Click here to switch to the map view.

The map label for this gene is motB [H]

Identifier: 108563226

GI number: 108563226

Start: 837209

End: 837982

Strand: Direct

Name: motB [H]

Synonym: HPAG1_0801

Alternate gene names: 108563226

Gene position: 837209-837982 (Clockwise)

Preceding gene: 108563225

Following gene: 108563227

Centisome position: 52.44

GC content: 41.34

Gene sequence:

>774_bases
ATGGCTAAGAAAAACAAACCCACCGAATGCCCCGCCGGCGAAAAATGGGCGGTTCCTTATGCGGACTTTTTGTCGTTGTT
GCTCGCGCTTTTTATCGCTCTTTATGCCATTTCAGCGGTCAATAAATCCAAAGTGGAAGCCTTAAAAACCGAATTTATTA
AGATTTTTAATTACGCTCCCAAGCCAGAGGCGATGCAGCCGGTTGTAGTGATCCCCCCTGATTCAGGGAAAGAAGAAGAG
CAAATGGCGAGCGAAAGCTCCAAGCCGGCTTCGCAAAATACCGAAACAAAAGCCATTATCGCTCGCAAAGGCGAAGGCAG
TGTTTTAGAGCAAATTGATCAAGGCTCTATTTTAAAGCTCCCTTCTAATTTGTTGTTTGAAAACGCCACATCAGATTCTA
TCAATCAAGACATGATGCTTTATATTGAACGGATCGCTAAAATCATTCAAAAACTCCCTAAAAGGGTGCATATTAATGTG
AGAGGTTTTACGGATAATACGCCTTTAGTTAAAACCCGTTTTAAAAGCCATTATGAATTAGCCGCCAATCGCGCTTATAG
GGTGATGAAAGTCCTTATACAATACGGCGTAAATCCTAACCAATTGTCTTTTTCTTCTTACGGCTCTACCAACCCTATCG
CGCCTAATGACTCCCTAGAAAACAGAATGAAAAACAATCGTGTGGAAATCTTTTTTTCAACCGATGCGAACGATTTGAGT
AAGATCCATTCTATTTTAGATGAAGAATTCAATCCCCACAAACAGCAAGAATGA

Upstream 100 bases:

>100_bases
TAGGCATCGCTAATGGGGAAAACCCAAGGGATTTAGAAAACAAACTCTTAAACTACATCGCTCCCGGTGAGCCTAAAAAA
TCCCAATTTGAGGGCTAAAG

Downstream 100 bases:

>100_bases
ATCGCATGAAACGAATTTTTTTGTCAATCTTTTTGTTGTTAGCGAGCCTTACTGCTAGAGAGAAGGACGCTTCTTCAAAC
CTTTTTGATTTGATTGATAA

Product: flagellar motor protein MotB

Products: NA

Alternate protein names: Chemotaxis protein MotB [H]

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MAKKNKPTECPAGEKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEE
QMASESSKPASQNTETKAIIARKGEGSVLEQIDQGSILKLPSNLLFENATSDSINQDMMLYIERIAKIIQKLPKRVHINV
RGFTDNTPLVKTRFKSHYELAANRAYRVMKVLIQYGVNPNQLSFSSYGSTNPIAPNDSLENRMKNNRVEIFFSTDANDLS
KIHSILDEEFNPHKQQE

Sequences:

>Translated_257_residues
MAKKNKPTECPAGEKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEE
QMASESSKPASQNTETKAIIARKGEGSVLEQIDQGSILKLPSNLLFENATSDSINQDMMLYIERIAKIIQKLPKRVHINV
RGFTDNTPLVKTRFKSHYELAANRAYRVMKVLIQYGVNPNQLSFSSYGSTNPIAPNDSLENRMKNNRVEIFFSTDANDLS
KIHSILDEEFNPHKQQE
>Mature_256_residues
AKKNKPTECPAGEKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQ
MASESSKPASQNTETKAIIARKGEGSVLEQIDQGSILKLPSNLLFENATSDSINQDMMLYIERIAKIIQKLPKRVHINVR
GFTDNTPLVKTRFKSHYELAANRAYRVMKVLIQYGVNPNQLSFSSYGSTNPIAPNDSLENRMKNNRVEIFFSTDANDLSK
IHSILDEEFNPHKQQE

Specific function: MotA and MotB comprise the stator element of the flagellar motor complex. Required for the rotation of the flagellar motor. Might be a linker that fastens the torque- generating machinery to the cell wall [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell inner membrane; Single- pass type II membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 28891; Mature: 28760

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKNKPTECPAGEKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAP
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
KPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKAIIARKGEGSVLEQIDQGSILKL
CCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHCCCCCEEEC
PSNLLFENATSDSINQDMMLYIERIAKIIQKLPKRVHINVRGFTDNTPLVKTRFKSHYEL
CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHEEEEEECCCCCCCHHHHHHHHHHHH
AANRAYRVMKVLIQYGVNPNQLSFSSYGSTNPIAPNDSLENRMKNNRVEIFFSTDANDLS
HHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCHHHHH
KIHSILDEEFNPHKQQE
HHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AKKNKPTECPAGEKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAP
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
KPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKAIIARKGEGSVLEQIDQGSILKL
CCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHCCCCCEEEC
PSNLLFENATSDSINQDMMLYIERIAKIIQKLPKRVHINVRGFTDNTPLVKTRFKSHYEL
CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHEEEEEECCCCCCCHHHHHHHHHHHH
AANRAYRVMKVLIQYGVNPNQLSFSSYGSTNPIAPNDSLENRMKNNRVEIFFSTDANDLS
HHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCHHHHH
KIHSILDEEFNPHKQQE
HHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]