Click here to switch to the map view.

The map label for this gene is traG [H]

Identifier: 103488096

GI number: 103488096

Start: 2758284

End: 2760347

Strand: Reverse

Name: traG [H]

Synonym: Sala_2618

Alternate gene names: 103488096

Gene position: 2760347-2758284 (Counterclockwise)

Preceding gene: 103488097

Following gene: 103488095

Centisome position: 82.52

GC content: 64.39

Gene sequence:

>2064_bases
ATGAACGCAACCCGTATCCTCTGGGGCCAGGTCATCGCCGTCTTCGGCGTGACGCTGGCTGGCATCTGGGCGGCGACCCA
ATGGACTGCCCATGCACTCGCCTATCAGCCCGAGCTGGGTGAGCCGTGGTTCTCGCTGGGGTCATGGCCGATCTATCCGC
CGCCTGCCTTTTTCTGGTGGTGGTTCGCGTTCGACGCCTATGCGCCGAAGATCTTCGAGACCGGTGCGCTCATCGCGGTG
TCGGGCGCGATGGCCGGGATCGTCATCGCGATCGTCCTGTCGGTCTGGCGCGCAAAGGAAGCGAAGAAAGCCGAAACCTA
TGGTTCGGCGCGCTGGGCCAGCGAGCGCGAAGTGAAGCGGGTGAAGATGCTCGGCGACGACGGCGTCGTTCTTGGCCACT
TCGCGCAGCGCTATCTGCGCCACGATGGTCCCGAGCATGTCTTGTGTTTCGCACCGACCCGGTCGGGCAAGGGCGTAGGT
CTCGTCATACCCTCGCTCCTGACCTGGCCGGGAAGCTGCATCGTCCACGACATCAAGGGCGAGAACTGGCAGCTCACCTC
AGGCTTCCGGTCACGCCATGGGCGCGTGTTGCTGTTCGATCCGACCAACCGGGCCAGCGCCGCCTATAATCCGCTGCTCG
AGGTCCGGAAGGGTGAGTGGGAAGTGCGCGACGTGCAGAATGTCGCCGACGTGCTGGTCGATCCCGAAGGCAGCCTCGAG
AAGCGCAATCATTGGGAAAAGACCAGCCACGCGCTGCTGGTCGGCGCCATCCTCCATGTTCTCTATGCGGAGGAAGACAA
GACGCTGGCCGGCGTCGCCGCCTTCCTCTCCGATCCGCGTCGCCCGATCGAGACCACGCTGCGGGCGATGATGACCACGC
CCCATCTGGGCGAGGCCGGGGTGCATCCTGTCGTCGCCAGCGCCGCGCGCGAGCTGCTCAACAAGTCGGAGAACGAACGC
TCGGGCGTGCTGTCCACCGCCATGTCGTTCCTCGGCCTCTATCGCGATCCGATCGTGGCGAGAGTGACGCGGGCCTGCGA
CTGGCGCATCGCCGATCTGGTCGATGGGCCGGCACCGGTCTCGCTCTATCTCGTCGTGCCGCCTTCAGACATCAGCCGCA
CCAAGCCGCTCATCCGCCTGATCCTCAACCAGGTCGGCCGGCGTCTGACCGAGGAACTCAATCCCAAAGGCCGTCCGCAC
CGGCTGCTGCTGATGCTCGACGAGTTTCCGGCGCTCGGGCGGCTCGACTTCTTTGAAAGCGCGCTCGCCTTCATGGCGGG
CTACGGGATCAAGGCCTTCCTCATCGCCCAGAGCCTCAACCAGATCGAGAAGGCCTATGGGCAGAACAATGCGATCCTCG
ACAATTGCCATGTCCGCGTCGCCTTCGCGACCAATGACGAGCGCACCGCCAAGCGGATCTCGGATGCGCTCGGCACCGCC
ACTGAAATGCGCGCGATGAAAAACTATGCCGGGCACAGGCTCTCGCCCTGGCTCGGACATTTGATGGTCTCACGAACCGA
GACGGCGCGACCCTTGCTCACGCCTGGCGAGATCATACAGCTGTCCCCGGAGGAGGAGATTGTCATGGTGGGCGGCGTAC
CGCCAATCCGGGCTATGAAGGCACGCTACTTCACCGATCCGCGCTTTACCGTGCGGTTGCTGCCGCCACCGACACCCAAA
CCACTCGATCCGAAGCGGCGGCCCAAGGATGACTGGTCCACTCTCATACCGGTGAATGCGCCGTCAGCCCCACCCTCCAA
TCTTCCCGCGGCTGATGACGGGGGCGGGAAGGCGGAAGCCGATGATGCGGAGCCGCAGGGCATCCGGGAAGGCGATCAGG
CTGACGCTTCTACCGACGCAGCCAATGCTGGCATCCGCCGCGAGCCCGATCTTGGCGAGCATGAGGAAATCGTTCCTCCG
GCGAAGGAAATGTCTGGGCAAGAAACGCCCGATGAGGACAATCAGGATGAGGATTCCGCACGGGCGAAACGCGAGGCGGA
GCGGACCATGCGCCGCAATGCCCGTAACGCGTCGCTCGACCCGGATGACGGCATCGTGCTGTGA

