Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
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Accession | NC_008086 |
Length | 1,596,366 |
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The map label for this gene is 108563450
Identifier: 108563450
GI number: 108563450
Start: 1080435
End: 1080743
Strand: Direct
Name: 108563450
Synonym: HPAG1_1025
Alternate gene names: NA
Gene position: 1080435-1080743 (Clockwise)
Preceding gene: 108563449
Following gene: 108563451
Centisome position: 67.68
GC content: 32.69
Gene sequence:
>309_bases ATGGACTTAGAACAAACTTTTTTAAAAATTATTGAAAAAAAACATGAAGAATTGAATTTAGGGCAAGATTACAACGCTAT TTTTTCAAAAATTAGAGATTTTGAAGCCAACGCTATAGGGCAGATTGGTGAAGAGTTTTTAAAAAGCGTGCTTAACGCTA TAGATGGAGTGATCAATGATGGCATTATTCATGATGAATACGATATTATGACAAAAAGCGGTGTGTCCTTTGAAGTTAAA ACAGCGCGAAAAGGCAGAACTAACAACACTTTTTTAGTTCAATGGTATAAACCCACGATACAACTATGA
Upstream 100 bases:
>100_bases CAAAATACGCAAGTTTAGCGACTAATTCTTGCTATCATTTAGGAAAAAGCCATATTTTTCAAGCCTTATACGATCATTTG GATAGTTTAAAGGATAATTG
Downstream 100 bases:
>100_bases TTTTTTGATTTGCTTAGGAGTGTGCGAAGACCAATTGCTTTATAGAATTTTTAAAAAAGATGAAATCCATTACATTCATA AAGAAAGAAAATACTTTATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MDLEQTFLKIIEKKHEELNLGQDYNAIFSKIRDFEANAIGQIGEEFLKSVLNAIDGVINDGIIHDEYDIMTKSGVSFEVK TARKGRTNNTFLVQWYKPTIQL
Sequences:
>Translated_102_residues MDLEQTFLKIIEKKHEELNLGQDYNAIFSKIRDFEANAIGQIGEEFLKSVLNAIDGVINDGIIHDEYDIMTKSGVSFEVK TARKGRTNNTFLVQWYKPTIQL >Mature_102_residues MDLEQTFLKIIEKKHEELNLGQDYNAIFSKIRDFEANAIGQIGEEFLKSVLNAIDGVINDGIIHDEYDIMTKSGVSFEVK TARKGRTNNTFLVQWYKPTIQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11708; Mature: 11708
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLEQTFLKIIEKKHEELNLGQDYNAIFSKIRDFEANAIGQIGEEFLKSVLNAIDGVIND CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC GIIHDEYDIMTKSGVSFEVKTARKGRTNNTFLVQWYKPTIQL CCCCCCHHHHCCCCCCEEEECCCCCCCCCEEEEEECCCCCCC >Mature Secondary Structure MDLEQTFLKIIEKKHEELNLGQDYNAIFSKIRDFEANAIGQIGEEFLKSVLNAIDGVIND CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC GIIHDEYDIMTKSGVSFEVKTARKGRTNNTFLVQWYKPTIQL CCCCCCHHHHCCCCCCEEEECCCCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA