The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488302

Identifier: 103488302

GI number: 103488302

Start: 2979464

End: 2980765

Strand: Reverse

Name: 103488302

Synonym: Sala_2825

Alternate gene names: NA

Gene position: 2980765-2979464 (Counterclockwise)

Preceding gene: 103488303

Following gene: 103488301

Centisome position: 89.11

GC content: 68.82

Gene sequence:

>1302_bases
ATGAAGCCTTTCCATCGCTTGTCGCTCGCGCTGGTCGGCGCGGCGCTCGCCACGCCGCTGGCCGCCCAGACGCCTGCGCG
CACGGTGATCCACGCCGGGCATCTGCTCGCCGAACCCGGCAAGCCCGCGCGCGGCGCGGCGACGATCATTGTCGAGGGGG
GCAAGATCGTCAGCATCGCCGACGGCCACCAACCTGCCGAGGCGGGCGCGACGCTGATCGACCTCAGCGACAAATATGTC
CTGCCGGGCCTGATCGACAGCCATGTCCATCTGACGAGCGACGCGGGCGGCCTCGCGGGCCAGCTGGAGGAAGTGACGCT
CAGCCCCGCCGCGCAGGCCTTCAACGCCGAGGTGAACGGGATGAAGACGCTGCGCGCGGGCTTCACGACGGTGCGCAACC
TCGGCGACGGCGACGGTGCGACGCTGGCGCTCCGCGACGCGATCCTTGCGGGCAAGGTGCAGGGGCCGCGCATCGTCGAT
GCCGGCGCCAGCATCTCGGGCAGCGCCGGGCATATGGACGGTTCCCTGGGCTATCGCGACGAGCTGCGGCCCTTCTTCGC
GGGGGCGGGCAATACCTGCAACGGCGCCGACGATTGCCGCCGCGCGGTGCGGCTCCAGATCGGGCGCGGCGCCGACGTGA
TCAAATTCGCGTCCACCGGCGGGGTCAACAGCCGGATCGGCGCGGGTCTCGGCAAGCAGATGTTCGACGACGAGGCGCAG
GCGATCGTCGATACCGCGCATCTGTTCGGGAAAAAGGTCGCGGTCCACGCGCATGGCGCCGACGGCATCCGCCTCGCGCT
CGCGGCGGGGGCCGATTCGATCGAACATGGCACGATCCTCGACGAGGCGACGATCGCCCAATGGGCGAAATCGAAAACCT
ATTATGTTCCGACGCTCTCGACCGTGAACGGGTACAAGGAACGGCTCGCCGCCAATCCGGACGCGTATGAACCCGACGTG
CTGGCGAAGATCCGGTGGCGCATCTCGATCACCGGCAAGAGCCTCGAGCAGCTCGTCCCGCGCGGGGTGAAGATCGCCTT
CGGCACCGACGCCGGCGTGTCGAAGCACGGCCGCAACGGCGACGAGTTCGAACTGATGGTCCAGCACGGCATGACGCCTC
TCGAGGCGCTGAAGGCGGCGACGGTGAACGCCGCCGATCTGCTCGGCCTCGCCGACCAGATCGGCAGCATCGCGCCGGGC
AAGAGCGCCGACATTATCGCGGTGGCCAGCGATCCGCTCGCCGACGTCCGCGTGCTCAAAAAGGTCGATTTCGTCATGGC
GCGGGGCAGGGTGGTCGACTGA

Upstream 100 bases:

>100_bases
CATATCGCCGCCATGCCCGACGACAAAGGCGCGGCGCTGCGCTTTACGATGGGCTTCTGATCGGCTTTAACCGCCTGCGT
GCAATAACAGGGGAAGCAGG

Downstream 100 bases:

>100_bases
ACCGCCACCCTTTGCGTCTCCCGCTTGCTTCAAGGAATGAACGATGATCCTTTCGCTCGCCGCCGCCGCGCTCGCCGCCG
CACAGGCCGCCGCGCCCCAG

Product: amidohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MKPFHRLSLALVGAALATPLAAQTPARTVIHAGHLLAEPGKPARGAATIIVEGGKIVSIADGHQPAEAGATLIDLSDKYV
LPGLIDSHVHLTSDAGGLAGQLEEVTLSPAAQAFNAEVNGMKTLRAGFTTVRNLGDGDGATLALRDAILAGKVQGPRIVD
AGASISGSAGHMDGSLGYRDELRPFFAGAGNTCNGADDCRRAVRLQIGRGADVIKFASTGGVNSRIGAGLGKQMFDDEAQ
AIVDTAHLFGKKVAVHAHGADGIRLALAAGADSIEHGTILDEATIAQWAKSKTYYVPTLSTVNGYKERLAANPDAYEPDV
LAKIRWRISITGKSLEQLVPRGVKIAFGTDAGVSKHGRNGDEFELMVQHGMTPLEALKAATVNAADLLGLADQIGSIAPG
KSADIIAVASDPLADVRVLKKVDFVMARGRVVD

Sequences:

>Translated_433_residues
MKPFHRLSLALVGAALATPLAAQTPARTVIHAGHLLAEPGKPARGAATIIVEGGKIVSIADGHQPAEAGATLIDLSDKYV
LPGLIDSHVHLTSDAGGLAGQLEEVTLSPAAQAFNAEVNGMKTLRAGFTTVRNLGDGDGATLALRDAILAGKVQGPRIVD
AGASISGSAGHMDGSLGYRDELRPFFAGAGNTCNGADDCRRAVRLQIGRGADVIKFASTGGVNSRIGAGLGKQMFDDEAQ
AIVDTAHLFGKKVAVHAHGADGIRLALAAGADSIEHGTILDEATIAQWAKSKTYYVPTLSTVNGYKERLAANPDAYEPDV
LAKIRWRISITGKSLEQLVPRGVKIAFGTDAGVSKHGRNGDEFELMVQHGMTPLEALKAATVNAADLLGLADQIGSIAPG
KSADIIAVASDPLADVRVLKKVDFVMARGRVVD
>Mature_433_residues
MKPFHRLSLALVGAALATPLAAQTPARTVIHAGHLLAEPGKPARGAATIIVEGGKIVSIADGHQPAEAGATLIDLSDKYV
LPGLIDSHVHLTSDAGGLAGQLEEVTLSPAAQAFNAEVNGMKTLRAGFTTVRNLGDGDGATLALRDAILAGKVQGPRIVD
AGASISGSAGHMDGSLGYRDELRPFFAGAGNTCNGADDCRRAVRLQIGRGADVIKFASTGGVNSRIGAGLGKQMFDDEAQ
AIVDTAHLFGKKVAVHAHGADGIRLALAAGADSIEHGTILDEATIAQWAKSKTYYVPTLSTVNGYKERLAANPDAYEPDV
LAKIRWRISITGKSLEQLVPRGVKIAFGTDAGVSKHGRNGDEFELMVQHGMTPLEALKAATVNAADLLGLADQIGSIAPG
KSADIIAVASDPLADVRVLKKVDFVMARGRVVD

Specific function: Unknown

COG id: COG1228

COG function: function code Q; Imidazolonepropionase and related amidohydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To S.coelicolor SCO1861 [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322248, Length=324, Percent_Identity=34.5679012345679, Blast_Score=150, Evalue=4e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006680 [H]

Pfam domain/function: PF01979 Amidohydro_1 [H]

EC number: NA

Molecular weight: Translated: 44795; Mature: 44795

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPFHRLSLALVGAALATPLAAQTPARTVIHAGHLLAEPGKPARGAATIIVEGGKIVSIA
CCCHHHHHHHHHHHHHHCCHHCCCCHHHHHHCCHHCCCCCCCCCCEEEEEEECCEEEEEE
DGHQPAEAGATLIDLSDKYVLPGLIDSHVHLTSDAGGLAGQLEEVTLSPAAQAFNAEVNG
CCCCCHHHCCEEEECCCCEECCCCCCCCEEEECCCCCCCCCHHHEECCHHHHHHCCCCCC
MKTLRAGFTTVRNLGDGDGATLALRDAILAGKVQGPRIVDAGASISGSAGHMDGSLGYRD
HHHHHHHHHHHHHCCCCCCCEEEEEHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCHH
ELRPFFAGAGNTCNGADDCRRAVRLQIGRGADVIKFASTGGVNSRIGAGLGKQMFDDEAQ
HCCHHHCCCCCCCCCHHHHHHHHEEEECCCCCEEEEECCCCCCCHHHCCCCHHHHHHHHH
AIVDTAHLFGKKVAVHAHGADGIRLALAAGADSIEHGTILDEATIAQWAKSKTYYVPTLS
HHHHHHHHHCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEECCHH
TVNGYKERLAANPDAYEPDVLAKIRWRISITGKSLEQLVPRGVKIAFGTDAGVSKHGRNG
HHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCHHHHHHCCCCEEEEECCCCCCCCCCCCC
DEFELMVQHGMTPLEALKAATVNAADLLGLADQIGSIAPGKSADIIAVASDPLADVRVLK
CHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHH
KVDFVMARGRVVD
HHHHHHHCCCCCC
>Mature Secondary Structure
MKPFHRLSLALVGAALATPLAAQTPARTVIHAGHLLAEPGKPARGAATIIVEGGKIVSIA
CCCHHHHHHHHHHHHHHCCHHCCCCHHHHHHCCHHCCCCCCCCCCEEEEEEECCEEEEEE
DGHQPAEAGATLIDLSDKYVLPGLIDSHVHLTSDAGGLAGQLEEVTLSPAAQAFNAEVNG
CCCCCHHHCCEEEECCCCEECCCCCCCCEEEECCCCCCCCCHHHEECCHHHHHHCCCCCC
MKTLRAGFTTVRNLGDGDGATLALRDAILAGKVQGPRIVDAGASISGSAGHMDGSLGYRD
HHHHHHHHHHHHHCCCCCCCEEEEEHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCHH
ELRPFFAGAGNTCNGADDCRRAVRLQIGRGADVIKFASTGGVNSRIGAGLGKQMFDDEAQ
HCCHHHCCCCCCCCCHHHHHHHHEEEECCCCCEEEEECCCCCCCHHHCCCCHHHHHHHHH
AIVDTAHLFGKKVAVHAHGADGIRLALAAGADSIEHGTILDEATIAQWAKSKTYYVPTLS
HHHHHHHHHCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEECCHH
TVNGYKERLAANPDAYEPDVLAKIRWRISITGKSLEQLVPRGVKIAFGTDAGVSKHGRNG
HHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCHHHHHHCCCCEEEEECCCCCCCCCCCCC
DEFELMVQHGMTPLEALKAATVNAADLLGLADQIGSIAPGKSADIIAVASDPLADVRVLK
CHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHH
KVDFVMARGRVVD
HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]