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The map label for this gene is 108563320

Identifier: 108563320

GI number: 108563320

Start: 931575

End: 933128

Strand: Direct

Name: 108563320

Synonym: HPAG1_0895

Alternate gene names: NA

Gene position: 931575-933128 (Clockwise)

Preceding gene: 108563318

Following gene: 108563321

Centisome position: 58.36

GC content: 45.69

Gene sequence:

>1554_bases
ATGATAAAGAAAAATAGAACGCTGTTTCTTAGTCTAGCCCTTTGCGCTAGCATAAGTTATGCCGAAGATGATGGAGGGTT
TTTCACCGTCGGTTATCAGCTCGGGCAGGTCATGCAAGATGTCCAAAACCCAGGCGGCGCTAAAAGCGACGAACTCGCTA
GAGAGCTTAACGCTGATGTAACGAACAACATTTTAAACAACAACACCGGAGGCAATGTCGCAGGGGCGTTGAGTAACGCT
TTCTCCCAATACCTTTATTCGCTTTTAGGGGCGTATCCCACGAAACTCAATGGTAACGATGTGTCTGCGAACGCTCTTTT
AAGTGGTGCGGTAGGCAGTGGGACTTGCGCGGCTGCAGGGACGGCTGGTAGCACATTTCTTAACACTCAAAGCGCTTGCA
CCGCTGCGGGCTATTACTGGCTCCCTAGCTTGACTGACAGGATTTTAAGCACGATCGGCAGCCAGACTAACTACGGCACG
AACACCAATTTCCCCAACATGCAACAACAGCTCACCTACTTGAATGCGGGGAATGTGTTTTTTAATGCGATGAATAAGGC
TTTAGAGAAGAATAGGACTGCTACTACTAGTGGCACTAGCGGTGCGACTGGTTCAGATGGTCAAATTTACTCTCAACAAG
CCATCCAATACCTTCAAGACCAACAAAATATTCTCAATAACGCAGCGAACTTGCTCAAGCAAGATGAATTGCTCTTAGAA
GCTTTCAACTCTGCTGTAGCCGCCAACATTGGGAATAAGGAATTCAATTCAGCCGCTTTTACAGGTTTGGTGCAAGGCAT
TATTGATCAATCTCAATTGGTTTATAACGAGCTCACTAAAAACACCATTAGCGGGAGCGCGGTTAATAGCGCTACGATAA
ACTCCAACCAAGCTAACGCTGTGCAAGGGCGCGCTAGTCAGCTCCCTAACGCTCTTTATAACGCGCAAGTAACTTTGGAT
AAAATCACTGCGCTCAACAATCAGGTTAAAAGCATGCCTTACTTGCCTCAATTCAGAGCCGGGAACAGCCGTGCGACGAA
TATTTTGAACGGGTTTTACACCAAAATAGGCTATAAGCAATTCTTCGGGAAGAAAAGGAATATCGGTTTGCGCTATTATG
GTTTCTTTTCTTATAACGGAGCGAGCGTGGGCTTTAGATCCACTCAAAATAATGTAGGATTATACACTTATGGGGTGGGG
ACTGATGTGTTGTATAATATCTTTAGCCGCTCCTATCAAAACCGCTCTGTGGATATGGGCTTTTTTAGCGGTATCCAATT
AGCCGGTGAGACTTTCCAATCCACGCTCAGAGATGACCCCAATGTGAAATTGCATGGGAAAATCAATAACACGCACTTCC
AGTTCCTCTTTGACTTCGGTATGAGGATGAACTTCGGTAAGTTGGACGGGAAATCCAACCGCCACAACCAGCACACGGTG
GAATTTGGCGTGGTGGTGCCTACGATTTATAACACTTATTACAAATCCGCAGGGACTACCGTGAAGTATTTCCGTCCTTA
TAGCGTTTATTGGTCTTATGGGTATTCATTCTAA

Upstream 100 bases:

>100_bases
ATTTGACAATTTGTATTACTAAACATTATTTACAAGCTCTGATGTAACTAAATCCCAAATTTAATCTCAATCAAGGAGCA
TCCCATTGATAAGGAAAATC

Downstream 100 bases:

>100_bases
GAAAGGGGGGAAGAGACAAACATGAAACAAAATTTAAAGCCATTCAAAATGATTAAGGAAAATTTAATGACACAATCTCA
AAAAGTAAGATTCTTAGCCC

Product: outer membrane protein HopC

Products: NA

Alternate protein names: Outer Membrane Protein HopQ; Outer Membrane Protein HorA; Outer Membrane Protein HopZ; Outer Membrane Protein/Porin; Outer Membrane Protein HopW Protein (; Outer Membrane Protein HorC; Outer Membrane Protein HorJ; Outer Membrane Protein SabB/HopO; Outer Membrane Protein HopA; Outer Membrane Protein BabA; Outer Membrane Protein HopD; Outer Membrane Protein Adhesin; Outer Membrane Function; Outer Membrane Protein HorF; Adhesin; Outer Membrane Protein HopB; Outer Membrane Protein HopE; Outer Membrane Protein HopL; Outer Membrane Protein HopC; Outer Membrane Protein,HopV BabB BabA; Outer Membrane Protein HorB; Outer Membrane Protein HopF; Outer Membrane Protein HopG

Number of amino acids: Translated: 517; Mature: 517

Protein sequence:

>517_residues
MIKKNRTLFLSLALCASISYAEDDGGFFTVGYQLGQVMQDVQNPGGAKSDELARELNADVTNNILNNNTGGNVAGALSNA
FSQYLYSLLGAYPTKLNGNDVSANALLSGAVGSGTCAAAGTAGSTFLNTQSACTAAGYYWLPSLTDRILSTIGSQTNYGT
NTNFPNMQQQLTYLNAGNVFFNAMNKALEKNRTATTSGTSGATGSDGQIYSQQAIQYLQDQQNILNNAANLLKQDELLLE
AFNSAVAANIGNKEFNSAAFTGLVQGIIDQSQLVYNELTKNTISGSAVNSATINSNQANAVQGRASQLPNALYNAQVTLD
KITALNNQVKSMPYLPQFRAGNSRATNILNGFYTKIGYKQFFGKKRNIGLRYYGFFSYNGASVGFRSTQNNVGLYTYGVG
TDVLYNIFSRSYQNRSVDMGFFSGIQLAGETFQSTLRDDPNVKLHGKINNTHFQFLFDFGMRMNFGKLDGKSNRHNQHTV
EFGVVVPTIYNTYYKSAGTTVKYFRPYSVYWSYGYSF

Sequences:

>Translated_517_residues
MIKKNRTLFLSLALCASISYAEDDGGFFTVGYQLGQVMQDVQNPGGAKSDELARELNADVTNNILNNNTGGNVAGALSNA
FSQYLYSLLGAYPTKLNGNDVSANALLSGAVGSGTCAAAGTAGSTFLNTQSACTAAGYYWLPSLTDRILSTIGSQTNYGT
NTNFPNMQQQLTYLNAGNVFFNAMNKALEKNRTATTSGTSGATGSDGQIYSQQAIQYLQDQQNILNNAANLLKQDELLLE
AFNSAVAANIGNKEFNSAAFTGLVQGIIDQSQLVYNELTKNTISGSAVNSATINSNQANAVQGRASQLPNALYNAQVTLD
KITALNNQVKSMPYLPQFRAGNSRATNILNGFYTKIGYKQFFGKKRNIGLRYYGFFSYNGASVGFRSTQNNVGLYTYGVG
TDVLYNIFSRSYQNRSVDMGFFSGIQLAGETFQSTLRDDPNVKLHGKINNTHFQFLFDFGMRMNFGKLDGKSNRHNQHTV
EFGVVVPTIYNTYYKSAGTTVKYFRPYSVYWSYGYSF
>Mature_517_residues
MIKKNRTLFLSLALCASISYAEDDGGFFTVGYQLGQVMQDVQNPGGAKSDELARELNADVTNNILNNNTGGNVAGALSNA
FSQYLYSLLGAYPTKLNGNDVSANALLSGAVGSGTCAAAGTAGSTFLNTQSACTAAGYYWLPSLTDRILSTIGSQTNYGT
NTNFPNMQQQLTYLNAGNVFFNAMNKALEKNRTATTSGTSGATGSDGQIYSQQAIQYLQDQQNILNNAANLLKQDELLLE
AFNSAVAANIGNKEFNSAAFTGLVQGIIDQSQLVYNELTKNTISGSAVNSATINSNQANAVQGRASQLPNALYNAQVTLD
KITALNNQVKSMPYLPQFRAGNSRATNILNGFYTKIGYKQFFGKKRNIGLRYYGFFSYNGASVGFRSTQNNVGLYTYGVG
TDVLYNIFSRSYQNRSVDMGFFSGIQLAGETFQSTLRDDPNVKLHGKINNTHFQFLFDFGMRMNFGKLDGKSNRHNQHTV
EFGVVVPTIYNTYYKSAGTTVKYFRPYSVYWSYGYSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56310; Mature: 56310

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKNRTLFLSLALCASISYAEDDGGFFTVGYQLGQVMQDVQNPGGAKSDELARELNADV
CCCCCCCCEEEEHHHHCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHCCHH
TNNILNNNTGGNVAGALSNAFSQYLYSLLGAYPTKLNGNDVSANALLSGAVGSGTCAAAG
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEECCCCCCCEEECC
TAGSTFLNTQSACTAAGYYWLPSLTDRILSTIGSQTNYGTNTNFPNMQQQLTYLNAGNVF
CCCCCEECCCHHHHHCCEEECHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHH
FNAMNKALEKNRTATTSGTSGATGSDGQIYSQQAIQYLQDQQNILNNAANLLKQDELLLE
HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFNSAVAANIGNKEFNSAAFTGLVQGIIDQSQLVYNELTKNTISGSAVNSATINSNQANA
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCHH
VQGRASQLPNALYNAQVTLDKITALNNQVKSMPYLPQFRAGNSRATNILNGFYTKIGYKQ
HCCHHHHCCHHHHHCEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
FFGKKRNIGLRYYGFFSYNGASVGFRSTQNNVGLYTYGVGTDVLYNIFSRSYQNRSVDMG
HCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCH
FFSGIQLAGETFQSTLRDDPNVKLHGKINNTHFQFLFDFGMRMNFGKLDGKSNRHNQHTV
HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCEEE
EFGVVVPTIYNTYYKSAGTTVKYFRPYSVYWSYGYSF
EEEEEHHHHHHHHHHCCCCEEEEECCEEEEEECCCCC
>Mature Secondary Structure
MIKKNRTLFLSLALCASISYAEDDGGFFTVGYQLGQVMQDVQNPGGAKSDELARELNADV
CCCCCCCCEEEEHHHHCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHCCHH
TNNILNNNTGGNVAGALSNAFSQYLYSLLGAYPTKLNGNDVSANALLSGAVGSGTCAAAG
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEECCCCCCCEEECC
TAGSTFLNTQSACTAAGYYWLPSLTDRILSTIGSQTNYGTNTNFPNMQQQLTYLNAGNVF
CCCCCEECCCHHHHHCCEEECHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHH
FNAMNKALEKNRTATTSGTSGATGSDGQIYSQQAIQYLQDQQNILNNAANLLKQDELLLE
HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFNSAVAANIGNKEFNSAAFTGLVQGIIDQSQLVYNELTKNTISGSAVNSATINSNQANA
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCHH
VQGRASQLPNALYNAQVTLDKITALNNQVKSMPYLPQFRAGNSRATNILNGFYTKIGYKQ
HCCHHHHCCHHHHHCEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
FFGKKRNIGLRYYGFFSYNGASVGFRSTQNNVGLYTYGVGTDVLYNIFSRSYQNRSVDMG
HCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCH
FFSGIQLAGETFQSTLRDDPNVKLHGKINNTHFQFLFDFGMRMNFGKLDGKSNRHNQHTV
HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCEEE
EFGVVVPTIYNTYYKSAGTTVKYFRPYSVYWSYGYSF
EEEEEHHHHHHHHHHCCCCEEEEECCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA