Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
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Accession | NC_008086 |
Length | 1,596,366 |
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The map label for this gene is ddg [C]
Identifier: 108562707
GI number: 108562707
Start: 285266
End: 286252
Strand: Direct
Name: ddg [C]
Synonym: HPAG1_0282
Alternate gene names: 108562707
Gene position: 285266-286252 (Clockwise)
Preceding gene: 108562706
Following gene: 108562709
Centisome position: 17.87
GC content: 39.82
Gene sequence:
>987_bases ATGACTTATAAAGAACGACTCATACACGAAAAGATATTGAACCAAAACGACAAGGGTTTGAAAACGGAATTACGCATTTT GAGTATTTTTATCGTGGAATCTTTAGTGAATATTCTGGGGTTTATGTTGGCTAAAATGCCCCATTTTTGGTTTTTAAGGT GCATTAAAGCTGTGGCGTGGCTGATGAGAACCTTTGATAGACGCCGTTATTTTGACGCTAAAGCCAATTTGGATTTTGTG TTTGGGGATTCTAAAAGCGAAGAAGAGAAAAAAAGGATCATTAAAAAGGGGTATGAAAATTTTGCTTTCATCATTTTAGA AACCATTAGAGTGATCTTTATCCCTAAAGATGAATACGACGCTCGTTTCACGCTCATCAATGAAGAAAACGTGTGGAAAT CTTTAAACAAGGAAGGCCAAGCGATCATTTTATGCATGCATTTTGGCTATTGGGAAGCGGTAGGCACGACTTTAGCGCAA TATTATAAGGATTATGGTAGGGGGTGTTTGGGGCGTTTGACTAAATTCGCCCCTATCAACCACATGATTATGAGCAGGCG AGAGGCGTTTGGGGTGCGTTTTGTCAATAAAGTGGGAGCGATGAAAGAACTCATTAAGATGTATAATCAAGGCAATGGCC TTGTGGGGATTTTAGTGGATCAAAATGTCGTGCCTAAAGATGGGGTGGTGGTGAAATTTTTCAATAAAGACGCTACGCAT ACCACGATCGCTTCTATTTTATCGCGCCGTTACAATATAGACATCCAGCCGGTATTCATTGATTTTAATGACGATTATTC GCATTATACAGCGACTTATTACCCGAGTATCCGCTCTAAAATCACCGATAACGCTGAAAACGATATTTTAGAATGCACGC AAGCCCAAGCGAGTTTGTGCGAAGAAGTGATTAGAAACCACCCGGAAAGTTATTTTTGGTTCCACAGGCGTTTTAAAAGC ACCCACCCTGAAATTTATCAAAGATAG
Upstream 100 bases:
>100_bases GTAATTCAAACGCCAGCTACCATAAAAAGGATTTTTCTATCCAAAATATAGAGCCTAAAAAAATTAAAGAATGCGTTTTA AACATTTTAAAGGAAAAAGA
Downstream 100 bases:
>100_bases GGTTTTGTTTTAATGAAAAATTAAAAACTAAAGCCTTATTTGAAGAAAACTTTTATTGATGGTGAAAAACGCTTTTTAGT ATTTTTGCTTTCCATCATTC
Product: lipid A biosynthesis lauroyl acyltransferase
Products: NA
Alternate protein names: Lipid A Biosynthesis Lauroyl Acyltransferase; Lipid A Biosynthesis Lauroyl/Myristoyl Acyltransferase; Acyltransferase
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MTYKERLIHEKILNQNDKGLKTELRILSIFIVESLVNILGFMLAKMPHFWFLRCIKAVAWLMRTFDRRRYFDAKANLDFV FGDSKSEEEKKRIIKKGYENFAFIILETIRVIFIPKDEYDARFTLINEENVWKSLNKEGQAIILCMHFGYWEAVGTTLAQ YYKDYGRGCLGRLTKFAPINHMIMSRREAFGVRFVNKVGAMKELIKMYNQGNGLVGILVDQNVVPKDGVVVKFFNKDATH TTIASILSRRYNIDIQPVFIDFNDDYSHYTATYYPSIRSKITDNAENDILECTQAQASLCEEVIRNHPESYFWFHRRFKS THPEIYQR
Sequences:
