Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
---|---|
Accession | NC_008086 |
Length | 1,596,366 |
Click here to switch to the map view.
The map label for this gene is ftsA [H]
Identifier: 108563384
GI number: 108563384
Start: 1006495
End: 1007973
Strand: Direct
Name: ftsA [H]
Synonym: HPAG1_0959
Alternate gene names: 108563384
Gene position: 1006495-1007973 (Clockwise)
Preceding gene: 108563383
Following gene: 108563385
Centisome position: 63.05
GC content: 42.33
Gene sequence:
>1479_bases ATGGAACATAAAGAAATCGTTATAGGGGTTGATATAGGCTCTAGAAAGATTTGTGCGATAGTGGCTGAATTTAAAGAAGG GATTTTGCGCATCATTGGCACCGCCCATCAAGACTCCAAAGAAATCAATTCAAAAGCCATTAAAAGAGGGCGTATCAATA GCCTTGCTCACGCTTCTAACGCCATTAAAGAAGTGATTAATAGCGCTAAAAAAATGGCAGGCTTGAACGCTGATGAAGAC AGGAATAACCCCATGCCCCATTTTGGGGAATACCGCCCTAAAACTAAGGCGATTGTTTCTTTTTCTGGGGCTTATACTGA AAGCATTAGAGATGTTACCGGTGTAGCGAGCACCAAAGATAATGTGGTAACCATTGATGAAATCAATCGCGCTATCAATA ACGCATGCGCTAAAGCAGGCTTGGATAACGACAAACATATTTTGCATGCCCTCCCCTATCGCTTCACTTTAGACAAACAA GAAGTGAATGACCCTTTAGGAATGAGCGGGACTCGCTTAGAAGTCTTTATCCACATTGTCTATACAGAAAAAAACAACAT TGAAAATTTAGAAAAAATCATGATTCAATCTGGGGTGGAGATTGAAAACATCGTGATCAATTCTTATGCAGCCTCAATTG CTACCTTGTCTAATGACGAAAGGGAATTGGGCGTGGCTTGCGTGGATATGGGCGGAGAGACATGCAACCTTACGATTTAT AGCGGCAATTCCATACGCTATAACAAATACTTACCCGTAGGCTCTCACCATTTAACCACGGATTTATCGCACATGCTCAA CACCCCATTCCCTTACGCTGAAGAAGTTAAGATCAAATACGGGGATCTTTCTTTTGAAGGCGGCACAGAAACGCCCTCTC AAAATGTCCAAATCCCTACCACCGGCTCTGATGGCCATGAAAGCCATATTGTGCCGCTTAGTGAAATCCAAACTATCATG AGGGAAAGGGCTTTAGAAACTTTTGAAATCATCCATAGGAGCATTCAAGATAGCGGTTTAGAAGAGCATTTGGGTGGGGG CGTTGTTTTAACCGGCGGGATGGCTTTAATGAAAGGGATCAAAGAGCTGGCTAAAGCCCATTTCACTAATTACCCCGTGC GTTTGGCCGCTCCTATGGAAAAATACAATATCATGGGCATGTTTGAAGACTTGAAAGACCCTCGCTTTTCAGTCGTGGTT GGCTTGATTTTATACAAAGCAGGGGGGCATACCAATTATGAAAGAGACTCTAAAGGGATTATCCGCTACCATGAAAGCGA TGATTACACAAGAACAGCCCATCAATCAAGCCCTACCCCCCATATCCATTCATCGCCCACAGAAAGGAATTTGAGCGATT TAAAAGCCCCTAGCGCTCCTTTAAACACCGCTAAAAACGATGACTTCTTACCTATAAAACCCACCGAACAAAAAGGTTTT TTTAAAAGTTTCCTTGATAAGATTTCTAAAATCTTTTAA
Upstream 100 bases:
>100_bases CAATAACACTAAAACGGATTTTTTTGATAAAGCGTTGATAGAAGAATTGAAAAAACGCTATAAGATAGTCAAATACATTC AATAAATGCAAGGGGAAATC
Downstream 100 bases:
>100_bases GATACAGCCATTTCTTTATGCGATAAAAACGCCTTGATAGTTATCAAAAGCCAGAAAACATGGTATAATCTTTCAGGTAT TTATCAAAGTTTAAGATTTG
Product: cell division protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 492; Mature: 492
Protein sequence:
>492_residues MEHKEIVIGVDIGSRKICAIVAEFKEGILRIIGTAHQDSKEINSKAIKRGRINSLAHASNAIKEVINSAKKMAGLNADED RNNPMPHFGEYRPKTKAIVSFSGAYTESIRDVTGVASTKDNVVTIDEINRAINNACAKAGLDNDKHILHALPYRFTLDKQ EVNDPLGMSGTRLEVFIHIVYTEKNNIENLEKIMIQSGVEIENIVINSYAASIATLSNDERELGVACVDMGGETCNLTIY SGNSIRYNKYLPVGSHHLTTDLSHMLNTPFPYAEEVKIKYGDLSFEGGTETPSQNVQIPTTGSDGHESHIVPLSEIQTIM RERALETFEIIHRSIQDSGLEEHLGGGVVLTGGMALMKGIKELAKAHFTNYPVRLAAPMEKYNIMGMFEDLKDPRFSVVV GLILYKAGGHTNYERDSKGIIRYHESDDYTRTAHQSSPTPHIHSSPTERNLSDLKAPSAPLNTAKNDDFLPIKPTEQKGF FKSFLDKISKIF
Sequences:
>Translated_492_residues MEHKEIVIGVDIGSRKICAIVAEFKEGILRIIGTAHQDSKEINSKAIKRGRINSLAHASNAIKEVINSAKKMAGLNADED RNNPMPHFGEYRPKTKAIVSFSGAYTESIRDVTGVASTKDNVVTIDEINRAINNACAKAGLDNDKHILHALPYRFTLDKQ EVNDPLGMSGTRLEVFIHIVYTEKNNIENLEKIMIQSGVEIENIVINSYAASIATLSNDERELGVACVDMGGETCNLTIY SGNSIRYNKYLPVGSHHLTTDLSHMLNTPFPYAEEVKIKYGDLSFEGGTETPSQNVQIPTTGSDGHESHIVPLSEIQTIM RERALETFEIIHRSIQDSGLEEHLGGGVVLTGGMALMKGIKELAKAHFTNYPVRLAAPMEKYNIMGMFEDLKDPRFSVVV GLILYKAGGHTNYERDSKGIIRYHESDDYTRTAHQSSPTPHIHSSPTERNLSDLKAPSAPLNTAKNDDFLPIKPTEQKGF FKSFLDKISKIF >Mature_492_residues MEHKEIVIGVDIGSRKICAIVAEFKEGILRIIGTAHQDSKEINSKAIKRGRINSLAHASNAIKEVINSAKKMAGLNADED RNNPMPHFGEYRPKTKAIVSFSGAYTESIRDVTGVASTKDNVVTIDEINRAINNACAKAGLDNDKHILHALPYRFTLDKQ EVNDPLGMSGTRLEVFIHIVYTEKNNIENLEKIMIQSGVEIENIVINSYAASIATLSNDERELGVACVDMGGETCNLTIY SGNSIRYNKYLPVGSHHLTTDLSHMLNTPFPYAEEVKIKYGDLSFEGGTETPSQNVQIPTTGSDGHESHIVPLSEIQTIM RERALETFEIIHRSIQDSGLEEHLGGGVVLTGGMALMKGIKELAKAHFTNYPVRLAAPMEKYNIMGMFEDLKDPRFSVVV GLILYKAGGHTNYERDSKGIIRYHESDDYTRTAHQSSPTPHIHSSPTERNLSDLKAPSAPLNTAKNDDFLPIKPTEQKGF FKSFLDKISKIF
Specific function: This protein may be involved in anomalous filament growth. May be a component of the septum [H]
COG id: COG0849
COG function: function code D; Actin-like ATPase involved in cell division
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsA/mreB family [H]
Homologues:
Organism=Escherichia coli, GI1786282, Length=423, Percent_Identity=26.0047281323877, Blast_Score=172, Evalue=3e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020823 - InterPro: IPR003494 [H]
Pfam domain/function: PF02491 FtsA [H]
EC number: NA
Molecular weight: Translated: 54466; Mature: 54466
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHKEIVIGVDIGSRKICAIVAEFKEGILRIIGTAHQDSKEINSKAIKRGRINSLAHASN CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHH AIKEVINSAKKMAGLNADEDRNNPMPHFGEYRPKTKAIVSFSGAYTESIRDVTGVASTKD HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCCC NVVTIDEINRAINNACAKAGLDNDKHILHALPYRFTLDKQEVNDPLGMSGTRLEVFIHIV CEEEHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEEECHHHCCCCCCCCCCEEEEEEEEE YTEKNNIENLEKIMIQSGVEIENIVINSYAASIATLSNDERELGVACVDMGGETCNLTIY EECCCCHHHHHHHHHHCCCCEEHEEEHHHHHHHHHCCCCCHHHCEEEEECCCCEEEEEEE SGNSIRYNKYLPVGSHHLTTDLSHMLNTPFPYAEEVKIKYGDLSFEGGTETPSQNVQIPT ECCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCEEECCCCCCCCCCEEECC TGSDGHESHIVPLSEIQTIMRERALETFEIIHRSIQDSGLEEHLGGGVVLTGGMALMKGI CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEECHHHHHHHH KELAKAHFTNYPVRLAAPMEKYNIMGMFEDLKDPRFSVVVGLILYKAGGHTNYERDSKGI HHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCE IRYHESDDYTRTAHQSSPTPHIHSSPTERNLSDLKAPSAPLNTAKNDDFLPIKPTEQKGF EEEECCCCCHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH FKSFLDKISKIF HHHHHHHHHHCC >Mature Secondary Structure MEHKEIVIGVDIGSRKICAIVAEFKEGILRIIGTAHQDSKEINSKAIKRGRINSLAHASN CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHH AIKEVINSAKKMAGLNADEDRNNPMPHFGEYRPKTKAIVSFSGAYTESIRDVTGVASTKD HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCCC NVVTIDEINRAINNACAKAGLDNDKHILHALPYRFTLDKQEVNDPLGMSGTRLEVFIHIV CEEEHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEEECHHHCCCCCCCCCCEEEEEEEEE YTEKNNIENLEKIMIQSGVEIENIVINSYAASIATLSNDERELGVACVDMGGETCNLTIY EECCCCHHHHHHHHHHCCCCEEHEEEHHHHHHHHHCCCCCHHHCEEEEECCCCEEEEEEE SGNSIRYNKYLPVGSHHLTTDLSHMLNTPFPYAEEVKIKYGDLSFEGGTETPSQNVQIPT ECCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCEEECCCCCCCCCCEEECC TGSDGHESHIVPLSEIQTIMRERALETFEIIHRSIQDSGLEEHLGGGVVLTGGMALMKGI CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEECHHHHHHHH KELAKAHFTNYPVRLAAPMEKYNIMGMFEDLKDPRFSVVVGLILYKAGGHTNYERDSKGI HHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCE IRYHESDDYTRTAHQSSPTPHIHSSPTERNLSDLKAPSAPLNTAKNDDFLPIKPTEQKGF EEEECCCCCHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH FKSFLDKISKIF HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]