Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
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Accession | NC_008086 |
Length | 1,596,366 |
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The map label for this gene is guaC [H]
Identifier: 108563263
GI number: 108563263
Start: 874492
End: 875469
Strand: Direct
Name: guaC [H]
Synonym: HPAG1_0838
Alternate gene names: 108563263
Gene position: 874492-875469 (Clockwise)
Preceding gene: 108563259
Following gene: 108563280
Centisome position: 54.78
GC content: 41.92
Gene sequence:
>978_bases TTGAAAGTATTTGATTACGAAGATGTCCAACTCATTCCTAATAAATGCATCGTGAATAGCCGTTCAGAATGCGATACGAC TGTTATTCTAGGCAAACATGCGTTTAAAATGCCTATAGTCCCAGCCAACATGCAGACAATCATCAACGAACCGATCGCAG AATTTCTAGCAGAAAATGGCTATTTCTACATCATGCACCGCTTTAATGGATCGACAAGAATCCCGTTTGTCAAAAAAATG AAAGAACGCCAATGGATCAGCTCAATCAGCGTGGGGGTGAAAAAGGAAGAATATCTTTTGATAGAAGAGTTAGCCAAACA AGGATTAACGCCAGACTATATCACAATCGATATTGCGCATGGTCATTCAAATTCTGTCATTGAAATGATCCAACGCATCA AAACGCGTTTGCCAGAAACTTTTGTGATTGCCGGGAATGTTGGCACGCCAGAAGCAGTCCGTGAATTAGAGAACGCCGGT GCTGACGCTACGAAAGTTGGCATCGGACCTGGGAAAGTGTGTATCACTAAAATCAAAACAGGCTTTGGTACAGGTGGTTG GCAACTAGCGGCTCTTAGGTGGTGCGCTAAAGCAGCAAGAAAGCCCATTATTGCAGATGGCGGTATTCGCACGCATGGGG ATATTGCAAAATCAATACGCTTTGGCGCGACAATGGTAATGATTGGCTCGCTTTTTGCAGGGCATGAAGAATCATCTGGA GAAACAAAAATAGAAAATGGTGTCGCATATAAAGAATATTTCGGTTCGGCATCAGAGTTCCAAAAAGGTGAAAAGAAAAA TGTTGAAGGCAAGAAAATTTGGATCCAGCATAAAGGATCATTAAAAGACACGCTGGTTGAAATGCAACAAGATTTGCAAT CTTCCATCTCCTATGCTGGCGGGAGAGACCTTGAAGCGATTCGAAAAGTGGATTATGTCATTGTGAAAAATTCAATTTTC AATGGGGACACAATCTAA
Upstream 100 bases:
>100_bases TTTGACGCCCAAAATTTGATCGAGCCTATATCATTTCCTCTTGATTTTTTATTCAATTTAAGGTAAAAATAATGTTTTAA AGCAAAAAAGGATCAAGTCA
Downstream 100 bases:
>100_bases AAAGATTGATAAAACGAAAGCAAAAGACAGAAAAAAGGGTTTTCAACCTCTTTTTCAAGCGATTTGCTTTGACTTGGGTT TTTGTTGTTTTTTGATCCTT
Product: guanosine 5'-monophosphate oxidoreductase
Products: NA
Alternate protein names: Guanosine 5'-monophosphate oxidoreductase; Guanosine monophosphate reductase [H]
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MKVFDYEDVQLIPNKCIVNSRSECDTTVILGKHAFKMPIVPANMQTIINEPIAEFLAENGYFYIMHRFNGSTRIPFVKKM KERQWISSISVGVKKEEYLLIEELAKQGLTPDYITIDIAHGHSNSVIEMIQRIKTRLPETFVIAGNVGTPEAVRELENAG ADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAARKPIIADGGIRTHGDIAKSIRFGATMVMIGSLFAGHEESSG ETKIENGVAYKEYFGSASEFQKGEKKNVEGKKIWIQHKGSLKDTLVEMQQDLQSSISYAGGRDLEAIRKVDYVIVKNSIF NGDTI
Sequences:
>Translated_325_residues MKVFDYEDVQLIPNKCIVNSRSECDTTVILGKHAFKMPIVPANMQTIINEPIAEFLAENGYFYIMHRFNGSTRIPFVKKM KERQWISSISVGVKKEEYLLIEELAKQGLTPDYITIDIAHGHSNSVIEMIQRIKTRLPETFVIAGNVGTPEAVRELENAG ADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAARKPIIADGGIRTHGDIAKSIRFGATMVMIGSLFAGHEESSG ETKIENGVAYKEYFGSASEFQKGEKKNVEGKKIWIQHKGSLKDTLVEMQQDLQSSISYAGGRDLEAIRKVDYVIVKNSIF NGDTI >Mature_325_residues MKVFDYEDVQLIPNKCIVNSRSECDTTVILGKHAFKMPIVPANMQTIINEPIAEFLAENGYFYIMHRFNGSTRIPFVKKM KERQWISSISVGVKKEEYLLIEELAKQGLTPDYITIDIAHGHSNSVIEMIQRIKTRLPETFVIAGNVGTPEAVRELENAG ADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAARKPIIADGGIRTHGDIAKSIRFGATMVMIGSLFAGHEESSG ETKIENGVAYKEYFGSASEFQKGEKKNVEGKKIWIQHKGSLKDTLVEMQQDLQSSISYAGGRDLEAIRKVDYVIVKNSIF NGDTI
Specific function: Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides [H]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IMPDH/GMPR family. GuaC type 2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI50541954, Length=338, Percent_Identity=32.8402366863905, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI50541952, Length=338, Percent_Identity=32.8402366863905, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI50541948, Length=338, Percent_Identity=32.8402366863905, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI50541956, Length=338, Percent_Identity=32.8402366863905, Blast_Score=165, Evalue=4e-41, Organism=Homo sapiens, GI156104880, Length=338, Percent_Identity=31.0650887573964, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI217035148, Length=255, Percent_Identity=32.9411764705882, Blast_Score=121, Evalue=7e-28, Organism=Homo