>Translated_328_residues MTYKERLIHEKILNQNDKGLKTELRILSIFIVESLVNILGFMLAKMPHFWFLRCIKAVAWLMRTFDRRRYFDAKANLDFV FGDSKSEEEKKRIIKKGYENFAFIILETIRVIFIPKDEYDARFTLINEENVWKSLNKEGQAIILCMHFGYWEAVGTTLAQ YYKDYGRGCLGRLTKFAPINHMIMSRREAFGVRFVNKVGAMKELIKMYNQGNGLVGILVDQNVVPKDGVVVKFFNKDATH TTIASILSRRYNIDIQPVFIDFNDDYSHYTATYYPSIRSKITDNAENDILECTQAQASLCEEVIRNHPESYFWFHRRFKS THPEIYQR >Mature_327_residues TYKERLIHEKILNQNDKGLKTELRILSIFIVESLVNILGFMLAKMPHFWFLRCIKAVAWLMRTFDRRRYFDAKANLDFVF GDSKSEEEKKRIIKKGYENFAFIILETIRVIFIPKDEYDARFTLINEENVWKSLNKEGQAIILCMHFGYWEAVGTTLAQY YKDYGRGCLGRLTKFAPINHMIMSRREAFGVRFVNKVGAMKELIKMYNQGNGLVGILVDQNVVPKDGVVVKFFNKDATHT TIASILSRRYNIDIQPVFIDFNDDYSHYTATYYPSIRSKITDNAENDILECTQAQASLCEEVIRNHPESYFWFHRRFKST HPEIYQR
Specific function: Unknown
COG id: COG1560
COG function: function code M; Lauroyl/myristoyl acyltransferase
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082094, Length=272, Percent_Identity=24.2647058823529, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.-
Molecular weight: Translated: 38619; Mature: 38488
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYKERLIHEKILNQNDKGLKTELRILSIFIVESLVNILGFMLAKMPHFWFLRCIKAVAW CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LMRTFDRRRYFDAKANLDFVFGDSKSEEEKKRIIKKGYENFAFIILETIRVIFIPKDEYD HHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCHHHHHHHHHHHHHEEEEECCCCC ARFTLINEENVWKSLNKEGQAIILCMHFGYWEAVGTTLAQYYKDYGRGCLGRLTKFAPIN CEEEEECCHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHH HMIMSRREAFGVRFVNKVGAMKELIKMYNQGNGLVGILVDQNVVPKDGVVVKFFNKDATH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEECCCCHH TTIASILSRRYNIDIQPVFIDFNDDYSHYTATYYPSIRSKITDNAENDILECTQAQASLC HHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHH EEVIRNHPESYFWFHRRFKSTHPEIYQR HHHHHCCCHHHHHHHHHHCCCCHHHHCC >Mature Secondary Structure TYKERLIHEKILNQNDKGLKTELRILSIFIVESLVNILGFMLAKMPHFWFLRCIKAVAW CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LMRTFDRRRYFDAKANLDFVFGDSKSEEEKKRIIKKGYENFAFIILETIRVIFIPKDEYD HHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCHHHHHHHHHHHHHEEEEECCCCC ARFTLINEENVWKSLNKEGQAIILCMHFGYWEAVGTTLAQYYKDYGRGCLGRLTKFAPIN CEEEEECCHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHH HMIMSRREAFGVRFVNKVGAMKELIKMYNQGNGLVGILVDQNVVPKDGVVVKFFNKDATH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEECCCCHH TTIASILSRRYNIDIQPVFIDFNDDYSHYTATYYPSIRSKITDNAENDILECTQAQASLC HHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHH EEVIRNHPESYFWFHRRFKSTHPEIYQR HHHHHCCCHHHHHHHHHHCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA