| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103488113
Identifier: 103488113
GI number: 103488113
Start: 2772597
End: 2773124
Strand: Reverse
Name: 103488113
Synonym: Sala_2636
Alternate gene names: NA
Gene position: 2773124-2772597 (Counterclockwise)
Preceding gene: 103488114
Following gene: 103488112
Centisome position: 82.9
GC content: 60.42
Gene sequence:
>528_bases ATGCTCTATCCGTCACGCGATCTCCATGGCCCGGCACAGTCGCGGGCAGTCCGCGACCTGTTTCAAAGCCTGTTCGTCGC CGAACTCATCCATCCCAGCCCGAAGCTGTGGCTTTTCTTCGCTTGGATCAGCGATGTCGAGATCATCGACAATTCCGCGC GCGAGTTCGCAGCGCTCGAGCCGGATTGGCCGGCGGCGCCGATCCGCTTGTCGCAAGTGCTCCGCGCCTTACTCGCCCGT GGCGTCGAACTTCGGCTGGTGATCCGCGCGGACGGCCACAATGACTATTTCATCGCTCGCCTTCAGACACTCAAGGCGCG CTACGGCGATCAGATCAAATGGACCGTGGAGAAGAGTTTCCACGCCAAGGGCCTGCTCGGTGCCGACTACTTCTTGAGCG GTTCGATGAATCTCACGCTCAACGGCATTTCGATCAACGGCGAACATCTCGTACTGCGTACCGACCCGGCGGCGGTCGCC GAGCAATCGATCGAGCTTGAATCGCGCTGGGAAAGCCAGATGACATGA
Upstream 100 bases:
>100_bases CTGTCAGCGTCGGTGTGCTTCAGTTCTTCCCCGCCACCGAGCGGGTCGAACGCGCCGATGGCAGAATTTTCGCGACGCTG ACCCTGAGGGAGCAGGTCTG
Downstream 100 bases:
>100_bases TCGGCCCGAACCTCGATGCGGCGCAGGCCGTACTGGCAGATCTCGTCGCCCTCCAGCCATGCGCGAGCGCGAGCAATGAA ATCGCCGCATTGTGCGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MLYPSRDLHGPAQSRAVRDLFQSLFVAELIHPSPKLWLFFAWISDVEIIDNSAREFAALEPDWPAAPIRLSQVLRALLAR GVELRLVIRADGHNDYFIARLQTLKARYGDQIKWTVEKSFHAKGLLGADYFLSGSMNLTLNGISINGEHLVLRTDPAAVA EQSIELESRWESQMT
Sequences:
>Translated_175_residues MLYPSRDLHGPAQSRAVRDLFQSLFVAELIHPSPKLWLFFAWISDVEIIDNSAREFAALEPDWPAAPIRLSQVLRALLAR GVELRLVIRADGHNDYFIARLQTLKARYGDQIKWTVEKSFHAKGLLGADYFLSGSMNLTLNGISINGEHLVLRTDPAAVA EQSIELESRWESQMT >Mature_175_residues MLYPSRDLHGPAQSRAVRDLFQSLFVAELIHPSPKLWLFFAWISDVEIIDNSAREFAALEPDWPAAPIRLSQVLRALLAR GVELRLVIRADGHNDYFIARLQTLKARYGDQIKWTVEKSFHAKGLLGADYFLSGSMNLTLNGISINGEHLVLRTDPAAVA EQSIELESRWESQMT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19787; Mature: 19787
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYPSRDLHGPAQSRAVRDLFQSLFVAELIHPSPKLWLFFAWISDVEIIDNSAREFAALE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHCCCCHHHEECC PDWPAAPIRLSQVLRALLARGVELRLVIRADGHNDYFIARLQTLKARYGDQIKWTVEKSF CCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCEEHHHHHHHHHHCCCEEEEEEECCC HAKGLLGADYFLSGSMNLTLNGISINGEHLVLRTDPAAVAEQSIELESRWESQMT CCCCCCCCCEEECCCCEEEEEEEEECCCEEEEECCCHHHHHHHCCHHHHHHHCCC >Mature Secondary Structure MLYPSRDLHGPAQSRAVRDLFQSLFVAELIHPSPKLWLFFAWISDVEIIDNSAREFAALE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHCCCCHHHEECC PDWPAAPIRLSQVLRALLARGVELRLVIRADGHNDYFIARLQTLKARYGDQIKWTVEKSF CCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCEEHHHHHHHHHHCCCEEEEEEECCC HAKGLLGADYFLSGSMNLTLNGISINGEHLVLRTDPAAVAEQSIELESRWESQMT CCCCCCCCCEEECCCCEEEEEEEEECCCEEEEECCCHHHHHHHCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA