Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
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Accession | NC_008086 |
Length | 1,596,366 |
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The map label for this gene is ftsZ [H]
Identifier: 108563385
GI number: 108563385
Start: 1008104
End: 1009261
Strand: Direct
Name: ftsZ [H]
Synonym: HPAG1_0960
Alternate gene names: 108563385
Gene position: 1008104-1009261 (Clockwise)
Preceding gene: 108563384
Following gene: 108563392
Centisome position: 63.15
GC content: 43.87
Gene sequence:
>1158_bases ATGGTTCATCAATCAGAGATGGAAAATTATAATATTGGTCAAGCGAGCATTGAAGAAGTAAGCGATCCAGCTTATAAAGG GGCTAAGATTGTCGTCATCGGTGTTGGAGGTGGGGGGTCTAACATGATCAAACACCTGGTTGAATACGGCGTGCATCAAG ATGTTACCCCCATTGCAACAAACACTGATGGCCAACATCTCAAAAACAACCCCGCTCCGGTTAAAATCCTTTTAGGCAAA GAATCCACTGGAGGTTTAGGCGCTGGAGGGGTTCCTGATATTGGTAGAAAAGCCGCTGAAGAAAGCGCTAATGAAATTAG AGAAGCGATTAAAGACGCTAAATTAGTCATTATCTCTACAGGACTTGGAGGAGGGACTGGGACTGGAGCCACCCCTACTA TCGTTAAAATCGCAAAAGAAGTGGGAGCACTCACGATTGCTATCGTTACCAAGCCTTTCAAATACGAAGGGAATCAAAAA AGAAAGAGGGCTGAAGAGGGATTGAAAGAATTGGAGCAGTCTAGCGATTCTATTTTGGTTATCCCTAATGACAAAATCCT TCTCACCATGAAAAAAAACGCTAGCACCACGGAGTGTTATAGGGAAGTTGATGATGTCTTGGTTAGGGCTGTGAGCGGCA TTTCTACCATCATCACCAAACCCGGTAATATCAATGTTGATTTTGCCGATTTAAAGAGCGCTCTTGGTTTTAAGGGCTTT GCGTTAATGGGTATTGGTGAAGCGACTGGCGAAGAATCCGCTAAATTAGCGGTGCAAAATGCGATCCAATCGCCTCTTCT TGATGACGCTTCTATTGAAGGGGCTAAGAGCATTATTGTCTTTTTTGAGCACCACCCTGATTATCCTATGATGGCTTATT CTCAAGCGTGCGATTTTATTCAAGATCAAGCCCATCAAGATGTTGATGTTAAGTTTGGTCAACACACGAGCGATAATATC CCTATTGATCATGTGCGCGTTACTATCATTGCAACCGGTGCTGAAAGAAACAGCGGTGGAGCGAGTTTGGAATCTATCGC TACGCCCTCTCAGCCTGTGGTGAAACAAACAAGAAAAGTGGGTAATGGCGAGTATTTAAAGATCCCTACTGAAGAAGAGC TATCCATACCCACAACCATGAGAATCCAGCAAGATTGA
Upstream 100 bases:
>100_bases GCCTTGATAGTTATCAAAAGCCAGAAAACATGGTATAATCTTTCAGGTATTTATCAAAGTTTAAGATTTGCAAAAATCGT ATCTCAAGGGGAATGTGGCT
Downstream 100 bases:
>100_bases TTGCAGATCTCGCTTTTCTCCCCTATTTTTACAGGGCTATAATAAAGCGGTTTGTTGGGTTCGCTCTCATTTATTTTTTA GAATAAAATTAAAAAGCTTT
Product: cell division protein FtsZ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MVHQSEMENYNIGQASIEEVSDPAYKGAKIVVIGVGGGGSNMIKHLVEYGVHQDVTPIATNTDGQHLKNNPAPVKILLGK ESTGGLGAGGVPDIGRKAAEESANEIREAIKDAKLVIISTGLGGGTGTGATPTIVKIAKEVGALTIAIVTKPFKYEGNQK RKRAEEGLKELEQSSDSILVIPNDKILLTMKKNASTTECYREVDDVLVRAVSGISTIITKPGNINVDFADLKSALGFKGF ALMGIGEATGEESAKLAVQNAIQSPLLDDASIEGAKSIIVFFEHHPDYPMMAYSQACDFIQDQAHQDVDVKFGQHTSDNI PIDHVRVTIIATGAERNSGGASLESIATPSQPVVKQTRKVGNGEYLKIPTEEELSIPTTMRIQQD
Sequences:
>Translated_385_residues MVHQSEMENYNIGQASIEEVSDPAYKGAKIVVIGVGGGGSNMIKHLVEYGVHQDVTPIATNTDGQHLKNNPAPVKILLGK ESTGGLGAGGVPDIGRKAAEESANEIREAIKDAKLVIISTGLGGGTGTGATPTIVKIAKEVGALTIAIVTKPFKYEGNQK RKRAEEGLKELEQSSDSILVIPNDKILLTMKKNASTTECYREVDDVLVRAVSGISTIITKPGNINVDFADLKSALGFKGF ALMGIGEATGEESAKLAVQNAIQSPLLDDASIEGAKSIIVFFEHHPDYPMMAYSQACDFIQDQAHQDVDVKFGQHTSDNI PIDHVRVTIIATGAERNSGGASLESIATPSQPVVKQTRKVGNGEYLKIPTEEELSIPTTMRIQQD >Mature_385_residues MVHQSEMENYNIGQASIEEVSDPAYKGAKIVVIGVGGGGSNMIKHLVEYGVHQDVTPIATNTDGQHLKNNPAPVKILLGK ESTGGLGAGGVPDIGRKAAEESANEIREAIKDAKLVIISTGLGGGTGTGATPTIVKIAKEVGALTIAIVTKPFKYEGNQK RKRAEEGLKELEQSSDSILVIPNDKILLTMKKNASTTECYREVDDVLVRAVSGISTIITKPGNINVDFADLKSALGFKGF ALMGIGEATGEESAKLAVQNAIQSPLLDDASIEGAKSIIVFFEHHPDYPMMAYSQACDFIQDQAHQDVDVKFGQHTSDNI PIDHVRVTIIATGAERNSGGASLESIATPSQPVVKQTRKVGNGEYLKIPTEEELSIPTTMRIQQD