Upstream 100 bases:

>100_bases
GGCACCATGACGCCCGGTGGCGGCGTCGATTGGTCGCTCGGCCGCGGAAGGGGGCTTGGCCTGTGATCCTCGATATCTTC
ATCAGCAGGAGCTTCATCCC

Downstream 100 bases:

>100_bases
GTGGAGGCCACGTCAAGCGCAGCATCCGGCTACGGGCTGATCTGGTGCGCCGTCTCGCCGATCACGCCGCCGCGCGGAAC
GCCAGCCAGGCCGCGATCAT

Product: conjugal transfer coupling protein TraG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 687; Mature: 687

Protein sequence:

>687_residues
MNATRILWGQVIAVFGVTLAGIWAATQWTAHALAYQPELGEPWFSLGSWPIYPPPAFFWWWFAFDAYAPKIFETGALIAV
SGAMAGIVIAIVLSVWRAKEAKKAETYGSARWASEREVKRVKMLGDDGVVLGHFAQRYLRHDGPEHVLCFAPTRSGKGVG
LVIPSLLTWPGSCIVHDIKGENWQLTSGFRSRHGRVLLFDPTNRASAAYNPLLEVRKGEWEVRDVQNVADVLVDPEGSLE
KRNHWEKTSHALLVGAILHVLYAEEDKTLAGVAAFLSDPRRPIETTLRAMMTTPHLGEAGVHPVVASAARELLNKSENER
SGVLSTAMSFLGLYRDPIVARVTRACDWRIADLVDGPAPVSLYLVVPPSDISRTKPLIRLILNQVGRRLTEELNPKGRPH
RLLLMLDEFPALGRLDFFESALAFMAGYGIKAFLIAQSLNQIEKAYGQNNAILDNCHVRVAFATNDERTAKRISDALGTA
TEMRAMKNYAGHRLSPWLGHLMVSRTETARPLLTPGEIIQLSPEEEIVMVGGVPPIRAMKARYFTDPRFTVRLLPPPTPK
PLDPKRRPKDDWSTLIPVNAPSAPPSNLPAADDGGGKAEADDAEPQGIREGDQADASTDAANAGIRREPDLGEHEEIVPP
AKEMSGQETPDEDNQDEDSARAKREAERTMRRNARNASLDPDDGIVL

Sequences:

>Translated_687_residues
MNATRILWGQVIAVFGVTLAGIWAATQWTAHALAYQPELGEPWFSLGSWPIYPPPAFFWWWFAFDAYAPKIFETGALIAV
SGAMAGIVIAIVLSVWRAKEAKKAETYGSARWASEREVKRVKMLGDDGVVLGHFAQRYLRHDGPEHVLCFAPTRSGKGVG
LVIPSLLTWPGSCIVHDIKGENWQLTSGFRSRHGRVLLFDPTNRASAAYNPLLEVRKGEWEVRDVQNVADVLVDPEGSLE
KRNHWEKTSHALLVGAILHVLYAEEDKTLAGVAAFLSDPRRPIETTLRAMMTTPHLGEAGVHPVVASAARELLNKSENER
SGVLSTAMSFLGLYRDPIVARVTRACDWRIADLVDGPAPVSLYLVVPPSDISRTKPLIRLILNQVGRRLTEELNPKGRPH
RLLLMLDEFPALGRLDFFESALAFMAGYGIKAFLIAQSLNQIEKAYGQNNAILDNCHVRVAFATNDERTAKRISDALGTA
TEMRAMKNYAGHRLSPWLGHLMVSRTETARPLLTPGEIIQLSPEEEIVMVGGVPPIRAMKARYFTDPRFTVRLLPPPTPK
PLDPKRRPKDDWSTLIPVNAPSAPPSNLPAADDGGGKAEADDAEPQGIREGDQADASTDAANAGIRREPDLGEHEEIVPP
AKEMSGQETPDEDNQDEDSARAKREAERTMRRNARNASLDPDDGIVL
>Mature_687_residues
MNATRILWGQVIAVFGVTLAGIWAATQWTAHALAYQPELGEPWFSLGSWPIYPPPAFFWWWFAFDAYAPKIFETGALIAV
SGAMAGIVIAIVLSVWRAKEAKKAETYGSARWASEREVKRVKMLGDDGVVLGHFAQRYLRHDGPEHVLCFAPTRSGKGVG
LVIPSLLTWPGSCIVHDIKGENWQLTSGFRSRHGRVLLFDPTNRASAAYNPLLEVRKGEWEVRDVQNVADVLVDPEGSLE
KRNHWEKTSHALLVGAILHVLYAEEDKTLAGVAAFLSDPRRPIETTLRAMMTTPHLGEAGVHPVVASAARELLNKSENER
SGVLSTAMSFLGLYRDPIVARVTRACDWRIADLVDGPAPVSLYLVVPPSDISRTKPLIRLILNQVGRRLTEELNPKGRPH
RLLLMLDEFPALGRLDFFESALAFMAGYGIKAFLIAQSLNQIEKAYGQNNAILDNCHVRVAFATNDERTAKRISDALGTA
TEMRAMKNYAGHRLSPWLGHLMVSRTETARPLLTPGEIIQLSPEEEIVMVGGVPPIRAMKARYFTDPRFTVRLLPPPTPK
PLDPKRRPKDDWSTLIPVNAPSAPPSNLPAADDGGGKAEADDAEPQGIREGDQADASTDAANAGIRREPDLGEHEEIVPP
AKEMSGQETPDEDNQDEDSARAKREAERTMRRNARNASLDPDDGIVL

Specific function: Required for conjugative transfer of plasmid RP4. Binds tightly and specifically to the relaxase traI. Can also bind to DNA without sequence specificity. May form a pore-like structure that could serve as a channel for DNA transfer [H]

COG id: COG3505

COG function: function code U; Type IV secretory pathway, VirD4 components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the virD4/traG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003688 [H]

Pfam domain/function: PF02534 TraG [H]

EC number: NA

Molecular weight: Translated: 75723; Mature: 75723

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNATRILWGQVIAVFGVTLAGIWAATQWTAHALAYQPELGEPWFSLGSWPIYPPPAFFWW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHCCCCCCCCCHHHHHH
WFAFDAYAPKIFETGALIAVSGAMAGIVIAIVLSVWRAKEAKKAETYGSARWASEREVKR
HHHHHHHCCHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHH
VKMLGDDGVVLGHFAQRYLRHDGPEHVLCFAPTRSGKGVGLVIPSLLTWPGSCIVHDIKG
HHHCCCCCEEHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEHHHHHCCCCCEEEEECCC
ENWQLTSGFRSRHGRVLLFDPTNRASAAYNPLLEVRKGEWEVRDVQNVADVLVDPEGSLE
CCEEEECCHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCH
KRNHWEKTSHALLVGAILHVLYAEEDKTLAGVAAFLSDPRRPIETTLRAMMTTPHLGEAG
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCC
VHPVVASAARELLNKSENERSGVLSTAMSFLGLYRDPIVARVTRACDWRIADLVDGPAPV
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHCCCCCCE
SLYLVVPPSDISRTKPLIRLILNQVGRRLTEELNPKGRPHRLLLMLDEFPALGRLDFFES
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHH
ALAFMAGYGIKAFLIAQSLNQIEKAYGQNNAILDNCHVRVAFATNDERTAKRISDALGTA
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEECCEEEEEEECCCHHHHHHHHHHHCHH
TEMRAMKNYAGHRLSPWLGHLMVSRTETARPLLTPGEIIQLSPEEEIVMVGGVPPIRAMK
HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEEECCCCCHHHHH
ARYFTDPRFTVRLLPPPTPKPLDPKRRPKDDWSTLIPVNAPSAPPSNLPAADDGGGKAEA
HHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
DDAEPQGIREGDQADASTDAANAGIRREPDLGEHEEIVPPAKEMSGQETPDEDNQDEDSA
CCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHH
RAKREAERTMRRNARNASLDPDDGIVL
HHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNATRILWGQVIAVFGVTLAGIWAATQWTAHALAYQPELGEPWFSLGSWPIYPPPAFFWW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHCCCCCCCCCHHHHHH
WFAFDAYAPKIFETGALIAVSGAMAGIVIAIVLSVWRAKEAKKAETYGSARWASEREVKR
HHHHHHHCCHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHH
VKMLGDDGVVLGHFAQRYLRHDGPEHVLCFAPTRSGKGVGLVIPSLLTWPGSCIVHDIKG
HHHCCCCCEEHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEHHHHHCCCCCEEEEECCC
ENWQLTSGFRSRHGRVLLFDPTNRASAAYNPLLEVRKGEWEVRDVQNVADVLVDPEGSLE
CCEEEECCHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCH
KRNHWEKTSHALLVGAILHVLYAEEDKTLAGVAAFLSDPRRPIETTLRAMMTTPHLGEAG
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCC
VHPVVASAARELLNKSENERSGVLSTAMSFLGLYRDPIVARVTRACDWRIADLVDGPAPV
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHCCCCCCE
SLYLVVPPSDISRTKPLIRLILNQVGRRLTEELNPKGRPHRLLLMLDEFPALGRLDFFES
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHH
ALAFMAGYGIKAFLIAQSLNQIEKAYGQNNAILDNCHVRVAFATNDERTAKRISDALGTA
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEECCEEEEEEECCCHHHHHHHHHHHCHH
TEMRAMKNYAGHRLSPWLGHLMVSRTETARPLLTPGEIIQLSPEEEIVMVGGVPPIRAMK
HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEEECCCCCHHHHH
ARYFTDPRFTVRLLPPPTPKPLDPKRRPKDDWSTLIPVNAPSAPPSNLPAADDGGGKAEA
HHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
DDAEPQGIREGDQADASTDAANAGIRREPDLGEHEEIVPPAKEMSGQETPDEDNQDEDSA
CCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHH
RAKREAERTMRRNARNASLDPDDGIVL
HHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1665997; 8021214; 11976307 [H]