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The map label for this gene is vdlD [H]

Identifier: 108563297

GI number: 108563297

Start: 912043

End: 912567

Strand: Direct

Name: vdlD [H]

Synonym: HPAG1_0872

Alternate gene names: 108563297

Gene position: 912043-912567 (Clockwise)

Preceding gene: 108563292

Following gene: 108563300

Centisome position: 57.13

GC content: 42.29

Gene sequence:

>525_bases
ATGCCTCAAATACAATCATCGCATTCTAGCCATTTTGATTTTACTATAGACACAGCGGATCGCACTAAATTATTGATGAG
CTATTTAGTCGTGCCTACAACCGCTAATTTCAACAATGTCATGCATGGGGGGGAATTATTGAATTTATTGGATAAAGTGG
CTTATGTGTGCTCAACTCGTTATTGCGCTAAAGGAACGGTCACTTTAAGCGTGGATGGGGTTACTTTTAAATACCCCATT
CCTGTAGGGAATTTGCTCACTTTTTTAGCCAGCATCAATTATGTGGGCAACACTTCATGCGAAGTGGGGATTAAGGTTTT
GAGCGAAGATATTAAAACTCGTGAAATCACGCACACCAATTCATGCTATTTCACCATGGTGGCTGTGGAAAATGGCAAAC
CCACCCCCATGCCCAAATACGAGCCTAAAACAGAGGTTGAAATCCGCCGTTATGAAGGGGCTTTGAAGCGTAAAGAAATG
CGCACACGAGGGTATTTAAAAAGCGGGAAACACGAGGGTGTTTAA

Upstream 100 bases:

>100_bases
TAATATTCACTTAATATTACTTAATTTTTACTAATATATAGTTCTTGGAATGTTTTTTACAAAAGACATTTTTAACACCA
ATTTTAATTAAGGAGAAGCA

Downstream 100 bases:

>100_bases
AAAGCAAAAAAGCGTAAGCGGTGTTTTAGCCCTAAATTTTACCCCTAAAAAAGGGGGGGTAGTTGGTGAGCGGTTGGTTT
AAGCGTTATAAATTGTGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MPQIQSSHSSHFDFTIDTADRTKLLMSYLVVPTTANFNNVMHGGELLNLLDKVAYVCSTRYCAKGTVTLSVDGVTFKYPI
PVGNLLTFLASINYVGNTSCEVGIKVLSEDIKTREITHTNSCYFTMVAVENGKPTPMPKYEPKTEVEIRRYEGALKRKEM
RTRGYLKSGKHEGV

Sequences:

>Translated_174_residues
MPQIQSSHSSHFDFTIDTADRTKLLMSYLVVPTTANFNNVMHGGELLNLLDKVAYVCSTRYCAKGTVTLSVDGVTFKYPI
PVGNLLTFLASINYVGNTSCEVGIKVLSEDIKTREITHTNSCYFTMVAVENGKPTPMPKYEPKTEVEIRRYEGALKRKEM
RTRGYLKSGKHEGV
>Mature_173_residues
PQIQSSHSSHFDFTIDTADRTKLLMSYLVVPTTANFNNVMHGGELLNLLDKVAYVCSTRYCAKGTVTLSVDGVTFKYPIP
VGNLLTFLASINYVGNTSCEVGIKVLSEDIKTREITHTNSCYFTMVAVENGKPTPMPKYEPKTEVEIRRYEGALKRKEMR
TRGYLKSGKHEGV

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

Organism=Homo sapiens, GI22165355, Length=140, Percent_Identity=31.4285714285714, Blast_Score=73, Evalue=1e-13,
Organism=Homo sapiens, GI18640736, Length=149, Percent_Identity=31.5436241610738, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI22165400, Length=140, Percent_Identity=31.4285714285714, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI32528286, Length=128, Percent_Identity=29.6875, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI32528284, Length=128, Percent_Identity=29.6875, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI75709208, Length=128, Percent_Identity=29.6875, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI32528282, Length=128, Percent_Identity=29.6875, Blast_Score=71, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 19465; Mature: 19333

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQIQSSHSSHFDFTIDTADRTKLLMSYLVVPTTANFNNVMHGGELLNLLDKVAYVCSTR
CCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCHHHCHHHHHHHHHHHHHHHCCC
YCAKGTVTLSVDGVTFKYPIPVGNLLTFLASINYVGNTSCEVGIKVLSEDIKTREITHTN
EECCCEEEEEECCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEECC
SCYFTMVAVENGKPTPMPKYEPKTEVEIRRYEGALKRKEMRTRGYLKSGKHEGV
CEEEEEEEEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PQIQSSHSSHFDFTIDTADRTKLLMSYLVVPTTANFNNVMHGGELLNLLDKVAYVCSTR
CCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCHHHCHHHHHHHHHHHHHHHCCC
YCAKGTVTLSVDGVTFKYPIPVGNLLTFLASINYVGNTSCEVGIKVLSEDIKTREITHTN
EECCCEEEEEECCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEECC
SCYFTMVAVENGKPTPMPKYEPKTEVEIRRYEGALKRKEMRTRGYLKSGKHEGV
CEEEEEEEEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]