Click here to switch to the map view.

The map label for this gene is phnA [H]

Identifier: 108563280

GI number: 108563280

Start: 889234

End: 889563

Strand: Direct

Name: phnA [H]

Synonym: HPAG1_0855

Alternate gene names: 108563280

Gene position: 889234-889563 (Clockwise)

Preceding gene: 108563263

Following gene: 108563284

Centisome position: 55.7

GC content: 36.97

Gene sequence:

>330_bases
ATGCAAGATTTACCCCCATGCCCTAAATGCAACGACGCCTACACCTACCATGATGGCGCGCAACTAATTTGCCCTAGCTG
TTTGTATGAATGGAATGAAAATGAAGTTAATGATGAAGAATTGATCGTTAAAGATTGCCACAATAATCTTTTACGAAATG
GGGACTCGGTCATTCTCATTAAGGATTTAAAGGTTAAAGGTTCATCTTTAGTGCTTAAAAAAGGCACCAAAATCAAAAAT
ATCAAGCTTGTCAATAGCGATCACAATGTGGATTGTAAAATAGAAGGGCAGAGCTTGTCTTTAAAATCTGAATTCCTCAA
AAAAGCTTAG

Upstream 100 bases:

>100_bases
CTTAATAGAGTTGATACTTGTCAAAATAAAGCGTTTTATAGTTTTATAACCTTGATTTAGGTAATATCATCAACCTGATA
CCACAATAAGGACGATTATC

Downstream 100 bases:

>100_bases
GAAAATACAAAAGCTTAAAAAAAGCTTAGTGGCTTTTTAAGCTTGTAAAGATCATTTTTTAGAAAAAATCAACTTATCCA
GCTTGAAAAAAATCAACGCT

Product: alkylphosphonate uptake protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MQDLPPCPKCNDAYTYHDGAQLICPSCLYEWNENEVNDEELIVKDCHNNLLRNGDSVILIKDLKVKGSSLVLKKGTKIKN
IKLVNSDHNVDCKIEGQSLSLKSEFLKKA

Sequences:

>Translated_109_residues
MQDLPPCPKCNDAYTYHDGAQLICPSCLYEWNENEVNDEELIVKDCHNNLLRNGDSVILIKDLKVKGSSLVLKKGTKIKN
IKLVNSDHNVDCKIEGQSLSLKSEFLKKA
>Mature_109_residues
MQDLPPCPKCNDAYTYHDGAQLICPSCLYEWNENEVNDEELIVKDCHNNLLRNGDSVILIKDLKVKGSSLVLKKGTKIKN
IKLVNSDHNVDCKIEGQSLSLKSEFLKKA

Specific function: Unknown

COG id: COG2824

COG function: function code P; Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790547, Length=108, Percent_Identity=63.8888888888889, Blast_Score=134, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004624
- InterPro:   IPR013988
- InterPro:   IPR013987 [H]

Pfam domain/function: PF03831 PhnA; PF08274 PhnA_Zn_Ribbon [H]

EC number: NA

Molecular weight: Translated: 12274; Mature: 12274

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
5.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDLPPCPKCNDAYTYHDGAQLICPSCLYEWNENEVNDEELIVKDCHNNLLRNGDSVILI
CCCCCCCCCCCCCEEEECCCEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEE
KDLKVKGSSLVLKKGTKIKNIKLVNSDHNVDCKIEGQSLSLKSEFLKKA
EECEECCCEEEEECCCEEEEEEEECCCCCEEEEEECCCCCHHHHHHHCC
>Mature Secondary Structure
MQDLPPCPKCNDAYTYHDGAQLICPSCLYEWNENEVNDEELIVKDCHNNLLRNGDSVILI
CCCCCCCCCCCCCEEEECCCEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEE
KDLKVKGSSLVLKKGTKIKNIKLVNSDHNVDCKIEGQSLSLKSEFLKKA
EECEECCCEEEEECCCEEEEEEEECCCCCEEEEEECCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]