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The map label for this gene is 108563321

Identifier: 108563321

GI number: 108563321

Start: 933150

End: 934739

Strand: Direct

Name: 108563321

Synonym: HPAG1_0896

Alternate gene names: NA

Gene position: 933150-934739 (Clockwise)

Preceding gene: 108563320

Following gene: 108563327

Centisome position: 58.45

GC content: 43.52

Gene sequence:

>1590_bases
ATGAAACAAAATTTAAAGCCATTCAAAATGATTAAGGAAAATTTAATGACACAATCTCAAAAAGTAAGATTCTTAGCCCC
TTTAAGCCTAGCGTTAAGCTTGAGCTTCAATCCAGTGGGCGCTGAAGAAGATGGGGGCTTTATGACCTTTGGGTATGAAT
TAGGTCAGGTGGTCCAACAAGTGAAAAACCCGGGTAAAATCAAAGCCGAAGAATTAGCCGGCTTGTTAAACTCTAATACG
ACAAACAACACCAATATCAATATTGCAGGCACAGGAGGCAATGTCGCCGGGACTTTAGGCAACCTCTTTATGAACCAACT
AGGCAATTTGATTGATTTGTATCCCACTTTGAACACTAGCAATATCCATCAATGTGGTGCTACTAATAATAGTAATGGTG
CGACCGCAGCTGCTACTAGTTCTACTAGTAGTTCTCCTTGTTTCCAAGGCAACCTGGCTCTTTATAACGAAATGGTTGGC
TCTATCAAAACTTTGAGTCAAAACATCAGCAAGAATATCTTTCAAGGCAACAACAACACCACGAGCCAAAACCTCTCCAA
CCAGCTCAGTGAGCTTAACACCGCTAGCGTTTATTTGACTTACATGAACTCGTTCTTAAACGCCAATAACCAAGCGGGTG
GGATTTTTCAAAACAACACTAATCGAGCTTATGGGAATGGGGTTACCGCTCAACAAATCGCTTATATCCTAAAGCAAGCT
TCAATCACTATGGGGCCAAGCGGTGATAGTGGGGCTGCCGCAGCGTTTTTGGATGCCGCTTTAGCGCAACATGTTTTCAA
CTCCGCTAACGCCGGGAATGATTTGAGCGCTAAGGAATTCACTAGCTTGGTGCAAAACATCGTCAATAATTCTCAAAACG
CTTTAACGCTAGCCAACAACGCTAACATCAGCAATTCAACAGGCTATCAAGTGAGCTATGGCGGGAATATTGATCAAGCG
CGCTCTACCCAACTGTTAAACAACACCACAAACACTTTAGCTAAAGTTACCGCTCTAAATAACGAGCTTAAAGCTAACCC
ATGGCTTGGGAATTTCGCTGCCGGTAACAGCTCTCAAGTGAATGCGTTTAACGGGTTTATCACTAAAATCGGTTATAAGC
AATTCTTTGGGGAAAACAAGAATGTGGGCTTACGCTACTACGGCTTCTTCAGTTATAATGGTGCGGGCGTGGGTAATGGC
CCTACTTACAATCAAGTCAATCTGCTCACTTATGGGGTGGGGACTGATGTGCTTTACAATGTGTTTAGCCGCTCTTTTGG
TAGCCGAAGTCTTAATGCGGGCTTCTTTGGGGGGATCCAACTCGCAGGGGATACTTACATCAGCACGCTAAGAAACAGCC
CTCAACTTGCGAGCAGGCCTACAGCGACGAAATTCCAATTCTTGTTTGATGTGGGGTTACGCATGAACTTTGGTATCTTG
AAAAAAGACCTAAAAAGCCATAACCAGCATTCTATAGAAATCGGTGTGCAAATCCCTACGATTTATAACACTTATTATAA
AGCTGGCGGCGCTGAAGTGAAATACTTCCGCCCTTATAGCGTGTATTGGGTCTATGGCTACGCCTTCTAA

Upstream 100 bases:

>100_bases
TTATTACAAATCCGCAGGGACTACCGTGAAGTATTTCCGTCCTTATAGCGTTTATTGGTCTTATGGGTATTCATTCTAAG
AAAGGGGGGAAGAGACAAAC

Downstream 100 bases:

>100_bases
AAAAGCTCAAGGCCTTTTATAGGCTTTGAACGAATCCCTTTAAACCTCCGCTTTAAAACAACCCCCAAAATCCTTATCAA
ATAATGGAATTAACCCCCAT

Product: outer membrane protein HopB

Products: NA

Alternate protein names: Outer Membrane Protein HopQ; Outer Membrane Protein HopZ; Outer Membrane Protein/Porin; Outer Membrane Protein HorC; Outer Membrane Protein HorJ; Outer Membrane Protein SabB/HopO; Outer Membrane Protein HopA; Outer Membrane Protein BabA; Outer Membrane Protein HopD; Outer Membrane Protein Adhesin; Outer Membrane Protein ,Adhesin BabA BabB; Outer Membrane Function; Outer Membrane Protein HorF; Adhesin; Outer Membrane Protein HopB; Outer Membrane Protein HopL; Outer Membrane Protein HopC; Outer Membrane Protein,HopV BabB BabA; Outer Membrane Protein HorB; Outer Membrane Protein HopF; Outer Membrane Protein HopG

Number of amino acids: Translated: 529; Mature: 529

Protein sequence:

>529_residues
MKQNLKPFKMIKENLMTQSQKVRFLAPLSLALSLSFNPVGAEEDGGFMTFGYELGQVVQQVKNPGKIKAEELAGLLNSNT
TNNTNINIAGTGGNVAGTLGNLFMNQLGNLIDLYPTLNTSNIHQCGATNNSNGATAAATSSTSSSPCFQGNLALYNEMVG
SIKTLSQNISKNIFQGNNNTTSQNLSNQLSELNTASVYLTYMNSFLNANNQAGGIFQNNTNRAYGNGVTAQQIAYILKQA
SITMGPSGDSGAAAAFLDAALAQHVFNSANAGNDLSAKEFTSLVQNIVNNSQNALTLANNANISNSTGYQVSYGGNIDQA
RSTQLLNNTTNTLAKVTALNNELKANPWLGNFAAGNSSQVNAFNGFITKIGYKQFFGENKNVGLRYYGFFSYNGAGVGNG
PTYNQVNLLTYGVGTDVLYNVFSRSFGSRSLNAGFFGGIQLAGDTYISTLRNSPQLASRPTATKFQFLFDVGLRMNFGIL
KKDLKSHNQHSIEIGVQIPTIYNTYYKAGGAEVKYFRPYSVYWVYGYAF

Sequences:

>Translated_529_residues
MKQNLKPFKMIKENLMTQSQKVRFLAPLSLALSLSFNPVGAEEDGGFMTFGYELGQVVQQVKNPGKIKAEELAGLLNSNT
TNNTNINIAGTGGNVAGTLGNLFMNQLGNLIDLYPTLNTSNIHQCGATNNSNGATAAATSSTSSSPCFQGNLALYNEMVG
SIKTLSQNISKNIFQGNNNTTSQNLSNQLSELNTASVYLTYMNSFLNANNQAGGIFQNNTNRAYGNGVTAQQIAYILKQA
SITMGPSGDSGAAAAFLDAALAQHVFNSANAGNDLSAKEFTSLVQNIVNNSQNALTLANNANISNSTGYQVSYGGNIDQA
RSTQLLNNTTNTLAKVTALNNELKANPWLGNFAAGNSSQVNAFNGFITKIGYKQFFGENKNVGLRYYGFFSYNGAGVGNG
PTYNQVNLLTYGVGTDVLYNVFSRSFGSRSLNAGFFGGIQLAGDTYISTLRNSPQLASRPTATKFQFLFDVGLRMNFGIL
KKDLKSHNQHSIEIGVQIPTIYNTYYKAGGAEVKYFRPYSVYWVYGYAF
>Mature_529_residues
MKQNLKPFKMIKENLMTQSQKVRFLAPLSLALSLSFNPVGAEEDGGFMTFGYELGQVVQQVKNPGKIKAEELAGLLNSNT
TNNTNINIAGTGGNVAGTLGNLFMNQLGNLIDLYPTLNTSNIHQCGATNNSNGATAAATSSTSSSPCFQGNLALYNEMVG
SIKTLSQNISKNIFQGNNNTTSQNLSNQLSELNTASVYLTYMNSFLNANNQAGGIFQNNTNRAYGNGVTAQQIAYILKQA
SITMGPSGDSGAAAAFLDAALAQHVFNSANAGNDLSAKEFTSLVQNIVNNSQNALTLANNANISNSTGYQVSYGGNIDQA
RSTQLLNNTTNTLAKVTALNNELKANPWLGNFAAGNSSQVNAFNGFITKIGYKQFFGENKNVGLRYYGFFSYNGAGVGNG
PTYNQVNLLTYGVGTDVLYNVFSRSFGSRSLNAGFFGGIQLAGDTYISTLRNSPQLASRPTATKFQFLFDVGLRMNFGIL
KKDLKSHNQHSIEIGVQIPTIYNTYYKAGGAEVKYFRPYSVYWVYGYAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56899; Mature: 56899

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQNLKPFKMIKENLMTQSQKVRFLAPLSLALSLSFNPVGAEEDGGFMTFGYELGQVVQQ
CCCCCCHHHHHHHHHHCHHHCEEEEEEEEEEEEEECCCCCCCCCCCEEEECHHHHHHHHH
VKNPGKIKAEELAGLLNSNTTNNTNINIAGTGGNVAGTLGNLFMNQLGNLIDLYPTLNTS
HCCCCCEEHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCEEEECCCCCCC
NIHQCGATNNSNGATAAATSSTSSSPCFQGNLALYNEMVGSIKTLSQNISKNIFQGNNNT
CCEECCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TSQNLSNQLSELNTASVYLTYMNSFLNANNQAGGIFQNNTNRAYGNGVTAQQIAYILKQA
CHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHH
SITMGPSGDSGAAAAFLDAALAQHVFNSANAGNDLSAKEFTSLVQNIVNNSQNALTLANN
CEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECC
ANISNSTGYQVSYGGNIDQARSTQLLNNTTNTLAKVTALNNELKANPWLGNFAAGNSSQV
CCCCCCCCEEEEECCCCCHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
NAFNGFITKIGYKQFFGENKNVGLRYYGFFSYNGAGVGNGPTYNQVNLLTYGVGTDVLYN
CHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCCHHHHHH
VFSRSFGSRSLNAGFFGGIQLAGDTYISTLRNSPQLASRPTATKFQFLFDVGLRMNFGIL
HHHHHCCCCCCCCCCCCCEEECCHHHHHHHCCCCCCCCCCCCHHHHEEEHHCCCCCHHHH
KKDLKSHNQHSIEIGVQIPTIYNTYYKAGGAEVKYFRPYSVYWVYGYAF
HHHHHCCCCCEEEEEEECCHHHHHHHHCCCCEEEEECCEEEEEEEEEEC
>Mature Secondary Structure
MKQNLKPFKMIKENLMTQSQKVRFLAPLSLALSLSFNPVGAEEDGGFMTFGYELGQVVQQ
CCCCCCHHHHHHHHHHCHHHCEEEEEEEEEEEEEECCCCCCCCCCCEEEECHHHHHHHHH
VKNPGKIKAEELAGLLNSNTTNNTNINIAGTGGNVAGTLGNLFMNQLGNLIDLYPTLNTS
HCCCCCEEHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCEEEECCCCCCC
NIHQCGATNNSNGATAAATSSTSSSPCFQGNLALYNEMVGSIKTLSQNISKNIFQGNNNT
CCEECCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TSQNLSNQLSELNTASVYLTYMNSFLNANNQAGGIFQNNTNRAYGNGVTAQQIAYILKQA
CHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHH
SITMGPSGDSGAAAAFLDAALAQHVFNSANAGNDLSAKEFTSLVQNIVNNSQNALTLANN
CEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECC
ANISNSTGYQVSYGGNIDQARSTQLLNNTTNTLAKVTALNNELKANPWLGNFAAGNSSQV
CCCCCCCCEEEEECCCCCHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
NAFNGFITKIGYKQFFGENKNVGLRYYGFFSYNGAGVGNGPTYNQVNLLTYGVGTDVLYN
CHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCCHHHHHH
VFSRSFGSRSLNAGFFGGIQLAGDTYISTLRNSPQLASRPTATKFQFLFDVGLRMNFGIL
HHHHHCCCCCCCCCCCCCEEECCHHHHHHHCCCCCCCCCCCCHHHHEEEHHCCCCCHHHH
KKDLKSHNQHSIEIGVQIPTIYNTYYKAGGAEVKYFRPYSVYWVYGYAF
HHHHHCCCCCEEEEEEECCHHHHHHHHCCCCEEEEECCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA