Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
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Accession | NC_008086 |
Length | 1,596,366 |
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The map label for this gene is porA [H]
Identifier: 108563474
GI number: 108563474
Start: 1104220
End: 1105443
Strand: Direct
Name: porA [H]
Synonym: HPAG1_1049
Alternate gene names: 108563474
Gene position: 1104220-1105443 (Clockwise)
Preceding gene: 108563473
Following gene: 108563475
Centisome position: 69.17
GC content: 45.1
Gene sequence:
>1224_bases ATGGCAAGAAGTATTGAATTGCAAGAGATAGAAGTGTGGGATGGCAATACCGCTAGTTCTAACGCTTTAAGACAGGCTCA AATTGATGTCATCGCAGCCTATCCTATCACCCCATCAACGCCCATTGTGCAAAATTATGGCTCGTTTAAGGATAATGGCT ATATTGATGGCGAATTTGTTTTAGTGGAATCTGAGCATGCCGCCATGAGCGCATGCGTGGGAGCTGCTGCAGCAGGTGGA AGGGTTAGCACTGCGACTAGCTCTCAAGGTTTGGCGCTAATGGTAGAGGTTTTATACCAGGCTTCTGGCATGCGTTTGCC TATTGTTTTGAATTTAGTCAATCGCGCTCTAGCAGCCCCTTTAAATATCCATGGCGATCATTCTGATATGTATTTAAGCA GGGATTCTGGCTGGATAAGTTTATGCACATGCAACCCCCAAGAAGCTTATGATTTCACTTTAATGGCGTTTAGAATCGCA GAGCATCAAAAGGTGCGCGTGCCTACTATTGTCAATCAAGACGGGTTTTTATGCTCGCACACCGTGCAAAATGTCCGCCC TTTGAGCGATGCAGTGGCTTATCAATTCGTAGGCGAATACCAAACCAAGCATTCCCTTTTGGATTTTGATAAACCGGTAA GCTATGGCGCGCAAGCTGAAGAAGAATGGCATTATGAGCATAAGGCCCAACTCCATCATGCGATCATGAGCGCTTCTTCT GTGATTGAAGAAGTGTTCAATGATTTCGCTAAACTCACAGGCAGACAATACCATTTGACTAAAACTTTCCAGCTAGAAGA CGCTGAAATCGCTATCTTTGCGTTAGGCACTACTTATGAATCAGCGATCGTAGCGGCTAAGGAAATGCGTAAAAAAGGCA TTAAGGCCGGCGTGGCCACCATCCATTCTCTGCGCCCTTTCCCTTATGAAAGATTAGGGCAGGATTTGAAAAATCTTAAA GCTTTAGCGATTTTAGACAAGAGCTCTCCAGCGGGTGCTATGGGGGCGATGTTTAATGAAGTAACGAGTGCGGTGTATCA AACGCAAGGGACTAAACACCCCGTGGTGTCTAACTACATTTATGGTTTAGGCGAAAGGGATATGACCATCGCGCATTTAT GCGAAATTTTTGAAGAAATCAATGAAGACGCTCTTAAAGGCACGCTCACGCACCCTACCCAACAATTCGTAGGCTTGCAC GGCCCTAAAATGAGCTTTTTTTAA
Upstream 100 bases:
>100_bases CCCTAAATCGCTATGGATGTTTGAAGAACAAATTGAGCCCGCTACCGCCCTCACTCAATGGCCGCAAAAACAAGAAAAGA AAAAATCATAAGGAAAGAAT
Downstream 100 bases:
>100_bases AAAGGAAATATCATGGTAAAAGAAGTCAAAACACTCAAAGGTTTTAGCCAAAGCGCTGAGAAGTTTCAAGGCTCGCACTT GCTTTGCCCGGGTTGTGGGC
Product: pyruvate flavodoxin oxidoreductase subunit alpha
Products: NA
Alternate protein names: Pyruvate oxidoreductase alpha chain; POR; Pyruvic-ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MARSIELQEIEVWDGNTASSNALRQAQIDVIAAYPITPSTPIVQNYGSFKDNGYIDGEFVLVESEHAAMSACVGAAAAGG RVSTATSSQGLALMVEVLYQASGMRLPIVLNLVNRALAAPLNIHGDHSDMYLSRDSGWISLCTCNPQEAYDFTLMAFRIA EHQKVRVPTIVNQDGFLCSHTVQNVRPLSDAVAYQFVGEYQTKHSLLDFDKPVSYGAQAEEEWHYEHKAQLHHAIMSASS VIEEVFNDFAKLTGRQYHLTKTFQLEDAEIAIFALGTTYESAIVAAKEMRKKGIKAGVATIHSLRPFPYERLGQDLKNLK ALAILDKSSPAGAMGAMFNEVTSAVYQTQGTKHPVVSNYIYGLGERDMTIAHLCEIFEEINEDALKGTLTHPTQQFVGLH GPKMSFF
Sequences:
>Translated_407_residues MARSIELQEIEVWDGNTASSNALRQAQIDVIAAYPITPSTPIVQNYGSFKDNGYIDGEFVLVESEHAAMSACVGAAAAGG RVSTATSSQGLALMVEVLYQASGMRLPIVLNLVNRALAAPLNIHGDHSDMYLSRDSGWISLCTCNPQEAYDFTLMAFRIA EHQKVRVPTIVNQDGFLCSHTVQNVRPLSDAVAYQFVGEYQTKHSLLDFDKPVSYGAQAEEEWHYEHKAQLHHAIMSASS VIEEVFNDFAKLTGRQYHLTKTFQLEDAEIAIFALGTTYESAIVAAKEMRKKGIKAGVATIHSLRPFPYERLGQDLKNLK ALAILDKSSPAGAMGAMFNEVTSAVYQTQGTKHPVVSNYIYGLGERDMTIAHLCEIFEEINEDALKGTLTHPTQQFVGLH GPKMSFF >Mature_406_residues ARSIELQEIEVWDGNTASSNALRQAQIDVIAAYPITPSTPIVQNYGSFKDNGYIDGEFVLVESEHAAMSACVGAAAAGGR VSTATSSQGLALMVEVLYQASGMRLPIVLNLVNRALAAPLNIHGDHSDMYLSRDSGWISLCTCNPQEAYDFTLMAFRIAE HQKVRVPTIVNQDGFLCSHTVQNVRPLSDAVAYQFVGEYQTKHSLLDFDKPVSYGAQAEEEWHYEHKAQLHHAIMSASSV IEEVFNDFAKLTGRQYHLTKTFQLEDAEIAIFALGTTYESAIVAAKEMRKKGIKAGVATIHSLRPFPYERLGQDLKNLKA LAILDKSSPAGAMGAMFNEVTSAVYQTQGTKHPVVSNYIYGLGERDMTIAHLCEIFEEINEDALKGTLTHPTQQFVGLHG PKMSFF
Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]
COG id: COG0674
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787642, Length=393, Percent_Identity=30.7888040712468, Blast_Score=157, Evalue=2e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002880 - InterPro: IPR009014 - InterPro: IPR015941 [H]
Pfam domain/function: PF01855 POR_N [H]
EC number: =1.2.7.1 [H]
Molecular weight: Translated: 44756; Mature: 44625
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: PS00099 THIOLASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARSIELQEIEVWDGNTASSNALRQAQIDVIAAYPITPSTPIVQNYGSFKDNGYIDGEFV CCCCCEEEEEEEECCCCCCCHHHHHEEEEEEEEECCCCCCCHHHCCCCCCCCCEECCEEE LVESEHAAMSACVGAAAAGGRVSTATSSQGLALMVEVLYQASGMRLPIVLNLVNRALAAP EEECCHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC LNIHGDHSDMYLSRDSGWISLCTCNPQEAYDFTLMAFRIAEHQKVRVPTIVNQDGFLCSH CEECCCCCCEEEECCCCEEEEEECCCCHHHHHHHEEEEHHCCCEEECCEEECCCCCCHHH TVQNVRPLSDAVAYQFVGEYQTKHSLLDFDKPVSYGAQAEEEWHYEHKAQLHHAIMSASS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VIEEVFNDFAKLTGRQYHLTKTFQLEDAEIAIFALGTTYESAIVAAKEMRKKGIKAGVAT HHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH IHSLRPFPYERLGQDLKNLKALAILDKSSPAGAMGAMFNEVTSAVYQTQGTKHPVVSNYI HHHCCCCCHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHH YGLGERDMTIAHLCEIFEEINEDALKGTLTHPTQQFVGLHGPKMSFF HCCCCCCHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHCCCCCCCCCC >Mature Secondary Structure ARSIELQEIEVWDGNTASSNALRQAQIDVIAAYPITPSTPIVQNYGSFKDNGYIDGEFV CCCCEEEEEEEECCCCCCCHHHHHEEEEEEEEECCCCCCCHHHCCCCCCCCCEECCEEE LVESEHAAMSACVGAAAAGGRVSTATSSQGLALMVEVLYQASGMRLPIVLNLVNRALAAP EEECCHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC LNIHGDHSDMYLSRDSGWISLCTCNPQEAYDFTLMAFRIAEHQKVRVPTIVNQDGFLCSH CEECCCCCCEEEECCCCEEEEEECCCCHHHHHHHEEEEHHCCCEEECCEEECCCCCCHHH TVQNVRPLSDAVAYQFVGEYQTKHSLLDFDKPVSYGAQAEEEWHYEHKAQLHHAIMSASS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VIEEVFNDFAKLTGRQYHLTKTFQLEDAEIAIFALGTTYESAIVAAKEMRKKGIKAGVAT HHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH IHSLRPFPYERLGQDLKNLKALAILDKSSPAGAMGAMFNEVTSAVYQTQGTKHPVVSNYI HHHCCCCCHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHH YGLGERDMTIAHLCEIFEEINEDALKGTLTHPTQQFVGLHGPKMSFF HCCCCCCHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8550425; 10360571; 8305426 [H]