sapiens, GI217035146, Length=255, Percent_Identity=33.3333333333333, Blast_Score=121, Evalue=7e-28, Organism=Homo sapiens, GI217035150, Length=255, Percent_Identity=33.3333333333333, Blast_Score=121, Evalue=8e-28, Organism=Homo sapiens, GI217035152, Length=255, Percent_Identity=33.3333333333333, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI34328930, Length=255, Percent_Identity=33.3333333333333, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI156616279, Length=255, Percent_Identity=33.3333333333333, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI34328928, Length=255, Percent_Identity=33.3333333333333, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI66933016, Length=255, Percent_Identity=31.7647058823529, Blast_Score=119, Evalue=5e-27, Organism=Escherichia coli, GI1786293, Length=344, Percent_Identity=30.2325581395349, Blast_Score=146, Evalue=2e-36, Organism=Escherichia coli, GI1788855, Length=220, Percent_Identity=38.1818181818182, Blast_Score=113, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17560440, Length=323, Percent_Identity=31.8885448916409, Blast_Score=155, Evalue=2e-38, Organism=Caenorhabditis elegans, GI71994385, Length=262, Percent_Identity=30.5343511450382, Blast_Score=95, Evalue=5e-20, Organism=Caenorhabditis elegans, GI71994389, Length=188, Percent_Identity=34.5744680851064, Blast_Score=94, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6322012, Length=252, Percent_Identity=30.1587301587302, Blast_Score=96, Evalue=5e-21, Organism=Saccharomyces cerevisiae, GI6323585, Length=253, Percent_Identity=29.2490118577075, Blast_Score=96, Evalue=6e-21, Organism=Saccharomyces cerevisiae, GI6323464, Length=253, Percent_Identity=29.2490118577075, Blast_Score=95, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6319352, Length=138, Percent_Identity=32.6086956521739, Blast_Score=66, Evalue=9e-12, Organism=Drosophila melanogaster, GI24641071, Length=259, Percent_Identity=32.046332046332, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI24641073, Length=259, Percent_Identity=32.046332046332, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI28571163, Length=259, Percent_Identity=32.046332046332, Blast_Score=116, Evalue=2e-26,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR005994 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00478 IMPDH [H]
EC number: =1.7.1.7 [H]
Molecular weight: Translated: 35949; Mature: 35949
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVFDYEDVQLIPNKCIVNSRSECDTTVILGKHAFKMPIVPANMQTIINEPIAEFLAENG CCCCCCCCCEECCCHHCCCCCCCCCEEEEECCCCEECCCCCCHHHHHHHHHHHHHHHCCC YFYIMHRFNGSTRIPFVKKMKERQWISSISVGVKKEEYLLIEELAKQGLTPDYITIDIAH EEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEEC GHSNSVIEMIQRIKTRLPETFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKIKT CCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCEEECCCCCCEEEEEECC GFGTGGWQLAALRWCAKAARKPIIADGGIRTHGDIAKSIRFGATMVMIGSLFAGHEESSG CCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC ETKIENGVAYKEYFGSASEFQKGEKKNVEGKKIWIQHKGSLKDTLVEMQQDLQSSISYAG CCHHHCCCCHHHHCCCHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCC GRDLEAIRKVDYVIVKNSIFNGDTI CCCHHHHHHHCEEEEECCCCCCCCC >Mature Secondary Structure MKVFDYEDVQLIPNKCIVNSRSECDTTVILGKHAFKMPIVPANMQTIINEPIAEFLAENG CCCCCCCCCEECCCHHCCCCCCCCCEEEEECCCCEECCCCCCHHHHHHHHHHHHHHHCCC YFYIMHRFNGSTRIPFVKKMKERQWISSISVGVKKEEYLLIEELAKQGLTPDYITIDIAH EEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEEC GHSNSVIEMIQRIKTRLPETFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKIKT CCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCEEECCCCCCEEEEEECC GFGTGGWQLAALRWCAKAARKPIIADGGIRTHGDIAKSIRFGATMVMIGSLFAGHEESSG CCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC ETKIENGVAYKEYFGSASEFQKGEKKNVEGKKIWIQHKGSLKDTLVEMQQDLQSSISYAG CCHHHCCCCHHHHCCCHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCC GRDLEAIRKVDYVIVKNSIFNGDTI CCCHHHHHHHCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9252185 [H]