The gene/protein map for NC_008086 is currently unavailable.
Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

Click here to switch to the map view.

The map label for this gene is cheW [H]

Identifier: 108563426

GI number: 108563426

Start: 1057061

End: 1057558

Strand: Direct

Name: cheW [H]

Synonym: HPAG1_1001

Alternate gene names: 108563426

Gene position: 1057061-1057558 (Clockwise)

Preceding gene: 108563425

Following gene: 108563428

Centisome position: 66.22

GC content: 38.15

Gene sequence:

>498_bases
GTGAGCAACCAATTAAAAGATTTATTTGAAAGACAAAAAGAAGCTAATGCAGGTTCTAAACCAGAAGACAATGAAGAAAT
TTTGCAATTCATTGGCTTTATTATTGGCGATGAAGAATACGCCATTCCCATTTTGAATATTTTAGAAATCGTCAAACCCA
TTGGTTACACACGAGTCCCTGAAACCCCAAACTATGTGCTTGGCGTGTTCAATTTAAGGGGTAATGTCTTCCCGTTGATT
AGCCTGCGTTTAAAATTTGGCTTGAAAGCTGAAAAGCAAAACAAAGACACTCGTTATCTGGTGGTGCGCCATAATGATCA
GATCGCTGGGTTTTTCATCGATCGCTTAACTGAAGCCATTCGCATCAAGCAAACGGATATTGATCCGGTGCCAGAAACTT
TGAGCGATAACAATAATTTAACTTATGGTATTGGGAAGCAAAACGACAGACTCGTAACCATTTTAAGAGTGGAAGAAATC
TTAAAGAAAGACTTCTAA

Upstream 100 bases:

>100_bases
GCGTTGAATCCGGCATGACTGAATACATCACCAAACCTTATAGCGGTGAGTATTTAACCACCGTAGTGAAGCGCAGTATT
AAATTAGAAGGAGACCAATC

Downstream 100 bases:

>100_bases
AAACCTTTTCTATCCAAATAAGCCCCTGTAGGCTTTGAGAAAGACTTATCCCATTAAAAAGCTTGATTTTAATCAAGCGA
TAATGTTTGATTCAAAACAG

Product: CheA-MCP coupling protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MSNQLKDLFERQKEANAGSKPEDNEEILQFIGFIIGDEEYAIPILNILEIVKPIGYTRVPETPNYVLGVFNLRGNVFPLI
SLRLKFGLKAEKQNKDTRYLVVRHNDQIAGFFIDRLTEAIRIKQTDIDPVPETLSDNNNLTYGIGKQNDRLVTILRVEEI
LKKDF

Sequences:

>Translated_165_residues
MSNQLKDLFERQKEANAGSKPEDNEEILQFIGFIIGDEEYAIPILNILEIVKPIGYTRVPETPNYVLGVFNLRGNVFPLI
SLRLKFGLKAEKQNKDTRYLVVRHNDQIAGFFIDRLTEAIRIKQTDIDPVPETLSDNNNLTYGIGKQNDRLVTILRVEEI
LKKDF
>Mature_164_residues
SNQLKDLFERQKEANAGSKPEDNEEILQFIGFIIGDEEYAIPILNILEIVKPIGYTRVPETPNYVLGVFNLRGNVFPLIS
LRLKFGLKAEKQNKDTRYLVVRHNDQIAGFFIDRLTEAIRIKQTDIDPVPETLSDNNNLTYGIGKQNDRLVTILRVEEIL
KKDF

Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. It physically bridges CheA to the MCPs (methyl-accepting chemotaxis proteins) to allow regulated phosphotransfer to CheY and CheB [H]

COG id: COG0835

COG function: function code NT; Chemotaxis signal transduction protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cheW-like domain [H]

Homologues:

Organism=Escherichia coli, GI1788196, Length=148, Percent_Identity=30.4054054054054, Blast_Score=81, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002545 [H]

Pfam domain/function: PF01584 CheW [H]

EC number: NA

Molecular weight: Translated: 18977; Mature: 18846

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS50851 CHEW

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNQLKDLFERQKEANAGSKPEDNEEILQFIGFIIGDEEYAIPILNILEIVKPIGYTRVP
CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC
ETPNYVLGVFNLRGNVFPLISLRLKFGLKAEKQNKDTRYLVVRHNDQIAGFFIDRLTEAI
CCCCEEEEEEECCCCEEHHEEEEHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHH
RIKQTDIDPVPETLSDNNNLTYGIGKQNDRLVTILRVEEILKKDF
HHCCCCCCCCCHHHCCCCCEEEECCCCCCCEEEHHHHHHHHHHCC
>Mature Secondary Structure 
SNQLKDLFERQKEANAGSKPEDNEEILQFIGFIIGDEEYAIPILNILEIVKPIGYTRVP
CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC
ETPNYVLGVFNLRGNVFPLISLRLKFGLKAEKQNKDTRYLVVRHNDQIAGFFIDRLTEAI
CCCCEEEEEEECCCCEEHHEEEEHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHH
RIKQTDIDPVPETLSDNNNLTYGIGKQNDRLVTILRVEEILKKDF
HHCCCCCCCCCHHHCCCCCEEEECCCCCCCEEEHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]