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The map label for this gene is trpC [H]

Identifier: 108562703

GI number: 108562703

Start: 281919

End: 282464

Strand: Direct

Name: trpC [H]

Synonym: HPAG1_0278

Alternate gene names: 108562703

Gene position: 281919-282464 (Clockwise)

Preceding gene: 108562702

Following gene: 108562704

Centisome position: 17.66

GC content: 38.1

Gene sequence:

>546_bases
ATGCAAGAAATAGGGATTTTAGAAAATTTACAAAAAAGCTTAGCCTTAAAAGAGGGCATGCTTTCTTATGAAATGTTAGG
TAAAAGCCTGTCGTATAACCCTTACTTGCCTAGAGTCATTCCTCAAACTAAAGATTGTGTTTTTGTAACCCCTGATGAGG
TTTTAGAAAAGCTTTTGAAAGAAAACACCCACACCGATTGCGTTATTGTCAATTTCAAAGGATTATACGAAATAGGCGCG
CCAAGCGTGTTTGATTTAGAAGTTTTAGGGTTATTGCGTCGCCATGCGAGTTCTTTGATTGTCCATCAAGATCTTTTCAT
CAGCCATTACCAGCTTTTAGAATCGCTTGTTCAAGGCTCTGATGGGGTCATTTTAGACGAAGAGCTTTTGAAAGAAGATT
TAAAGGGCATGGTAGAATTTGCTTGGCGTTTGGGCTTAGGCGTGTTTGTAGAAACCCACAAACAAGACTACACCCATTTA
AAAGATTTAGGGGTTTTAGGCGTGCTAGAAAAAGTCCCCCATTCTCAAAATCAAAAAAAAAAATAG

Upstream 100 bases:

>100_bases
TGGGGAATTGTTTGGAGGCTAAAAAAATTTTTTCTAGCATCGCTAAAGAGTCTATCCAAGCCGAACCCGAATTAAAAGAG
CACAATAAGATCATTCAAGA

Downstream 100 bases:

>100_bases
TCTTTTTAGATTGAATTTTAAGCTAATTTAGAGTAAAAATCGTATTCAAACTTTTTAAAAGGAGTTAGTCATGTCATTAT
TGGTGAATGATGAATGCATT

Product: hypothetical protein

Products: NA

Alternate protein names: IGPS [H]

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MQEIGILENLQKSLALKEGMLSYEMLGKSLSYNPYLPRVIPQTKDCVFVTPDEVLEKLLKENTHTDCVIVNFKGLYEIGA
PSVFDLEVLGLLRRHASSLIVHQDLFISHYQLLESLVQGSDGVILDEELLKEDLKGMVEFAWRLGLGVFVETHKQDYTHL
KDLGVLGVLEKVPHSQNQKKK

Sequences:

>Translated_181_residues
MQEIGILENLQKSLALKEGMLSYEMLGKSLSYNPYLPRVIPQTKDCVFVTPDEVLEKLLKENTHTDCVIVNFKGLYEIGA
PSVFDLEVLGLLRRHASSLIVHQDLFISHYQLLESLVQGSDGVILDEELLKEDLKGMVEFAWRLGLGVFVETHKQDYTHL
KDLGVLGVLEKVPHSQNQKKK
>Mature_181_residues
MQEIGILENLQKSLALKEGMLSYEMLGKSLSYNPYLPRVIPQTKDCVFVTPDEVLEKLLKENTHTDCVIVNFKGLYEIGA
PSVFDLEVLGLLRRHASSLIVHQDLFISHYQLLESLVQGSDGVILDEELLKEDLKGMVEFAWRLGLGVFVETHKQDYTHL
KDLGVLGVLEKVPHSQNQKKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR013798
- InterPro:   IPR001468
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00218 IGPS [H]

EC number: =4.1.1.48 [H]

Molecular weight: Translated: 20517; Mature: 20517

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEIGILENLQKSLALKEGMLSYEMLGKSLSYNPYLPRVIPQTKDCVFVTPDEVLEKLLK
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHH
ENTHTDCVIVNFKGLYEIGAPSVFDLEVLGLLRRHASSLIVHQDLFISHYQLLESLVQGS
CCCCCCEEEEECCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DGVILDEELLKEDLKGMVEFAWRLGLGVFVETHKQDYTHLKDLGVLGVLEKVPHSQNQKK
CCEEECHHHHHHHHHHHHHHHHHHCCHHEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCC
K
C
>Mature Secondary Structure
MQEIGILENLQKSLALKEGMLSYEMLGKSLSYNPYLPRVIPQTKDCVFVTPDEVLEKLLK
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHH
ENTHTDCVIVNFKGLYEIGAPSVFDLEVLGLLRRHASSLIVHQDLFISHYQLLESLVQGS
CCCCCCEEEEECCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DGVILDEELLKEDLKGMVEFAWRLGLGVFVETHKQDYTHLKDLGVLGVLEKVPHSQNQKK
CCEEECHHHHHHHHHHHHHHHHHHCCHHEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA