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The map label for this gene is 108563199

Identifier: 108563199

GI number: 108563199

Start: 811657

End: 813156

Strand: Direct

Name: 108563199

Synonym: HPAG1_0774

Alternate gene names: NA

Gene position: 811657-813156 (Clockwise)

Preceding gene: 108563198

Following gene: 108563216

Centisome position: 50.84

GC content: 42.53

Gene sequence:

>1500_bases
ATGAACTATAAAGTTGCATCTGCTAAAAATATCGCAACGCTTCTTTTTTTATTCTCTTCTCAAAGTCAAGCTTTTGATTT
GGGTAAAATCGCTAAAATTAAAGCGGGTGCTGAAAGTTTCTCTAAAGTCGGTTTCAATAACAAACCTATCAACACTAATA
AAGGGCTTTACCCTACCGAAACCTTTATGACGATCATGGCTTACATGCAAGTGGATTTTACGGAACTCTTGCCCAAAAGT
GCTACGGCTAACGGGCACCATTTAGACGGGAGTCTTGGAGGTTGGGGGGGTGCTGTAATTTATGATAGCACTAAGGATTT
TATTAACGAAGTTACAGGGAAAACCTATGGGGCTATGGCTTGGAACTATGTGGGCTATTGGGGCGGTCTTGTGGGGCAAA
AACCATGGGCTAGTTGCGGGTTAGCCACAGGGAATTTGACTCAAGGCCAATACGATAAGATGACTCAAGCTGAAATGACG
CAGTTGTCTAATCAAGAAGCTTTAGAGGCTTCCACTTGCGCAAAAGGTTATGCCGATCACACCAGAAACTATGTGATTTA
TAACGCCTACTTGCGCTACAACTACAAAGATATTTTTGAAATTAGGGGCGGGAGATACGAATCCCCAGCGGATTATATGA
GCGGTTACAACCAAGGCTTGGACATGACCTTAAACTTAGGGAATTTCAAATTCTGGTGGTTTAGCTCTTTTGGCCGTGGC
TTTGCCTATAACGAGTGGCTTTATAATTTCTATTCGCCTAAAACCTACACTCTTAAAAACGGGCAAACCATAAACCCTGG
GGTGCATGCCTTTTATATCATTTGGAATTACAAGGGTTGGAGCATTCAGCCTTTTGTCTATTTTTCACCCTTTAACGAAT
ACGACCCTAACTTTACGATCACTTATGATAGTAACCCCACTTTTACTGGCTTAGGGTTTCGCTCTCAAACCGATGTTACC
GTGCTCAATCCTTTTTACGCTAAAAGTTTTTGGGACACCTATCAATTTGGCATGCCAGCCGGTAAGAACGCACACAGCTT
GATGATCAAACAAAAGTTTGAATGGAATGAATACAATTTTGGTTTTGGGATTTATAAATCCTTTGGGAACGCTAACTGGA
TGATAGGCTACCATGGTAACCGCTTGGGCTTTGACTTTTGGACGAACACCGTTTATGCAAACACCCTTAACTCTTTGTCT
TACATGATGGATGCGAACGCTTTCACCGTGTTTGCCTTTGGCGGTGGGGTGCATAGGAAACTCCTTTGGGGCTTATTGGG
GCGTTTGACTTATGGGCCTAGGGCGAACGAACAAGTCCTATCGCTCAACTTGGGCTATAAATTCACTAAAAATTTCTCAG
CCGACATTAAATTTGAATATTATAATGTGTTGATGCATCAAGGCTATAAAATGGGGTGGAACGGGCCAAAATTAGACAGC
CAACCCGCCACCGATCAAGACAGGAGTCATATTTTCACCGAGATCGTGTGGAAGCTTTAA

Upstream 100 bases:

>100_bases
AACAGACTGATTAGATGTTTAAGATCTGTAAGAAAAAATTTTCTTTGAACGGTGTTGGCTTACTCTATTTAGAATTTTTG
GTTTATACTGAGGGTTAAAC

Downstream 100 bases:

>100_bases
ACCCTCTTTAAATAACAACCCTTTAAGGGTTTGTTAAAACGCCTAGCAAAAAACAACCATAAAAACCACTTTATCGCCTA
TTTTAGGGTTTATTTTTAAA

Product: outer membrane protein HofF

Products: NA

Alternate protein names: Outer Membrane Protein; Hof Family Outer Membrane Protein; Outer Membrane Protein HofH; Outermembrane Protein HofE; Outer Membrane Protein HofF; Outer Membrane Protein HofA; Outer Membrane Protein HofC; Outer Membrane Protein HofB; Outer Membrane Protein HofD

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MNYKVASAKNIATLLFLFSSQSQAFDLGKIAKIKAGAESFSKVGFNNKPINTNKGLYPTETFMTIMAYMQVDFTELLPKS
ATANGHHLDGSLGGWGGAVIYDSTKDFINEVTGKTYGAMAWNYVGYWGGLVGQKPWASCGLATGNLTQGQYDKMTQAEMT
QLSNQEALEASTCAKGYADHTRNYVIYNAYLRYNYKDIFEIRGGRYESPADYMSGYNQGLDMTLNLGNFKFWWFSSFGRG
FAYNEWLYNFYSPKTYTLKNGQTINPGVHAFYIIWNYKGWSIQPFVYFSPFNEYDPNFTITYDSNPTFTGLGFRSQTDVT
VLNPFYAKSFWDTYQFGMPAGKNAHSLMIKQKFEWNEYNFGFGIYKSFGNANWMIGYHGNRLGFDFWTNTVYANTLNSLS
YMMDANAFTVFAFGGGVHRKLLWGLLGRLTYGPRANEQVLSLNLGYKFTKNFSADIKFEYYNVLMHQGYKMGWNGPKLDS
QPATDQDRSHIFTEIVWKL

Sequences:

>Translated_499_residues
MNYKVASAKNIATLLFLFSSQSQAFDLGKIAKIKAGAESFSKVGFNNKPINTNKGLYPTETFMTIMAYMQVDFTELLPKS
ATANGHHLDGSLGGWGGAVIYDSTKDFINEVTGKTYGAMAWNYVGYWGGLVGQKPWASCGLATGNLTQGQYDKMTQAEMT
QLSNQEALEASTCAKGYADHTRNYVIYNAYLRYNYKDIFEIRGGRYESPADYMSGYNQGLDMTLNLGNFKFWWFSSFGRG
FAYNEWLYNFYSPKTYTLKNGQTINPGVHAFYIIWNYKGWSIQPFVYFSPFNEYDPNFTITYDSNPTFTGLGFRSQTDVT
VLNPFYAKSFWDTYQFGMPAGKNAHSLMIKQKFEWNEYNFGFGIYKSFGNANWMIGYHGNRLGFDFWTNTVYANTLNSLS
YMMDANAFTVFAFGGGVHRKLLWGLLGRLTYGPRANEQVLSLNLGYKFTKNFSADIKFEYYNVLMHQGYKMGWNGPKLDS
QPATDQDRSHIFTEIVWKL
>Mature_499_residues
MNYKVASAKNIATLLFLFSSQSQAFDLGKIAKIKAGAESFSKVGFNNKPINTNKGLYPTETFMTIMAYMQVDFTELLPKS
ATANGHHLDGSLGGWGGAVIYDSTKDFINEVTGKTYGAMAWNYVGYWGGLVGQKPWASCGLATGNLTQGQYDKMTQAEMT
QLSNQEALEASTCAKGYADHTRNYVIYNAYLRYNYKDIFEIRGGRYESPADYMSGYNQGLDMTLNLGNFKFWWFSSFGRG
FAYNEWLYNFYSPKTYTLKNGQTINPGVHAFYIIWNYKGWSIQPFVYFSPFNEYDPNFTITYDSNPTFTGLGFRSQTDVT
VLNPFYAKSFWDTYQFGMPAGKNAHSLMIKQKFEWNEYNFGFGIYKSFGNANWMIGYHGNRLGFDFWTNTVYANTLNSLS
YMMDANAFTVFAFGGGVHRKLLWGLLGRLTYGPRANEQVLSLNLGYKFTKNFSADIKFEYYNVLMHQGYKMGWNGPKLDS
QPATDQDRSHIFTEIVWKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56896; Mature: 56896

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYKVASAKNIATLLFLFSSQSQAFDLGKIAKIKAGAESFSKVGFNNKPINTNKGLYPTE
CCEECCCCCCCEEEEEEECCCCCCCCCCCCEEECCCHHHHHHCCCCCCCCCCCCCCCCHH
TFMTIMAYMQVDFTELLPKSATANGHHLDGSLGGWGGAVIYDSTKDFINEVTGKTYGAMA
HHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCHH
WNYVGYWGGLVGQKPWASCGLATGNLTQGQYDKMTQAEMTQLSNQEALEASTCAKGYADH
HHHHHHHCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHH
TRNYVIYNAYLRYNYKDIFEIRGGRYESPADYMSGYNQGLDMTLNLGNFKFWWFSSFGRG
CCCEEEEEEEEEECCHHHEEECCCCCCCCHHHHHCCCCCCEEEEECCCEEEEEECCCCCC
FAYNEWLYNFYSPKTYTLKNGQTINPGVHAFYIIWNYKGWSIQPFVYFSPFNEYDPNFTI
CEEHHHHHHCCCCEEEEECCCCEECCCCEEEEEEEECCCCEEEEEEEECCCCCCCCCEEE
TYDSNPTFTGLGFRSQTDVTVLNPFYAKSFWDTYQFGMPAGKNAHSLMIKQKFEWNEYNF
EECCCCCEEECCCCCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCC
GFGIYKSFGNANWMIGYHGNRLGFDFWTNTVYANTLNSLSYMMDANAFTVFAFGGGVHRK
CCHHHHHCCCCEEEEEECCCEEEEEHHCCEEEEHHHHHHHHHCCCCEEEEEEECCCHHHH
LLWGLLGRLTYGPRANEQVLSLNLGYKFTKNFSADIKFEYYNVLMHQGYKMGWNGPKLDS
HHHHHHHHCCCCCCCCCEEEEEECCEEEECCCCCEEEEHHHHHHHHCCEEECCCCCCCCC
QPATDQDRSHIFTEIVWKL
CCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MNYKVASAKNIATLLFLFSSQSQAFDLGKIAKIKAGAESFSKVGFNNKPINTNKGLYPTE
CCEECCCCCCCEEEEEEECCCCCCCCCCCCEEECCCHHHHHHCCCCCCCCCCCCCCCCHH
TFMTIMAYMQVDFTELLPKSATANGHHLDGSLGGWGGAVIYDSTKDFINEVTGKTYGAMA
HHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCHH
WNYVGYWGGLVGQKPWASCGLATGNLTQGQYDKMTQAEMTQLSNQEALEASTCAKGYADH
HHHHHHHCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHH
TRNYVIYNAYLRYNYKDIFEIRGGRYESPADYMSGYNQGLDMTLNLGNFKFWWFSSFGRG
CCCEEEEEEEEEECCHHHEEECCCCCCCCHHHHHCCCCCCEEEEECCCEEEEEECCCCCC
FAYNEWLYNFYSPKTYTLKNGQTINPGVHAFYIIWNYKGWSIQPFVYFSPFNEYDPNFTI
CEEHHHHHHCCCCEEEEECCCCEECCCCEEEEEEEECCCCEEEEEEEECCCCCCCCCEEE
TYDSNPTFTGLGFRSQTDVTVLNPFYAKSFWDTYQFGMPAGKNAHSLMIKQKFEWNEYNF
EECCCCCEEECCCCCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCC
GFGIYKSFGNANWMIGYHGNRLGFDFWTNTVYANTLNSLSYMMDANAFTVFAFGGGVHRK
CCHHHHHCCCCEEEEEECCCEEEEEHHCCEEEEHHHHHHHHHCCCCEEEEEEECCCHHHH
LLWGLLGRLTYGPRANEQVLSLNLGYKFTKNFSADIKFEYYNVLMHQGYKMGWNGPKLDS
HHHHHHHHCCCCCCCCCEEEEEECCEEEECCCCCEEEEHHHHHHHHCCEEECCCCCCCCC
QPATDQDRSHIFTEIVWKL
CCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA