Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is merT [H]
Identifier: 103488162
GI number: 103488162
Start: 2829586
End: 2829984
Strand: Reverse
Name: merT [H]
Synonym: Sala_2685
Alternate gene names: 103488162
Gene position: 2829984-2829586 (Counterclockwise)
Preceding gene: 103488164
Following gene: 103488161
Centisome position: 84.6
GC content: 61.65
Gene sequence:
>399_bases ATGAGCAATTCGAACATCGAGGCTGTGGCGCCGCGCGCATCTCAACAGCCCGAGGACAGAAGGAAGACCTGGTTTGCTGC GGGCGGTGCGATCGGAGCGGTGCTGGCCTCCACCTGCTGTATCGTGCCGCTGCTCCTGTTGACGCTCGGCGTCTCCGGCG CCTGGATCGGCAATCTCACCCTGCTCGAACCCTATAGGCCGATCTCCGCCGGCATCGCGCTTGTCTTCATCGCTCTGGGT TTCCGGCAAGTCTATCTCAAGGCCCGGCCAGCCTGTGAGGAAGGGTCCTACTGCGCTCGTCCGCAATCGTCCGTCATCAC CAAAACGATCCTCTGGCTTTCGACCGTGCTGGTCCTCCTCGCACTGACGATCGACTGGTGGGCACCCTATTTCTACTAG
Upstream 100 bases:
>100_bases CTTCCGAAAGGCGATGGTTTTGCATCCGAAAATAGCCCTTGAGTCTGTAGCTGCTACAGACCTTACACAGTGACCATATA AAGATCGAGAGACGATTCGC
Downstream 100 bases:
>100_bases GAGAAAGCAGCATGAAACGACTTGCAATCGTTGCGGGCGGCGCGCTTGCCATCGCGACTGCGGCCATCCCCTTGACCGCT TCCGTCGCGCAACCGTCCTC
Product: mercuric transporter MerT
Products: NA
Alternate protein names: Mercury ion transport protein [H]
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MSNSNIEAVAPRASQQPEDRRKTWFAAGGAIGAVLASTCCIVPLLLLTLGVSGAWIGNLTLLEPYRPISAGIALVFIALG FRQVYLKARPACEEGSYCARPQSSVITKTILWLSTVLVLLALTIDWWAPYFY
Sequences:
>Translated_132_residues MSNSNIEAVAPRASQQPEDRRKTWFAAGGAIGAVLASTCCIVPLLLLTLGVSGAWIGNLTLLEPYRPISAGIALVFIALG FRQVYLKARPACEEGSYCARPQSSVITKTILWLSTVLVLLALTIDWWAPYFY >Mature_131_residues SNSNIEAVAPRASQQPEDRRKTWFAAGGAIGAVLASTCCIVPLLLLTLGVSGAWIGNLTLLEPYRPISAGIALVFIALGF RQVYLKARPACEEGSYCARPQSSVITKTILWLSTVLVLLALTIDWWAPYFY
Specific function: Involved in mercuric transport. Passes a mercury ion from the periplasmic merP protein to the mercuric reductase (merA) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003457 [H]
Pfam domain/function: PF02411 MerT [H]
EC number: NA
Molecular weight: Translated: 14345; Mature: 14214
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSNIEAVAPRASQQPEDRRKTWFAAGGAIGAVLASTCCIVPLLLLTLGVSGAWIGNLT CCCCCCCEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCEE LLEPYRPISAGIALVFIALGFRQVYLKARPACEEGSYCARPQSSVITKTILWLSTVLVLL EECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH ALTIDWWAPYFY HHHHHHHCCCCC >Mature Secondary Structure SNSNIEAVAPRASQQPEDRRKTWFAAGGAIGAVLASTCCIVPLLLLTLGVSGAWIGNLT CCCCCCEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCEE LLEPYRPISAGIALVFIALGFRQVYLKARPACEEGSYCARPQSSVITKTILWLSTVLVLL EECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH ALTIDWWAPYFY HHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9159519 [H]