Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
---|---|
Accession | NC_008086 |
Length | 1,596,366 |
Click here to switch to the map view.
The map label for this gene is 108563300
Identifier: 108563300
GI number: 108563300
Start: 913376
End: 913582
Strand: Direct
Name: 108563300
Synonym: HPAG1_0875
Alternate gene names: NA
Gene position: 913376-913582 (Clockwise)
Preceding gene: 108563297
Following gene: 108563302
Centisome position: 57.22
GC content: 29.95
Gene sequence:
>207_bases TTGTTTTGTAAAGCAGTGGGGATTGGCAAAAAGAAAGATCAAACCCCCCAAAAAAAAAAGAGTTTAAAAAAAAAGTTCAA AAATTTAAAACAAAGGGTTCAAAACAAAGGGTTCTCCCCTAAAAAGGGAGTTTCAAAACAAAAAGAGTTTAAAAAAAAAG TTCAAAAATTTAAAACAAAGGGTTTAAAACAAAGGGTTCTCCCCTAA
Upstream 100 bases:
>100_bases TTTTGGCGGTGGTGTTAGGCATGCTTATTCCTTTTAAAATATAAGATAAGTTCATTATAGCGCAAGCGATAGAGCGGGAT AAGCTAGAAAACTAAAAACT
Downstream 100 bases:
>100_bases AAAGGGAGTTTCAAAAAGGGAATTTCACAAAGGGTTTTTAGCTTCTAGTAAGCGAACACGTAATTCAAATACACGCTATA GAGCCTTCGGTATTTGAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 68; Mature: 68
Protein sequence:
>68_residues MFCKAVGIGKKKDQTPQKKKSLKKKFKNLKQRVQNKGFSPKKGVSKQKEFKKKVQKFKTKGLKQRVLP
Sequences:
>Translated_68_residues MFCKAVGIGKKKDQTPQKKKSLKKKFKNLKQRVQNKGFSPKKGVSKQKEFKKKVQKFKTKGLKQRVLP >Mature_68_residues MFCKAVGIGKKKDQTPQKKKSLKKKFKNLKQRVQNKGFSPKKGVSKQKEFKKKVQKFKTKGLKQRVLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7919; Mature: 7919
Theoretical pI: Translated: 11.77; Mature: 11.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFCKAVGIGKKKDQTPQKKKSLKKKFKNLKQRVQNKGFSPKKGVSKQKEFKKKVQKFKTK CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH GLKQRVLP HHHHHCCC >Mature Secondary Structure MFCKAVGIGKKKDQTPQKKKSLKKKFKNLKQRVQNKGFSPKKGVSKQKEFKKKVQKFKTK CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH GLKQRVLP HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA