| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is merP [H]
Identifier: 103488161
GI number: 103488161
Start: 2829245
End: 2829574
Strand: Reverse
Name: merP [H]
Synonym: Sala_2684
Alternate gene names: 103488161
Gene position: 2829574-2829245 (Counterclockwise)
Preceding gene: 103488162
Following gene: 103488160
Centisome position: 84.59
GC content: 62.12
Gene sequence:
>330_bases ATGAAACGACTTGCAATCGTTGCGGGCGGCGCGCTTGCCATCGCGACTGCGGCCATCCCCTTGACCGCTTCCGTCGCGCA ACCGTCCTCGAACACGGCCGCCGCGAGCCGAACGGCGATCTTCACGGTCGAGAACATGACCTGCGCCCTGTGCCCGGTTA CGGTCAAGAAGGCCATGGAGGGCGTAAAGGGCGTGAAGTCGGTCCGGATCGACTTCGATGCCAAGACCGCCACAGTGGTG TTTGATCCATCGACAGCAACGATCACGGCTATCGCTGCCGCTTCCACAAACGCGGGCTATCCGGCATCGGTCAAGAACAG AAGCCCGTGA
Upstream 100 bases:
>100_bases CCGTCATCACCAAAACGATCCTCTGGCTTTCGACCGTGCTGGTCCTCCTCGCACTGACGATCGACTGGTGGGCACCCTAT TTCTACTAGGAGAAAGCAGC
Downstream 100 bases:
>100_bases GGAGCGCGATGGAGATCCAGACGAACGGGAAAAGAAGCTGCCATGACGGACTACCATGCGCCCAAAGGAAGAGAGACCGT CTATGACCTTGCCGTCATCG
Product: heavy metal transport/detoxification protein
Products: NA
Alternate protein names: Mercury scavenger protein; Periplasmic mercury ion-binding protein [H]
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MKRLAIVAGGALAIATAAIPLTASVAQPSSNTAAASRTAIFTVENMTCALCPVTVKKAMEGVKGVKSVRIDFDAKTATVV FDPSTATITAIAAASTNAGYPASVKNRSP
Sequences:
>Translated_109_residues MKRLAIVAGGALAIATAAIPLTASVAQPSSNTAAASRTAIFTVENMTCALCPVTVKKAMEGVKGVKSVRIDFDAKTATVV FDPSTATITAIAAASTNAGYPASVKNRSP >Mature_109_residues MKRLAIVAGGALAIATAAIPLTASVAQPSSNTAAASRTAIFTVENMTCALCPVTVKKAMEGVKGVKSVRIDFDAKTATVV FDPSTATITAIAAASTNAGYPASVKNRSP
Specific function: Mercury scavenger that specifically binds to one mercury ion and which passes it to the mercuric reductase (merA) via the merT protein [H]
COG id: COG2608
COG function: function code P; Copper chaperone
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HMA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001757 - InterPro: IPR017969 - InterPro: IPR006121 - InterPro: IPR011795 [H]
Pfam domain/function: PF00403 HMA [H]
EC number: NA
Molecular weight: Translated: 10940; Mature: 10940
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: PS50846 HMA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLAIVAGGALAIATAAIPLTASVAQPSSNTAAASRTAIFTVENMTCALCPVTVKKAME CCEEEEEECCHHEEEEHHCCCEEECCCCCCCCCCCCEEEEEEECCCEEEECHHHHHHHHH GVKGVKSVRIDFDAKTATVVFDPSTATITAIAAASTNAGYPASVKNRSP HCCCCEEEEEEECCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MKRLAIVAGGALAIATAAIPLTASVAQPSSNTAAASRTAIFTVENMTCALCPVTVKKAME CCEEEEEECCHHEEEEHHCCCEEECCCCCCCCCCCCEEEEEEECCCEEEECHHHHHHHHH GVKGVKSVRIDFDAKTATVVFDPSTATITAIAAASTNAGYPASVKNRSP HCCCCEEEEEEECCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9167257 [H]