Click here to switch to the map view.

The map label for this gene is 108562890

Identifier: 108562890

GI number: 108562890

Start: 481409

End: 482335

Strand: Direct

Name: 108562890

Synonym: HPAG1_0465

Alternate gene names: NA

Gene position: 481409-482335 (Clockwise)

Preceding gene: 108562889

Following gene: 108562894

Centisome position: 30.16

GC content: 36.89

Gene sequence:

>927_bases
ATGATAAACTACCCTAATTTGCCTAATAGCACACTAGAGATCACCGAACAGCCACAGGTAAAAGAAATCACTAACGAACT
CTTAAAGCAATTACAAAACGCTTTAAATTCTAATAGCCTTTTTACTGAGCAAGTGGAACTAAGCCTTAAAGGCATTGTTA
GGATTTTAGAAGTGCTTTTGAGTTTGGATTTTTTCAAAAACGCCAACGAGATCGATAGCAGTTTAAGAAATTCTATTGAG
TGGCTTAGTAACGCCGGCGAGAGCTTAAAAGCGAAAATGAAAGAATACGAGGGCTTTTTTAGCGATTTCAATACGAGCAT
GCATGCTAATGAGCAAGAAGTAACGAACACTTTAAACGCTAACACCGAAAACATCAAAAGCGAAATTAAAAAGCTAGAAA
ATCAATTGATAGAAACCACTACAAAGCTTTTAACGAGCTATCAAATCTTTTTAAACCAAGCACGAGAAAACGCTAATCAT
CAAATCACAGAAAACAAAATCCAAAGCCTTGAAGCGATTACACAAGCCAAAACGACCGCTAACAATGAAATAAGCGAGAA
TAAAACGCAAGCGATAACTAACATTAACCAAGCGAAAGAAAACGCTAACAATGAAATAAGCGCCAACCAAACCCAAGCGA
TAACTAACATTAACGAAGCGAAAGAAAACGCTACAACGCAAATAAACACCAATAAGCAAGAAGTTTTAAACAACATCACG
CAACAAAAGCAACAAGCCACAAGCGAGATTAACGAAGCGAAAAAAACCGCATTTAACGAACTTTTAGAAACCTTGAAGCC
GAAGTTTAGCGGCTTGTTTGCGGGCGTTTATTATATTCATAATGTGATCTATATTCAAGGCGGATGGGAGCAAAAAATAA
AAGACTTAAGCGATTATGCGCTAGAGAAAAGCAAGAAAGGAGAGTAA

Upstream 100 bases:

>100_bases
ATTGAGTCGCCTTTAGCACCAAATTACAAGGGGAAAGATACTAATCCCCTAAACCTTGATAATCCTAATCCTACCACAAA
AAAATTAAATAAGGAATAAA

Downstream 100 bases:

>100_bases
AATTTTAAATTGAGAAATTGATGAAGATTTATTTTGCACGGAATTTAGGGCAACGCTTCAAAAACGCAATGATTAGGAAA
CCAACCACAAGACAAATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MINYPNLPNSTLEITEQPQVKEITNELLKQLQNALNSNSLFTEQVELSLKGIVRILEVLLSLDFFKNANEIDSSLRNSIE
WLSNAGESLKAKMKEYEGFFSDFNTSMHANEQEVTNTLNANTENIKSEIKKLENQLIETTTKLLTSYQIFLNQARENANH
QITENKIQSLEAITQAKTTANNEISENKTQAITNINQAKENANNEISANQTQAITNINEAKENATTQINTNKQEVLNNIT
QQKQQATSEINEAKKTAFNELLETLKPKFSGLFAGVYYIHNVIYIQGGWEQKIKDLSDYALEKSKKGE

Sequences:

>Translated_308_residues
MINYPNLPNSTLEITEQPQVKEITNELLKQLQNALNSNSLFTEQVELSLKGIVRILEVLLSLDFFKNANEIDSSLRNSIE
WLSNAGESLKAKMKEYEGFFSDFNTSMHANEQEVTNTLNANTENIKSEIKKLENQLIETTTKLLTSYQIFLNQARENANH
QITENKIQSLEAITQAKTTANNEISENKTQAITNINQAKENANNEISANQTQAITNINEAKENATTQINTNKQEVLNNIT
QQKQQATSEINEAKKTAFNELLETLKPKFSGLFAGVYYIHNVIYIQGGWEQKIKDLSDYALEKSKKGE
>Mature_308_residues
MINYPNLPNSTLEITEQPQVKEITNELLKQLQNALNSNSLFTEQVELSLKGIVRILEVLLSLDFFKNANEIDSSLRNSIE
WLSNAGESLKAKMKEYEGFFSDFNTSMHANEQEVTNTLNANTENIKSEIKKLENQLIETTTKLLTSYQIFLNQARENANH
QITENKIQSLEAITQAKTTANNEISENKTQAITNINQAKENANNEISANQTQAITNINEAKENATTQINTNKQEVLNNIT
QQKQQATSEINEAKKTAFNELLETLKPKFSGLFAGVYYIHNVIYIQGGWEQKIKDLSDYALEKSKKGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34868; Mature: 34868

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINYPNLPNSTLEITEQPQVKEITNELLKQLQNALNSNSLFTEQVELSLKGIVRILEVLL
CCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
SLDFFKNANEIDSSLRNSIEWLSNAGESLKAKMKEYEGFFSDFNTSMHANEQEVTNTLNA
HHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
NTENIKSEIKKLENQLIETTTKLLTSYQIFLNQARENANHQITENKIQSLEAITQAKTTA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
NNEISENKTQAITNINQAKENANNEISANQTQAITNINEAKENATTQINTNKQEVLNNIT
CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
QQKQQATSEINEAKKTAFNELLETLKPKFSGLFAGVYYIHNVIYIQGGWEQKIKDLSDYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHH
LEKSKKGE
HHHCCCCC
>Mature Secondary Structure
MINYPNLPNSTLEITEQPQVKEITNELLKQLQNALNSNSLFTEQVELSLKGIVRILEVLL
CCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
SLDFFKNANEIDSSLRNSIEWLSNAGESLKAKMKEYEGFFSDFNTSMHANEQEVTNTLNA
HHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
NTENIKSEIKKLENQLIETTTKLLTSYQIFLNQARENANHQITENKIQSLEAITQAKTTA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
NNEISENKTQAITNINQAKENANNEISANQTQAITNINEAKENATTQINTNKQEVLNNIT
CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
QQKQQATSEINEAKKTAFNELLETLKPKFSGLFAGVYYIHNVIYIQGGWEQKIKDLSDYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHH
LEKSKKGE
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA