Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
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Accession | NC_008086 |
Length | 1,596,366 |
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The map label for this gene is minC [H]
Identifier: 108562819
GI number: 108562819
Start: 403431
End: 404084
Strand: Direct
Name: minC [H]
Synonym: HPAG1_0394
Alternate gene names: 108562819
Gene position: 403431-404084 (Clockwise)
Preceding gene: 108562818
Following gene: 108562820
Centisome position: 25.27
GC content: 35.17
Gene sequence:
>654_bases ATGGATAAAAACCAATATCATCACCCCCATAGAGCAAGCCAAACAGCTTTTAATGAAAGGATAGTCATGTTAAAAACCAA TCAAAAAAACGTGCATGCGTTTGAAATTGAAAAGCAAGAGCCTGAGGCGGTCATGGAATTTTTAGAAAAAAACCATGCCC TTTTGCAATATTTTCTCATTATATTTAAATACGATATTGAATCAGAAGTCAAAGCCGTTTTGCATAAACACCAACTTTTG TTTTTAGAAACGAATCGCGTTTTAAACGGACGCCATATCAAAACCATGCCTTTAAAAGAAGAAACCGATCATCCAAAACC CAATCATTCTAAAACAGAACCCAAGACAACGATTTATGAGCGCCATATCAGGAGTGGGGAAGAGATTTATAGCGCTAATC ACCTTATTTTTTTGGGTAATATCCACAATGGAGCGAAGATTATTTCAGAAGGCTGTGTGTCGGTTTATGGGGTTTGCGAA GGGGCGATTGTGTGCTTTGGAGAGTGCTTGATTTTAAAAGAAGTCAAGAGCGCTCAAATCGTTTTTCAAAATAAAATTTT ATCTCTAAAAGAGGTTGAACGGCTTTTGGTAAATAAAAATATTAAAATAATCACTAAAAATGACGATATACTAGACATAA AGGAAGTATTATGA
Upstream 100 bases:
>100_bases AAAGCGTGGGGAGTAGTGGTTTGAAATTAGGGAGCGGGTTGCATTTAGGGATGCTTTTGCAAGGGGTTTTTGTCCGGCCC AATGAATGGCTTAATGAGCA
Downstream 100 bases:
>100_bases AACAAACAACCATTAACCACTCTGTGGAATTAGTAGGGATAGGCTTGCACAAGGGCGTTCCTGTGAAGCTTGTTTTAGAG CCTTTAGGAGAAAATCAAGG
Product: septum formation inhibitor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MDKNQYHHPHRASQTAFNERIVMLKTNQKNVHAFEIEKQEPEAVMEFLEKNHALLQYFLIIFKYDIESEVKAVLHKHQLL FLETNRVLNGRHIKTMPLKEETDHPKPNHSKTEPKTTIYERHIRSGEEIYSANHLIFLGNIHNGAKIISEGCVSVYGVCE GAIVCFGECLILKEVKSAQIVFQNKILSLKEVERLLVNKNIKIITKNDDILDIKEVL
Sequences:
>Translated_217_residues MDKNQYHHPHRASQTAFNERIVMLKTNQKNVHAFEIEKQEPEAVMEFLEKNHALLQYFLIIFKYDIESEVKAVLHKHQLL FLETNRVLNGRHIKTMPLKEETDHPKPNHSKTEPKTTIYERHIRSGEEIYSANHLIFLGNIHNGAKIISEGCVSVYGVCE GAIVCFGECLILKEVKSAQIVFQNKILSLKEVERLLVNKNIKIITKNDDILDIKEVL >Mature_217_residues MDKNQYHHPHRASQTAFNERIVMLKTNQKNVHAFEIEKQEPEAVMEFLEKNHALLQYFLIIFKYDIESEVKAVLHKHQLL FLETNRVLNGRHIKTMPLKEETDHPKPNHSKTEPKTTIYERHIRSGEEIYSANHLIFLGNIHNGAKIISEGCVSVYGVCE GAIVCFGECLILKEVKSAQIVFQNKILSLKEVERLLVNKNIKIITKNDDILDIKEVL
Specific function: Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize ftsZ filaments that have formed before they mature into polar Z rings. Prevents ftsZ polymerization [H]
COG id: COG0850
COG function: function code D; Septum formation inhibitor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the minC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016098 - InterPro: IPR013033 - InterPro: IPR005526 [H]
Pfam domain/function: PF03775 MinC_C [H]
EC number: NA
Molecular weight: Translated: 25149; Mature: 25149
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKNQYHHPHRASQTAFNERIVMLKTNQKNVHAFEIEKQEPEAVMEFLEKNHALLQYFLI CCCCCCCCCCCHHHHHHHCEEEEEEECCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHH IFKYDIESEVKAVLHKHQLLFLETNRVLNGRHIKTMPLKEETDHPKPNHSKTEPKTTIYE HHHCCCHHHHHHHHHHHEEEEEECCCEECCCEEEECCCCCCCCCCCCCCCCCCCHHHHHH RHIRSGEEIYSANHLIFLGNIHNGAKIISEGCVSVYGVCEGAIVCFGECLILKEVKSAQI HHHCCCHHEECCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHE VFQNKILSLKEVERLLVNKNIKIITKNDDILDIKEVL EHHHHCCCHHHHHHHHHCCCEEEEECCCCEEHHHHHC >Mature Secondary Structure MDKNQYHHPHRASQTAFNERIVMLKTNQKNVHAFEIEKQEPEAVMEFLEKNHALLQYFLI CCCCCCCCCCCHHHHHHHCEEEEEEECCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHH IFKYDIESEVKAVLHKHQLLFLETNRVLNGRHIKTMPLKEETDHPKPNHSKTEPKTTIYE HHHCCCHHHHHHHHHHHEEEEEECCCEECCCEEEECCCCCCCCCCCCCCCCCCCHHHHHH RHIRSGEEIYSANHLIFLGNIHNGAKIISEGCVSVYGVCEGAIVCFGECLILKEVKSAQI HHHCCCHHEECCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHE VFQNKILSLKEVERLLVNKNIKIITKNDDILDIKEVL EHHHHCCCHHHHHHHHHCCCEEEEECCCCEEHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA