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The map label for this gene is fdx [H]

Identifier: 108562704

GI number: 108562704

Start: 282535

End: 282786

Strand: Direct

Name: fdx [H]

Synonym: HPAG1_0279

Alternate gene names: 108562704

Gene position: 282535-282786 (Clockwise)

Preceding gene: 108562703

Following gene: 108562705

Centisome position: 17.7

GC content: 42.06

Gene sequence:

>252_bases
ATGTCATTATTGGTGAATGATGAATGCATTGCATGCGATGCTTGCAGAGAAGAATGCCCTAGTGAGGCGATTGAAGAGGG
CGATCCCATTTATAATATTGATCCAGACAGATGCACAGAGTGTTACGGGTATGATGATGAACCTCGTTGCGTGAGCGTAT
GCCCTGTAGATGCGATTTTACCGGATCCTAACAATGCAGAGAGCAAAGAGGAATTGAAATACAAATACGAAAGCTTAAAA
GAGCAAGATTAA

Upstream 100 bases:

>100_bases
CCCCATTCTCAAAATCAAAAAAAAAAATAGTCTTTTTAGATTGAATTTTAAGCTAATTTAGAGTAAAAATCGTATTCAAA
CTTTTTAAAAGGAGTTAGTC

Downstream 100 bases:

>100_bases
AGGCTAGCAATGGCTAAAATCACAACCGTGATTGATATAGGCTCTAATTCAGTGCGTTTGGCTATCTTTAAAAAGACGAG
TCAGTTTGGGTTTTACTTGC

Product: ferrodoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 82

Protein sequence:

>83_residues
MSLLVNDECIACDACREECPSEAIEEGDPIYNIDPDRCTECYGYDDEPRCVSVCPVDAILPDPNNAESKEELKYKYESLK
EQD

Sequences:

>Translated_83_residues
MSLLVNDECIACDACREECPSEAIEEGDPIYNIDPDRCTECYGYDDEPRCVSVCPVDAILPDPNNAESKEELKYKYESLK
EQD
>Mature_82_residues
SLLVNDECIACDACREECPSEAIEEGDPIYNIDPDRCTECYGYDDEPRCVSVCPVDAILPDPNNAESKEELKYKYESLKE
QD

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788914, Length=84, Percent_Identity=45.2380952380952, Blast_Score=80, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9399; Mature: 9268

Theoretical pI: Translated: 3.69; Mature: 3.69

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
10.8 %Cys+Met (Translated Protein)
9.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
9.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLVNDECIACDACREECPSEAIEEGDPIYNIDPDRCTECYGYDDEPRCVSVCPVDAIL
CCEECCCCEEECHHHHHCCCHHHHHCCCCCEECCHHHHHHHCCCCCCCCEEEECCCCCCC
PDPNNAESKEELKYKYESLKEQD
CCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SLLVNDECIACDACREECPSEAIEEGDPIYNIDPDRCTECYGYDDEPRCVSVCPVDAIL
CEECCCCEEECHHHHHCCCHHHHHCCCCCEECCHHHHHHHCCCCCCCCEEEECCCCCCC
PDPNNAESKEELKYKYESLKEQD
CCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8765743; 893371; 8880900 [H]