Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108563449

Identifier: 108563449

GI number: 108563449

Start: 1080265

End: 1080435

Strand: Direct

Name: 108563449

Synonym: HPAG1_1024

Alternate gene names: NA

Gene position: 1080265-1080435 (Clockwise)

Preceding gene: 108563448

Following gene: 108563450

Centisome position: 67.67

GC content: 30.41

Gene sequence:

>171_bases
GTGGTATTTACTAGCACTAACAAGGCTTTAAACGCTAAATTAAAAAAACTATTCAAAGAGATTGATTGGACAAAATACGC
AAGTTTAGCGACTAATTCTTGCTATCATTTAGGAAAAAGCCATATTTTTCAAGCCTTATACGATCATTTGGATAGTTTAA
AGGATAATTGA

Upstream 100 bases:

>100_bases
TTTTTAATCAAAAAGCGTCTTTTTACATTTCATCAACTTTTTATAAAAGCACACAAATTGTAGAGAACTTTGAGGAAGTT
AAGTATAATCTGGTATTGCT

Downstream 100 bases:

>100_bases
TGGACTTAGAACAAACTTTTTTAAAAATTATTGAAAAAAAACATGAAGAATTGAATTTAGGGCAAGATTACAACGCTATT
TTTTCAAAAATTAGAGATTT

Product: putative type II DNA modification enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 56; Mature: 56

Protein sequence:

>56_residues
MVFTSTNKALNAKLKKLFKEIDWTKYASLATNSCYHLGKSHIFQALYDHLDSLKDN

Sequences:

>Translated_56_residues
MVFTSTNKALNAKLKKLFKEIDWTKYASLATNSCYHLGKSHIFQALYDHLDSLKDN
>Mature_56_residues
MVFTSTNKALNAKLKKLFKEIDWTKYASLATNSCYHLGKSHIFQALYDHLDSLKDN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6463; Mature: 6463

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFTSTNKALNAKLKKLFKEIDWTKYASLATNSCYHLGKSHIFQALYDHLDSLKDN
CCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVFTSTNKALNAKLKKLFKEIDWTKYASLATNSCYHLGKSHIFQALYDHLDSLKDN
CCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA