGGCAAAAAACTCACGCAAGAAGTCATTGACGCTAACATGCTCGCTATCCAAAGAGCTTATGAAGAAGTTC
AATAACATTAAGGATTAAAG

Downstream 100 bases:

>100_bases
GGAAAGAATATGGCAAGAAGTATTGAATTGCAAGAGATAGAAGTGTGGGATGGCAATACCGCTAGTTCTAACGCTTTAAG
ACAGGCTCAAATTGATGTCA

Product: pyruvate flavodoxin oxidoreductase subunit delta

Products: acetyl-CoA; CO2; reduced ferredoxin

Alternate protein names: Pyruvate oxidoreductase delta chain; POR; Pyruvic-ferredoxin oxidoreductase subunit delta [H]

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MKDWNEFEMGAVLFPFEKNAQSEMEKHNDERHYTEQSYFTTSVAHWRVAKPVHNNNICINCFNCWVYCPDAAILSREGKL
KGVDYSHCKGCGVCVDVCPTNPKSLWMFEEQIEPATALTQWPQKQEKKKS

Sequences:

>Translated_130_residues
MKDWNEFEMGAVLFPFEKNAQSEMEKHNDERHYTEQSYFTTSVAHWRVAKPVHNNNICINCFNCWVYCPDAAILSREGKL
KGVDYSHCKGCGVCVDVCPTNPKSLWMFEEQIEPATALTQWPQKQEKKKS
>Mature_130_residues
MKDWNEFEMGAVLFPFEKNAQSEMEKHNDERHYTEQSYFTTSVAHWRVAKPVHNNNICINCFNCWVYCPDAAILSREGKL
KGVDYSHCKGCGVCVDVCPTNPKSLWMFEEQIEPATALTQWPQKQEKKKS

Specific function: Unknown

COG id: COG1144

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011898 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: 1.2.7.1

Molecular weight: Translated: 15108; Mature: 15108

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
9.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDWNEFEMGAVLFPFEKNAQSEMEKHNDERHYTEQSYFTTSVAHWRVAKPVHNNNICIN
CCCCCCCCCCEEEECCCCCCHHHHHHCCCCCCCCCCHHEEEHHCCEEEECCCCCCCEEEE
CFNCWVYCPDAAILSREGKLKGVDYSHCKGCGVCVDVCPTNPKSLWMFEEQIEPATALTQ
EEEEEEECCCHHEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEHHHCCCHHHHHH
WPQKQEKKKS
CCCCHHHCCC
>Mature Secondary Structure
MKDWNEFEMGAVLFPFEKNAQSEMEKHNDERHYTEQSYFTTSVAHWRVAKPVHNNNICIN
CCCCCCCCCCEEEECCCCCCHHHHHHCCCCCCCCCCHHEEEHHCCEEEECCCCCCCEEEE
CFNCWVYCPDAAILSREGKLKGVDYSHCKGCGVCVDVCPTNPKSLWMFEEQIEPATALTQ
EEEEEEECCCHHEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEHHHCCCHHHHHH
WPQKQEKKKS
CCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: pyruvate; CoA; oxidized ferredoxin

Specific reaction: pyruvate + CoA + oxidized ferredoxin = acetyl-CoA + CO2 + reduced ferredoxin

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8550425; 10360571 [H]