Click here to switch to the map view.

The map label for this gene is motA

Identifier: 108563225

GI number: 108563225

Start: 836433

End: 837206

Strand: Direct

Name: motA

Synonym: HPAG1_0800

Alternate gene names: 108563225

Gene position: 836433-837206 (Clockwise)

Preceding gene: 108563224

Following gene: 108563226

Centisome position: 52.4

GC content: 43.8

Gene sequence:

>774_bases
TTGGATTTATCAACCATACTAGGCTTGGTATTGGCGGTCGCTTCTATTTCGCTAGGCGATATTTTAGAAGATGGCAACCC
GTTGCACATTATCCATTTGAGTTCAGTCATCATCATCGTGCCCACTTCGCTTTTTGCCGCTATGACAGGCACGCATGCGC
GTTACGTGAAAGCCGCTTACAAAGAGATAAAAATTGTTTTTTTAAACCCTAAAATCAATTTAAACGAAACCATCAAAAAT
TTAGTGGAATTAGCCACTCTGGCTAGAAAAGATGGGGTGTTGAGTTTAGAGGGGCGAGTGGCGCAAATTGAAGACGATTT
CACCCGTAATGGCTTGTCTATGATCATAGATGGCAAGGATTTAAAATCCGTTAAGGAAAGCTTAGAAATCAGCATTGAAG
AAATGGAAGAGTATTACCACGGCGCCGCTCATTATTGGGAAACGGCCGGCGAGACCGCTCCTACTATGGGGTTAGTGGGG
GCGGTTATGGGGCTTATGTTAGCCTTGCAAAAACTAGACAACCCGGCTGAAATGGCAGCAGGGATCGCTGGGGCTTTTAC
GGCTACTGTTACAGGGATTATGTGTTCTTATGCGATTTTTGGCCCTTTTGGGCATAAGCTCAAGGCTAAGTCTAAAGACA
TTATCAAAGAAAAAACCGTTCTTTTAGAGGGGATTTTAGGCATCGCTAATGGGGAAAACCCAAGGGATTTAGAAAACAAA
CTCTTAAACTACATCGCTCCCGGTGAGCCTAAAAAATCCCAATTTGAGGGCTAA

Upstream 100 bases:

>100_bases
TAAAAAAATTCAAGCACCCAAAAACCCTGAATGTAGGGTTTGTGGCGCACATAAAATCACGCATTTACAGGATTATGAAA
TTTAGATTAAGGGGTAAGTT

Downstream 100 bases:

>100_bases
AGATGGCTAAGAAAAACAAACCCACCGAATGCCCCGCCGGCGAAAAATGGGCGGTTCCTTATGCGGACTTTTTGTCGTTG
TTGCTCGCGCTTTTTATCGC

Product: flagellar motor protein MotA

Products: NA

Alternate protein names: Chemotaxis protein MotA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MDLSTILGLVLAVASISLGDILEDGNPLHIIHLSSVIIIVPTSLFAAMTGTHARYVKAAYKEIKIVFLNPKINLNETIKN
LVELATLARKDGVLSLEGRVAQIEDDFTRNGLSMIIDGKDLKSVKESLEISIEEMEEYYHGAAHYWETAGETAPTMGLVG
AVMGLMLALQKLDNPAEMAAGIAGAFTATVTGIMCSYAIFGPFGHKLKAKSKDIIKEKTVLLEGILGIANGENPRDLENK
LLNYIAPGEPKKSQFEG

Sequences:

>Translated_257_residues
MDLSTILGLVLAVASISLGDILEDGNPLHIIHLSSVIIIVPTSLFAAMTGTHARYVKAAYKEIKIVFLNPKINLNETIKN
LVELATLARKDGVLSLEGRVAQIEDDFTRNGLSMIIDGKDLKSVKESLEISIEEMEEYYHGAAHYWETAGETAPTMGLVG
AVMGLMLALQKLDNPAEMAAGIAGAFTATVTGIMCSYAIFGPFGHKLKAKSKDIIKEKTVLLEGILGIANGENPRDLENK
LLNYIAPGEPKKSQFEG
>Mature_257_residues
MDLSTILGLVLAVASISLGDILEDGNPLHIIHLSSVIIIVPTSLFAAMTGTHARYVKAAYKEIKIVFLNPKINLNETIKN
LVELATLARKDGVLSLEGRVAQIEDDFTRNGLSMIIDGKDLKSVKESLEISIEEMEEYYHGAAHYWETAGETAPTMGLVG
AVMGLMLALQKLDNPAEMAAGIAGAFTATVTGIMCSYAIFGPFGHKLKAKSKDIIKEKTVLLEGILGIANGENPRDLENK
LLNYIAPGEPKKSQFEG

Specific function: MotA and MotB comprise the stator element of the flagellar motor complex. Required for rotation of the flagellar motor. Probable transmembrane proton channel

COG id: COG1291

COG function: function code N; Flagellar motor component

Gene ontology:

Cell location: Cell inner membrane; Multi- pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MotA family

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): MOTA_HELPJ (P65411)

Other databases:

- EMBL:   AE001439
- RefSeq:   NP_223469.1
- STRING:   P65411
- GeneID:   890144
- GenomeReviews:   AE001439_GR
- KEGG:   hpj:jhp0751
- eggNOG:   COG1291
- HOGENOM:   HBG691813
- OMA:   TFAAVCI
- ProtClustDB:   PRK08456
- BioCyc:   HPYL85963:JHP0751-MONOMER
- GO:   GO:0006935
- InterPro:   IPR000540
- InterPro:   IPR002898

Pfam domain/function: PF01618 MotA_ExbB

EC number: NA

Molecular weight: Translated: 27711; Mature: 27711

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS01307 MOTA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x177915dc)-; HASH(0x184a09bc)-; HASH(0x18489894)-; HASH(0x15f63a14)-;

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLSTILGLVLAVASISLGDILEDGNPLHIIHLSSVIIIVPTSLFAAMTGTHARYVKAAY
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEHHHHHHHHHCCHHHHHHHHH
KEIKIVFLNPKINLNETIKNLVELATLARKDGVLSLEGRVAQIEDDFTRNGLSMIIDGKD
HCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEECCCEEEHHHHHHCCCCEEEECCHH
LKSVKESLEISIEEMEEYYHGAAHYWETAGETAPTMGLVGAVMGLMLALQKLDNPAEMAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH
GIAGAFTATVTGIMCSYAIFGPFGHKLKAKSKDIIKEKTVLLEGILGIANGENPRDLENK
HHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LLNYIAPGEPKKSQFEG
HHHHCCCCCCCCCCCCH
>Mature Secondary Structure
MDLSTILGLVLAVASISLGDILEDGNPLHIIHLSSVIIIVPTSLFAAMTGTHARYVKAAY
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEHHHHHHHHHCCHHHHHHHHH
KEIKIVFLNPKINLNETIKNLVELATLARKDGVLSLEGRVAQIEDDFTRNGLSMIIDGKD
HCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEECCCEEEHHHHHHCCCCEEEECCHH
LKSVKESLEISIEEMEEYYHGAAHYWETAGETAPTMGLVGAVMGLMLALQKLDNPAEMAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH
GIAGAFTATVTGIMCSYAIFGPFGHKLKAKSKDIIKEKTVLLEGILGIANGENPRDLENK
HHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LLNYIAPGEPKKSQFEG
HHHHCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682