Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is merP [H]

Identifier: 103488161

GI number: 103488161

Start: 2829245

End: 2829574

Strand: Reverse

Name: merP [H]

Synonym: Sala_2684

Alternate gene names: 103488161

Gene position: 2829574-2829245 (Counterclockwise)

Preceding gene: 103488162

Following gene: 103488160

Centisome position: 84.59

GC content: 62.12

Gene sequence:

>330_bases
ATGAAACGACTTGCAATCGTTGCGGGCGGCGCGCTTGCCATCGCGACTGCGGCCATCCCCTTGACCGCTTCCGTCGCGCA
ACCGTCCTCGAACACGGCCGCCGCGAGCCGAACGGCGATCTTCACGGTCGAGAACATGACCTGCGCCCTGTGCCCGGTTA
CGGTCAAGAAGGCCATGGAGGGCGTAAAGGGCGTGAAGTCGGTCCGGATCGACTTCGATGCCAAGACCGCCACAGTGGTG
TTTGATCCATCGACAGCAACGATCACGGCTATCGCTGCCGCTTCCACAAACGCGGGCTATCCGGCATCGGTCAAGAACAG
AAGCCCGTGA

Upstream 100 bases:

>100_bases
CCGTCATCACCAAAACGATCCTCTGGCTTTCGACCGTGCTGGTCCTCCTCGCACTGACGATCGACTGGTGGGCACCCTAT
TTCTACTAGGAGAAAGCAGC

Downstream 100 bases:

>100_bases
GGAGCGCGATGGAGATCCAGACGAACGGGAAAAGAAGCTGCCATGACGGACTACCATGCGCCCAAAGGAAGAGAGACCGT
CTATGACCTTGCCGTCATCG

Product: heavy metal transport/detoxification protein

Products: NA

Alternate protein names: Mercury scavenger protein; Periplasmic mercury ion-binding protein [H]

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MKRLAIVAGGALAIATAAIPLTASVAQPSSNTAAASRTAIFTVENMTCALCPVTVKKAMEGVKGVKSVRIDFDAKTATVV
FDPSTATITAIAAASTNAGYPASVKNRSP

Sequences:

>Translated_109_residues
MKRLAIVAGGALAIATAAIPLTASVAQPSSNTAAASRTAIFTVENMTCALCPVTVKKAMEGVKGVKSVRIDFDAKTATVV
FDPSTATITAIAAASTNAGYPASVKNRSP
>Mature_109_residues
MKRLAIVAGGALAIATAAIPLTASVAQPSSNTAAASRTAIFTVENMTCALCPVTVKKAMEGVKGVKSVRIDFDAKTATVV
FDPSTATITAIAAASTNAGYPASVKNRSP

Specific function: Mercury scavenger that specifically binds to one mercury ion and which passes it to the mercuric reductase (merA) via the merT protein [H]

COG id: COG2608

COG function: function code P; Copper chaperone

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HMA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001757
- InterPro:   IPR017969
- InterPro:   IPR006121
- InterPro:   IPR011795 [H]

Pfam domain/function: PF00403 HMA [H]

EC number: NA

Molecular weight: Translated: 10940; Mature: 10940

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: PS50846 HMA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLAIVAGGALAIATAAIPLTASVAQPSSNTAAASRTAIFTVENMTCALCPVTVKKAME
CCEEEEEECCHHEEEEHHCCCEEECCCCCCCCCCCCEEEEEEECCCEEEECHHHHHHHHH
GVKGVKSVRIDFDAKTATVVFDPSTATITAIAAASTNAGYPASVKNRSP
HCCCCEEEEEEECCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRLAIVAGGALAIATAAIPLTASVAQPSSNTAAASRTAIFTVENMTCALCPVTVKKAME
CCEEEEEECCHHEEEEHHCCCEEECCCCCCCCCCCCEEEEEEECCCEEEECHHHHHHHHH
GVKGVKSVRIDFDAKTATVVFDPSTATITAIAAASTNAGYPASVKNRSP
HCCCCEEEEEEECCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9167257 [H]