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The map label for this gene is 103488152

Identifier: 103488152

GI number: 103488152

Start: 2821340

End: 2821858

Strand: Reverse

Name: 103488152

Synonym: Sala_2675

Alternate gene names: NA

Gene position: 2821858-2821340 (Counterclockwise)

Preceding gene: 103488153

Following gene: 103488151

Centisome position: 84.36

GC content: 66.09

Gene sequence:

>519_bases
ATGGGAAAATTACGCGAAGTCTTGAACGATCTCGATGGCGGCAATTGCGCGCTGCCGCTGGCGCTGGAGGCGATGGGCGA
ACGCTGGTCGTTCATGATCCTGCGCGCGGCGTTCAACGGCGTCCATCATTTCGAGGAGTTCCAGCAGGAGCTCAACATCG
CGCGCAACATATTGTCGAACCGCCTGTCGAAGCTGGTCGACCATGGCATCATGGCGCGCGAGGTGATGGCCGAGGACCGG
CGCAAGGTGCGCTACCAGCTCACCGAGAAGGGCATCGACCTGCTGCCCGCGATGATCGCGCTTCGCCAGTGGGGTGAAAA
ATGGGGCGCTGGCGTGCCTTCCACCCCCGTGCTCGTCGATGCCCGCGACGAACAGCCGATCGGCCCCGTCCGGCTGACCG
CGCACGACGGCCGCGTGATCGGTTATAAGGAGCTGCTGTGGAAGCATCGCTCGGAGCTTCAGCCGCTCGGCCAGGCGCGC
GTGCGCGCCGACGGGCCGGCGCCGGTCGCGGCCGGATGA

Upstream 100 bases:

>100_bases
CGCCTGCTCGGCTGACGCACCACCCGCTTCCCGTTGCGAAATGCAACGAAGCCTCTATATTTTTTTGGCACGGGCGGCGA
TTTTACGTTAGGGCTTGGCC

Downstream 100 bases:

>100_bases
CCCACGGCAGCGCCGCCCGCCTTGCCGCGCGCGGTCGTTGACCCACGCTCTCGCCCGCACTTCCATGCCATTGTTCCGAC
TGACCTCGCCCGGTCCCTTT

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MGKLREVLNDLDGGNCALPLALEAMGERWSFMILRAAFNGVHHFEEFQQELNIARNILSNRLSKLVDHGIMAREVMAEDR
RKVRYQLTEKGIDLLPAMIALRQWGEKWGAGVPSTPVLVDARDEQPIGPVRLTAHDGRVIGYKELLWKHRSELQPLGQAR
VRADGPAPVAAG

Sequences:

>Translated_172_residues
MGKLREVLNDLDGGNCALPLALEAMGERWSFMILRAAFNGVHHFEEFQQELNIARNILSNRLSKLVDHGIMAREVMAEDR
RKVRYQLTEKGIDLLPAMIALRQWGEKWGAGVPSTPVLVDARDEQPIGPVRLTAHDGRVIGYKELLWKHRSELQPLGQAR
VRADGPAPVAAG
>Mature_171_residues
GKLREVLNDLDGGNCALPLALEAMGERWSFMILRAAFNGVHHFEEFQQELNIARNILSNRLSKLVDHGIMAREVMAEDRR
KVRYQLTEKGIDLLPAMIALRQWGEKWGAGVPSTPVLVDARDEQPIGPVRLTAHDGRVIGYKELLWKHRSELQPLGQARV
RADGPAPVAAG

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 19223; Mature: 19091

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKLREVLNDLDGGNCALPLALEAMGERWSFMILRAAFNGVHHFEEFQQELNIARNILSN
CCHHHHHHHHCCCCCEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLSKLVDHGIMAREVMAEDRRKVRYQLTEKGIDLLPAMIALRQWGEKWGAGVPSTPVLVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
ARDEQPIGPVRLTAHDGRVIGYKELLWKHRSELQPLGQARVRADGPAPVAAG
CCCCCCCCCEEEEECCCCEECHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
GKLREVLNDLDGGNCALPLALEAMGERWSFMILRAAFNGVHHFEEFQQELNIARNILSN
CHHHHHHHHCCCCCEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLSKLVDHGIMAREVMAEDRRKVRYQLTEKGIDLLPAMIALRQWGEKWGAGVPSTPVLVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
ARDEQPIGPVRLTAHDGRVIGYKELLWKHRSELQPLGQARVRADGPAPVAAG
CCCCCCCCCEEEEECCCCEECHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]