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The map label for this gene is 103488090

Identifier: 103488090

GI number: 103488090

Start: 2754750

End: 2755019

Strand: Reverse

Name: 103488090

Synonym: Sala_2612

Alternate gene names: NA

Gene position: 2755019-2754750 (Counterclockwise)

Preceding gene: 103488091

Following gene: 103488089

Centisome position: 82.36

GC content: 70.37

Gene sequence:

>270_bases
ATGAACAGCGCGGACGACATCCCGGGCTATTACGCGCCGGTCCACCGCGCGCTCTGCGAGCCCATCCTGCTCGGCGGCGC
GCCACGGAGCCTCGCCATCGTCAACGGCACGCTCGCCGGGGCCATCGGTCTCGGCTTGCGCCTGTGGATCGCCGGCCTCG
CGCTCTGGGCGATCGGCCATGCACTGTCGGTCTGGGCCGCGCGGCGCGATCCGCAGTTTGTCGATGTCGCCCGCCGCCAC
CTCAAATATCCGGTCTGGATGCGGCCATGA

Upstream 100 bases:

>100_bases
TCCGGCGGCTGATCCAGATCGTGTTCGGCCTGTCGATCGCCTTTGCCGCCAGCTCCTTCTTCCTCAGCTTCTTCAGCTTC
GGCGGCGGGGCGCTGGTGTG

Downstream 100 bases:

>100_bases
TGAATTTGTCCGAATATCGCAGCCGCGCTACGTCTCTTGCCGACTTCTTGCCCTGGGTCGCACTGGTGGCGCCGGGCGTG
GTGCTTAACAAGGACGGATC

Product: putative conjugal transfer protein

Products: NA

Alternate protein names: Conjugal Transfer Protein TrbB; Conjugal Transfer Protein; Conjugal Transfer TrbD Transmembrane Protein; Type IV Secretory Pathway VirB3 Family Protein; Conjugal Transfer Trbd Transmembrane Protein; Type IV Secretory Pathway TrbD Component; Type Iv Secretory Pathway Virb3 Family Protein; Conjugal Transfer Protein Trbd; Type IV Secretory Pathway TrbD Component-Like Protein; Conjugative Transfer Protein TrbD; P-Type Conjugative Transfer Protein TrbD

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MNSADDIPGYYAPVHRALCEPILLGGAPRSLAIVNGTLAGAIGLGLRLWIAGLALWAIGHALSVWAARRDPQFVDVARRH
LKYPVWMRP

Sequences:

>Translated_89_residues
MNSADDIPGYYAPVHRALCEPILLGGAPRSLAIVNGTLAGAIGLGLRLWIAGLALWAIGHALSVWAARRDPQFVDVARRH
LKYPVWMRP
>Mature_89_residues
MNSADDIPGYYAPVHRALCEPILLGGAPRSLAIVNGTLAGAIGLGLRLWIAGLALWAIGHALSVWAARRDPQFVDVARRH
LKYPVWMRP

Specific function: Unknown

COG id: COG5268

COG function: function code NU; Type IV secretory pathway, TrbD component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9683; Mature: 9683

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSADDIPGYYAPVHRALCEPILLGGAPRSLAIVNGTLAGAIGLGLRLWIAGLALWAIGH
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
ALSVWAARRDPQFVDVARRHLKYPVWMRP
HHHHHHHCCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNSADDIPGYYAPVHRALCEPILLGGAPRSLAIVNGTLAGAIGLGLRLWIAGLALWAIGH
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
ALSVWAARRDPQFVDVARRHLKYPVWMRP
HHHHHHHCCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA