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The map label for this gene is yfhC [C]

Identifier: 103488226

GI number: 103488226

Start: 2899069

End: 2899536

Strand: Reverse

Name: yfhC [C]

Synonym: Sala_2749

Alternate gene names: 103488226

Gene position: 2899536-2899069 (Counterclockwise)

Preceding gene: 103488228

Following gene: 103488224

Centisome position: 86.68

GC content: 67.95

Gene sequence:

>468_bases
ATGGCGCCATTCCCGCTCCCCGAACCGATGCGCCGCGCGCTCGATCTCGCCCGCATTGCCGCCGACTGGGGCGAAGTGCC
CGTCGGCGCGGTGATCGTCAAGGATGGCGCCGTGATCGCCGAAGGTCACAACCGCCCGCGCGAATCGCACGATCCCACCG
CGCATGCCGAAATCGTCGCGATGCGCATGGCGGCGGCAAAGCTGGGCAATGAGCGGCTCGACGGCTGCGACCTCTATGTC
ACGCTCGAACCCTGCGCGATGTGCGCCGGCGCGATCGCGCACGCGCGCATCGCGCGGCTCTATTACGGTGCCGACGATCC
GAAAGGCGGGGCGGTTGTTCACGGCCCACGCCTGTTCGCGCAACCAACGGTGCATCATCGGCCGGAGATTTACGACGGGA
TCGGCGAAAGCGAAGCGGCGGGGCTGCTCCGCGCATTTTTCGCAGCACGCCGCTCTAACGGGTCCTGA

Upstream 100 bases:

>100_bases
CGCCGGTCGGCGCCAGAAGCGCCGCAGGGACCGGTTGGGCCGGGAAAGGCGCGCGCTTATCGGCTTGCAGGGGATTCGTC
AAGGGATTAGCGGGGAAACC

Downstream 100 bases:

>100_bases
TCCTAGCCGAGCATCTCCTCGACCCATTCGGGCACCAGCCAGGTCGCGGGGCCGTGGCGGGCTTCGTCGAACCAGTGGCT
GCCCTGGCTGGGCTCCATGT

Product: CMP/dCMP deaminase, zinc-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MAPFPLPEPMRRALDLARIAADWGEVPVGAVIVKDGAVIAEGHNRPRESHDPTAHAEIVAMRMAAAKLGNERLDGCDLYV
TLEPCAMCAGAIAHARIARLYYGADDPKGGAVVHGPRLFAQPTVHHRPEIYDGIGESEAAGLLRAFFAARRSNGS

Sequences:

>Translated_155_residues
MAPFPLPEPMRRALDLARIAADWGEVPVGAVIVKDGAVIAEGHNRPRESHDPTAHAEIVAMRMAAAKLGNERLDGCDLYV
TLEPCAMCAGAIAHARIARLYYGADDPKGGAVVHGPRLFAQPTVHHRPEIYDGIGESEAAGLLRAFFAARRSNGS
>Mature_154_residues
APFPLPEPMRRALDLARIAADWGEVPVGAVIVKDGAVIAEGHNRPRESHDPTAHAEIVAMRMAAAKLGNERLDGCDLYVT
LEPCAMCAGAIAHARIARLYYGADDPKGGAVVHGPRLFAQPTVHHRPEIYDGIGESEAAGLLRAFFAARRSNGS

Specific function: Mutation In This Protein Makes E.Coli Resistant To The Toxic Proteins Encoded By The Gef Gene Family. [C]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Homo sapiens, GI124107608, Length=152, Percent_Identity=28.2894736842105, Blast_Score=68, Evalue=4e-12,
Organism=Homo sapiens, GI19923945, Length=68, Percent_Identity=47.0588235294118, Blast_Score=65, Evalue=3e-11,
Organism=Escherichia coli, GI145693172, Length=149, Percent_Identity=51.006711409396, Blast_Score=137, Evalue=4e-34,
Organism=Caenorhabditis elegans, GI17554608, Length=113, Percent_Identity=41.5929203539823, Blast_Score=89, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17541138, Length=145, Percent_Identity=35.1724137931034, Blast_Score=87, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17555996, Length=79, Percent_Identity=45.5696202531646, Blast_Score=69, Evalue=8e-13,
Organism=Saccharomyces cerevisiae, GI6322425, Length=152, Percent_Identity=33.5526315789474, Blast_Score=66, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21355527, Length=145, Percent_Identity=35.1724137931034, Blast_Score=72, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 16544; Mature: 16413

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPFPLPEPMRRALDLARIAADWGEVPVGAVIVKDGAVIAEGHNRPRESHDPTAHAEIVA
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEECCCCCCCCCCCCCHHHHHHH
MRMAAAKLGNERLDGCDLYVTLEPCAMCAGAIAHARIARLYYGADDPKGGAVVHGPRLFA
HHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEC
QPTVHHRPEIYDGIGESEAAGLLRAFFAARRSNGS
CCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
APFPLPEPMRRALDLARIAADWGEVPVGAVIVKDGAVIAEGHNRPRESHDPTAHAEIVA
CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEECCCCCCCCCCCCCHHHHHHH
MRMAAAKLGNERLDGCDLYVTLEPCAMCAGAIAHARIARLYYGADDPKGGAVVHGPRLFA
HHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEC
QPTVHHRPEIYDGIGESEAAGLLRAFFAARRSNGS
CCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA