Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is porA [H]

Identifier: 108563474

GI number: 108563474

Start: 1104220

End: 1105443

Strand: Direct

Name: porA [H]

Synonym: HPAG1_1049

Alternate gene names: 108563474

Gene position: 1104220-1105443 (Clockwise)

Preceding gene: 108563473

Following gene: 108563475

Centisome position: 69.17

GC content: 45.1

Gene sequence:

>1224_bases
ATGGCAAGAAGTATTGAATTGCAAGAGATAGAAGTGTGGGATGGCAATACCGCTAGTTCTAACGCTTTAAGACAGGCTCA
AATTGATGTCATCGCAGCCTATCCTATCACCCCATCAACGCCCATTGTGCAAAATTATGGCTCGTTTAAGGATAATGGCT
ATATTGATGGCGAATTTGTTTTAGTGGAATCTGAGCATGCCGCCATGAGCGCATGCGTGGGAGCTGCTGCAGCAGGTGGA
AGGGTTAGCACTGCGACTAGCTCTCAAGGTTTGGCGCTAATGGTAGAGGTTTTATACCAGGCTTCTGGCATGCGTTTGCC
TATTGTTTTGAATTTAGTCAATCGCGCTCTAGCAGCCCCTTTAAATATCCATGGCGATCATTCTGATATGTATTTAAGCA
GGGATTCTGGCTGGATAAGTTTATGCACATGCAACCCCCAAGAAGCTTATGATTTCACTTTAATGGCGTTTAGAATCGCA
GAGCATCAAAAGGTGCGCGTGCCTACTATTGTCAATCAAGACGGGTTTTTATGCTCGCACACCGTGCAAAATGTCCGCCC
TTTGAGCGATGCAGTGGCTTATCAATTCGTAGGCGAATACCAAACCAAGCATTCCCTTTTGGATTTTGATAAACCGGTAA
GCTATGGCGCGCAAGCTGAAGAAGAATGGCATTATGAGCATAAGGCCCAACTCCATCATGCGATCATGAGCGCTTCTTCT
GTGATTGAAGAAGTGTTCAATGATTTCGCTAAACTCACAGGCAGACAATACCATTTGACTAAAACTTTCCAGCTAGAAGA
CGCTGAAATCGCTATCTTTGCGTTAGGCACTACTTATGAATCAGCGATCGTAGCGGCTAAGGAAATGCGTAAAAAAGGCA
TTAAGGCCGGCGTGGCCACCATCCATTCTCTGCGCCCTTTCCCTTATGAAAGATTAGGGCAGGATTTGAAAAATCTTAAA
GCTTTAGCGATTTTAGACAAGAGCTCTCCAGCGGGTGCTATGGGGGCGATGTTTAATGAAGTAACGAGTGCGGTGTATCA
AACGCAAGGGACTAAACACCCCGTGGTGTCTAACTACATTTATGGTTTAGGCGAAAGGGATATGACCATCGCGCATTTAT
GCGAAATTTTTGAAGAAATCAATGAAGACGCTCTTAAAGGCACGCTCACGCACCCTACCCAACAATTCGTAGGCTTGCAC
GGCCCTAAAATGAGCTTTTTTTAA

Upstream 100 bases:

>100_bases
CCCTAAATCGCTATGGATGTTTGAAGAACAAATTGAGCCCGCTACCGCCCTCACTCAATGGCCGCAAAAACAAGAAAAGA
AAAAATCATAAGGAAAGAAT

Downstream 100 bases:

>100_bases
AAAGGAAATATCATGGTAAAAGAAGTCAAAACACTCAAAGGTTTTAGCCAAAGCGCTGAGAAGTTTCAAGGCTCGCACTT
GCTTTGCCCGGGTTGTGGGC

Product: pyruvate flavodoxin oxidoreductase subunit alpha

Products: NA

Alternate protein names: Pyruvate oxidoreductase alpha chain; POR; Pyruvic-ferredoxin oxidoreductase subunit alpha [H]

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MARSIELQEIEVWDGNTASSNALRQAQIDVIAAYPITPSTPIVQNYGSFKDNGYIDGEFVLVESEHAAMSACVGAAAAGG
RVSTATSSQGLALMVEVLYQASGMRLPIVLNLVNRALAAPLNIHGDHSDMYLSRDSGWISLCTCNPQEAYDFTLMAFRIA
EHQKVRVPTIVNQDGFLCSHTVQNVRPLSDAVAYQFVGEYQTKHSLLDFDKPVSYGAQAEEEWHYEHKAQLHHAIMSASS
VIEEVFNDFAKLTGRQYHLTKTFQLEDAEIAIFALGTTYESAIVAAKEMRKKGIKAGVATIHSLRPFPYERLGQDLKNLK
ALAILDKSSPAGAMGAMFNEVTSAVYQTQGTKHPVVSNYIYGLGERDMTIAHLCEIFEEINEDALKGTLTHPTQQFVGLH
GPKMSFF

Sequences:

>Translated_407_residues
MARSIELQEIEVWDGNTASSNALRQAQIDVIAAYPITPSTPIVQNYGSFKDNGYIDGEFVLVESEHAAMSACVGAAAAGG
RVSTATSSQGLALMVEVLYQASGMRLPIVLNLVNRALAAPLNIHGDHSDMYLSRDSGWISLCTCNPQEAYDFTLMAFRIA
EHQKVRVPTIVNQDGFLCSHTVQNVRPLSDAVAYQFVGEYQTKHSLLDFDKPVSYGAQAEEEWHYEHKAQLHHAIMSASS
VIEEVFNDFAKLTGRQYHLTKTFQLEDAEIAIFALGTTYESAIVAAKEMRKKGIKAGVATIHSLRPFPYERLGQDLKNLK
ALAILDKSSPAGAMGAMFNEVTSAVYQTQGTKHPVVSNYIYGLGERDMTIAHLCEIFEEINEDALKGTLTHPTQQFVGLH
GPKMSFF
>Mature_406_residues
ARSIELQEIEVWDGNTASSNALRQAQIDVIAAYPITPSTPIVQNYGSFKDNGYIDGEFVLVESEHAAMSACVGAAAAGGR
VSTATSSQGLALMVEVLYQASGMRLPIVLNLVNRALAAPLNIHGDHSDMYLSRDSGWISLCTCNPQEAYDFTLMAFRIAE
HQKVRVPTIVNQDGFLCSHTVQNVRPLSDAVAYQFVGEYQTKHSLLDFDKPVSYGAQAEEEWHYEHKAQLHHAIMSASSV
IEEVFNDFAKLTGRQYHLTKTFQLEDAEIAIFALGTTYESAIVAAKEMRKKGIKAGVATIHSLRPFPYERLGQDLKNLKA
LAILDKSSPAGAMGAMFNEVTSAVYQTQGTKHPVVSNYIYGLGERDMTIAHLCEIFEEINEDALKGTLTHPTQQFVGLHG
PKMSFF

Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]

COG id: COG0674

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787642, Length=393, Percent_Identity=30.7888040712468, Blast_Score=157, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002880
- InterPro:   IPR009014
- InterPro:   IPR015941 [H]

Pfam domain/function: PF01855 POR_N [H]

EC number: =1.2.7.1 [H]

Molecular weight: Translated: 44756; Mature: 44625

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: PS00099 THIOLASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARSIELQEIEVWDGNTASSNALRQAQIDVIAAYPITPSTPIVQNYGSFKDNGYIDGEFV
CCCCCEEEEEEEECCCCCCCHHHHHEEEEEEEEECCCCCCCHHHCCCCCCCCCEECCEEE
LVESEHAAMSACVGAAAAGGRVSTATSSQGLALMVEVLYQASGMRLPIVLNLVNRALAAP
EEECCHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
LNIHGDHSDMYLSRDSGWISLCTCNPQEAYDFTLMAFRIAEHQKVRVPTIVNQDGFLCSH
CEECCCCCCEEEECCCCEEEEEECCCCHHHHHHHEEEEHHCCCEEECCEEECCCCCCHHH
TVQNVRPLSDAVAYQFVGEYQTKHSLLDFDKPVSYGAQAEEEWHYEHKAQLHHAIMSASS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VIEEVFNDFAKLTGRQYHLTKTFQLEDAEIAIFALGTTYESAIVAAKEMRKKGIKAGVAT
HHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
IHSLRPFPYERLGQDLKNLKALAILDKSSPAGAMGAMFNEVTSAVYQTQGTKHPVVSNYI
HHHCCCCCHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHH
YGLGERDMTIAHLCEIFEEINEDALKGTLTHPTQQFVGLHGPKMSFF
HCCCCCCHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHCCCCCCCCCC
>Mature Secondary Structure 
ARSIELQEIEVWDGNTASSNALRQAQIDVIAAYPITPSTPIVQNYGSFKDNGYIDGEFV
CCCCEEEEEEEECCCCCCCHHHHHEEEEEEEEECCCCCCCHHHCCCCCCCCCEECCEEE
LVESEHAAMSACVGAAAAGGRVSTATSSQGLALMVEVLYQASGMRLPIVLNLVNRALAAP
EEECCHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
LNIHGDHSDMYLSRDSGWISLCTCNPQEAYDFTLMAFRIAEHQKVRVPTIVNQDGFLCSH
CEECCCCCCEEEECCCCEEEEEECCCCHHHHHHHEEEEHHCCCEEECCEEECCCCCCHHH
TVQNVRPLSDAVAYQFVGEYQTKHSLLDFDKPVSYGAQAEEEWHYEHKAQLHHAIMSASS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VIEEVFNDFAKLTGRQYHLTKTFQLEDAEIAIFALGTTYESAIVAAKEMRKKGIKAGVAT
HHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
IHSLRPFPYERLGQDLKNLKALAILDKSSPAGAMGAMFNEVTSAVYQTQGTKHPVVSNYI
HHHCCCCCHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHH
YGLGERDMTIAHLCEIFEEINEDALKGTLTHPTQQFVGLHGPKMSFF
HCCCCCCHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8550425; 10360571; 8305426 [H]