The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488309

Identifier: 103488309

GI number: 103488309

Start: 2987016

End: 2988125

Strand: Reverse

Name: 103488309

Synonym: Sala_2832

Alternate gene names: NA

Gene position: 2988125-2987016 (Counterclockwise)

Preceding gene: 103488310

Following gene: 103488308

Centisome position: 89.33

GC content: 63.33

Gene sequence:

>1110_bases
ATGACCATCACCATCAACGCCGCTTTCGACAGCGGCAACATCGTCGTGGACGCCATTGACGGCACATCCGCCCGCCTGTC
GATCCGCAAGGATCGCGAATCGGATTTTTTCCAGTGGTTCCACTTTCGCGTCGCCTGCACCGTCGGCGATGCGCTCGACC
TCGCGATTACCGGGCTCGATGCGTCGGCCTATCCCGACGGCTGGCTTGGCTATGCGGCGTGCGCCAGCTATGACCGCGAA
AGCTGGTTCCGCCTTGACACCACCTATGATGCGGGAACCTTGACGATCCGGCATACGGCCGAGGGTCCGCTCCTGTGGGT
CGCCTATTTCGCGCCCTATTCGATGGAACGGCACCATGACCTGATCGCGTCGGTCGCCGAATGCGAGGGCGTGACCTATC
GCTGCCTTGGCACCAGCCTCGAAGGCCAGCCGATCGACTGCCTCGAAATGGGCAGCGGCGATACGCAGGTGTGGCTCTAC
GCGCGCCAGCATCCGGGCGAGAGCATGGCCGAATGGTGGATGGAGGGCGCGCTCGAAATGCTCACCGACCCGGCCGACCC
GCACGCGCGTGCGCTCCGGCAGAAATGCCGTTTCCATATCGTGCCGAACATGAACCCCGACGGCTCGCGCCGCGGCCATC
TGCGCACCAACTATGCGGGCGTGAACCTCAACCGCGAATGGGACAATCCGACCGCCGAGCGCAGCCCCGAAGTGCTGTGC
GTTCGCAATGCGATGGACGAAAGCGGTGTCGACTGGGCGATCGACGTCCATGGTGATGAGGCGATTCCGGCGGTCTTTCT
CGCGGGATTCGAGGGCATTCCGTCGCTGAAACCCGACCAGATAGACAAGTTCAAGGCGTTCGAATCCGCGCTCGCCGCGA
ACACCCCCGATTTCCAGCTCGATCTCGGCTATGCCGAATCGGCGCCGGGGCAGGCGAATCTGTCGATGTCGACGACGCAG
CTCGCCGAACGCTTCGGTGCGGTGTCGATGACGCTCGAGATGCCGTTCAAGGACAATCGTGACCTGCCCGATCCCGTTCA
GGGCTGGTCGCCCGAACGGTCGAAGCGGCTGGCGCATGCCTGTCTTCAGACGCTGGACCATATTTTGTGA

Upstream 100 bases:

>100_bases
TCAAGGCGCCCGCCAACCAGCCGAGCCTTGCCGCGGCGAAACTGGCCGAAGCCCTATTCAAGGACTTCCCCGGCGAATCG
GGACGCACTATCAGCGTCCC

Downstream 100 bases:

>100_bases
GCGACGCCTGGCGGATCGTCGAGGATGATCTGTCGGGCGCGGGGATCCGCGCGCTGCTCGAGGCGCATTTTGCGGGGATG
CTCGCCCATTCGCCCGTGGG

Product: peptidase M14, carboxypeptidase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 368

Protein sequence:

>369_residues
MTITINAAFDSGNIVVDAIDGTSARLSIRKDRESDFFQWFHFRVACTVGDALDLAITGLDASAYPDGWLGYAACASYDRE
SWFRLDTTYDAGTLTIRHTAEGPLLWVAYFAPYSMERHHDLIASVAECEGVTYRCLGTSLEGQPIDCLEMGSGDTQVWLY
ARQHPGESMAEWWMEGALEMLTDPADPHARALRQKCRFHIVPNMNPDGSRRGHLRTNYAGVNLNREWDNPTAERSPEVLC
VRNAMDESGVDWAIDVHGDEAIPAVFLAGFEGIPSLKPDQIDKFKAFESALAANTPDFQLDLGYAESAPGQANLSMSTTQ
LAERFGAVSMTLEMPFKDNRDLPDPVQGWSPERSKRLAHACLQTLDHIL

Sequences:

>Translated_369_residues
MTITINAAFDSGNIVVDAIDGTSARLSIRKDRESDFFQWFHFRVACTVGDALDLAITGLDASAYPDGWLGYAACASYDRE
SWFRLDTTYDAGTLTIRHTAEGPLLWVAYFAPYSMERHHDLIASVAECEGVTYRCLGTSLEGQPIDCLEMGSGDTQVWLY
ARQHPGESMAEWWMEGALEMLTDPADPHARALRQKCRFHIVPNMNPDGSRRGHLRTNYAGVNLNREWDNPTAERSPEVLC
VRNAMDESGVDWAIDVHGDEAIPAVFLAGFEGIPSLKPDQIDKFKAFESALAANTPDFQLDLGYAESAPGQANLSMSTTQ
LAERFGAVSMTLEMPFKDNRDLPDPVQGWSPERSKRLAHACLQTLDHIL
>Mature_368_residues
TITINAAFDSGNIVVDAIDGTSARLSIRKDRESDFFQWFHFRVACTVGDALDLAITGLDASAYPDGWLGYAACASYDRES
WFRLDTTYDAGTLTIRHTAEGPLLWVAYFAPYSMERHHDLIASVAECEGVTYRCLGTSLEGQPIDCLEMGSGDTQVWLYA
RQHPGESMAEWWMEGALEMLTDPADPHARALRQKCRFHIVPNMNPDGSRRGHLRTNYAGVNLNREWDNPTAERSPEVLCV
RNAMDESGVDWAIDVHGDEAIPAVFLAGFEGIPSLKPDQIDKFKAFESALAANTPDFQLDLGYAESAPGQANLSMSTTQL
AERFGAVSMTLEMPFKDNRDLPDPVQGWSPERSKRLAHACLQTLDHIL

Specific function: Unknown

COG id: COG2866

COG function: function code E; Predicted carboxypeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI31657119, Length=307, Percent_Identity=26.7100977198697, Blast_Score=89, Evalue=9e-18,
Organism=Homo sapiens, GI120444924, Length=189, Percent_Identity=31.7460317460317, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI170763513, Length=285, Percent_Identity=26.3157894736842, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI222352158, Length=335, Percent_Identity=24.7761194029851, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI78482633, Length=87, Percent_Identity=40.2298850574713, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI118421091, Length=87, Percent_Identity=40.2298850574713, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI193202888, Length=330, Percent_Identity=24.5454545454545, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI115533904, Length=374, Percent_Identity=23.5294117647059, Blast_Score=78, Evalue=8e-15,
Organism=Drosophila melanogaster, GI24641847, Length=344, Percent_Identity=24.7093023255814, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI161077807, Length=344, Percent_Identity=24.7093023255814, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28571179, Length=344, Percent_Identity=24.7093023255814, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24641845, Length=344, Percent_Identity=24.7093023255814, Blast_Score=76, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000834 [H]

Pfam domain/function: PF00246 Peptidase_M14 [H]

EC number: NA

Molecular weight: Translated: 40956; Mature: 40825

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTITINAAFDSGNIVVDAIDGTSARLSIRKDRESDFFQWFHFRVACTVGDALDLAITGLD
CEEEEEEEECCCCEEEEEECCCCEEEEEECCCCHHHHHEEEEEEEEEECCCEEEEEECCC
ASAYPDGWLGYAACASYDRESWFRLDTTYDAGTLTIRHTAEGPLLWVAYFAPYSMERHHD
CCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCCCEEEEEEECCCCHHHHHH
LIASVAECEGVTYRCLGTSLEGQPIDCLEMGSGDTQVWLYARQHPGESMAEWWMEGALEM
HHHHHHHHCCCEEEEECCCCCCCCCCCEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHH
LTDPADPHARALRQKCRFHIVPNMNPDGSRRGHLRTNYAGVNLNREWDNPTAERSPEVLC
HCCCCCHHHHHHHHCCEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEE
VRNAMDESGVDWAIDVHGDEAIPAVFLAGFEGIPSLKPDQIDKFKAFESALAANTPDFQL
EECCCCCCCCEEEEEECCCCCCHHHHEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE
DLGYAESAPGQANLSMSTTQLAERFGAVSMTLEMPFKDNRDLPDPVQGWSPERSKRLAHA
ECCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHH
CLQTLDHIL
HHHHHHHCC
>Mature Secondary Structure 
TITINAAFDSGNIVVDAIDGTSARLSIRKDRESDFFQWFHFRVACTVGDALDLAITGLD
EEEEEEEECCCCEEEEEECCCCEEEEEECCCCHHHHHEEEEEEEEEECCCEEEEEECCC
ASAYPDGWLGYAACASYDRESWFRLDTTYDAGTLTIRHTAEGPLLWVAYFAPYSMERHHD
CCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCCCEEEEEEECCCCHHHHHH
LIASVAECEGVTYRCLGTSLEGQPIDCLEMGSGDTQVWLYARQHPGESMAEWWMEGALEM
HHHHHHHHCCCEEEEECCCCCCCCCCCEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHH
LTDPADPHARALRQKCRFHIVPNMNPDGSRRGHLRTNYAGVNLNREWDNPTAERSPEVLC
HCCCCCHHHHHHHHCCEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEE
VRNAMDESGVDWAIDVHGDEAIPAVFLAGFEGIPSLKPDQIDKFKAFESALAANTPDFQL
EECCCCCCCCEEEEEECCCCCCHHHHEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE
DLGYAESAPGQANLSMSTTQLAERFGAVSMTLEMPFKDNRDLPDPVQGWSPERSKRLAHA
ECCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHH
CLQTLDHIL
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8320209 [H]