Specific function: This protein is essential to the cell-division process. It seems to assemble into a dynamic ring on the inner surface of the cytoplasmic membrane at the place where division will occur, and the formation of the ring is the signal for septation to begin. B
COG id: COG0206
COG function: function code D; Cell division GTPase
Gene ontology:
Cell location: Cytoplasm. Note=Assembles at the inner surface of the cytoplasmic membrane (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsZ family [H]
Homologues:
Organism=Escherichia coli, GI1786284, Length=293, Percent_Identity=39.2491467576792, Blast_Score=193, Evalue=2e-50,
Paralogues:
None
Copy number: 320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020805 - InterPro: IPR000158 - InterPro: IPR008280 - InterPro: IPR018316 - InterPro: IPR003008 [H]
Pfam domain/function: PF00091 Tubulin [H]
EC number: NA
Molecular weight: Translated: 40969; Mature: 40969
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: PS01134 FTSZ_1 ; PS01135 FTSZ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVHQSEMENYNIGQASIEEVSDPAYKGAKIVVIGVGGGGSNMIKHLVEYGVHQDVTPIAT CCCCHHCCCCCCCHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCC NTDGQHLKNNPAPVKILLGKESTGGLGAGGVPDIGRKAAEESANEIREAIKDAKLVIIST CCCCCHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEE GLGGGTGTGATPTIVKIAKEVGALTIAIVTKPFKYEGNQKRKRAEEGLKELEQSSDSILV CCCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEE IPNDKILLTMKKNASTTECYREVDDVLVRAVSGISTIITKPGNINVDFADLKSALGFKGF EECCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHEEECCCCCEEEHHHHHHHHCCCCE ALMGIGEATGEESAKLAVQNAIQSPLLDDASIEGAKSIIVFFEHHPDYPMMAYSQACDFI EEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHH QDQAHQDVDVKFGQHTSDNIPIDHVRVTIIATGAERNSGGASLESIATPSQPVVKQTRKV HHHCCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHCCCCHHHHHHHHHC GNGEYLKIPTEEELSIPTTMRIQQD CCCCEEECCCCCCCCCCEEEEEECC >Mature Secondary Structure MVHQSEMENYNIGQASIEEVSDPAYKGAKIVVIGVGGGGSNMIKHLVEYGVHQDVTPIAT CCCCHHCCCCCCCHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCC NTDGQHLKNNPAPVKILLGKESTGGLGAGGVPDIGRKAAEESANEIREAIKDAKLVIIST CCCCCHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEE GLGGGTGTGATPTIVKIAKEVGALTIAIVTKPFKYEGNQKRKRAEEGLKELEQSSDSILV CCCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEE IPNDKILLTMKKNASTTECYREVDDVLVRAVSGISTIITKPGNINVDFADLKSALGFKGF EECCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHEEECCCCCEEEHHHHHHHHCCCCE ALMGIGEATGEESAKLAVQNAIQSPLLDDASIEGAKSIIVFFEHHPDYPMMAYSQACDFI EEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHH QDQAHQDVDVKFGQHTSDNIPIDHVRVTIIATGAERNSGGASLESIATPSQPVVKQTRKV HHHCCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHCCCCHHHHHHHHHC GNGEYLKIPTEEELSIPTTMRIQQD CCCCEEECCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]