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The map label for this gene is trbE [H]

Identifier: 103488089

GI number: 103488089

Start: 2752264

End: 2754753

Strand: Reverse

Name: trbE [H]

Synonym: Sala_2611

Alternate gene names: 103488089

Gene position: 2754753-2752264 (Counterclockwise)

Preceding gene: 103488090

Following gene: 103488088

Centisome position: 82.35

GC content: 64.78

Gene sequence:

>2490_bases
ATGATGAATTTGTCCGAATATCGCAGCCGCGCTACGTCTCTTGCCGACTTCTTGCCCTGGGTCGCACTGGTGGCGCCGGG
CGTGGTGCTTAACAAGGACGGATCGTTCCAGCGCACCGCGCGCTTTCGCGGTCCCGATCTCGACAGCGCCACGCCCGCCG
AACTGGTTTCGGTGACCGCGCGACTCAACAATGCGCTGCGCCGTCTCGGTTCGGGTTGGGCGGTGTTCGTGGAAGCACAG
CGCGTTCCCGCGCTGGACTATCCGAACAGTGCGTTTCCCGATCCGGTATCGGCACTCGTCGATATGGAGCGGGGCGAGCA
GTTCCGGGAAGCGGGAAGCCATTTCGAGAGCGGCTATTATCTGACGCTGCTCTGGATGCCGCCCGCCGAAGAGGCCGCCC
GCGCGGAGAACTGGCTCTATGAAGGCCGTTCGGGCGGCGGCGTCGATCCGCATGAGCAACTGGCCGGCTTCATCGATCGG
ACGAACCGGGTGCTCCATCTGGTCGAAGGCTTCATGCCTGAGGTGGGCTGGCTCGATGACGCCGAGACCCTGACCTATCT
CCATTCATGCGTATCGACCAGGCGCCAGCGCGTGCGGGTGCCCGAGACACCTTGCTATCTCGATGCACTGCTCACCGATG
AGGGCCTGACCGGCGGGCTCGAGCCGAAGCTGGGCGAGCATCATCTGCGCGTGGCTACAGCCACCGGCTTTCCAACGGCG
ACCTTTCCGAGCCTGCTCGACGAACTGAACCGGCTGGCCTTCCCCTATCGCTGGTCGACGCGGGCGATCATGCTCGACAA
GACCGACGCCACCAAATTGCTGACGAAGATCCGGCGCCAGTGGTTCGCCAAGCGCAAGAGCGTCGCCGCGATCCTGAAAG
AGGTGATGACCAACGAAGCATCGGTGCTGACCGATAGCGATGCGTCGAACAAGGCGGCCGATGCGGACCTCGCTTTGCAG
GAGCTCGGCGCGGACCATTCGGGGATCGCCTATGTAACCGCCACCGTGACGGTGTGGGATCGCGATCCTGCATTGGCGGC
TGAGAAGCTGCGGCTGGTCGAGAAGATCATCCAGGGCCGCGACTTCACGGCGACAATCGAGGGCATGAACGCGATCGAGG
CCTGGCTCGGGTCATTGCCCGGCCATGTCTATGCCAACGTTCGCCAGCCTCCGATTTCCACGCTCAATCTCGCCCACCTG
ATCCCCCTGTCAGCGGTGTGGGCGGGGGCGGAACGGGACGAGCATTTCGGTGATGCCCCCTTGCTTTATGGCAAGACCGA
AGGCTCGACCCCGTTCCGTCTTTCGCTTCATGTCGGCGATGTCGGCCATACGCTGATCGTCGGGCCGACGGGTGCCGGCA
AGTCGGTGCTGCTGGCGCTGATGGCAATGCAGTTCCGCCGCTATGCCGACAATCAGATCTTCGCCTTCGACTTCGGCGGC
TCGATCCGGGCGGCAGCGATCGCCTGTGGCGGCGACTGGCAGGATCTCGGCGGCGCACTGCATGACCGGGACGGTGGAGA
GGGGGTGACCCTGCAACCGCTTGCCCGGATCGACGATCCCGGCGAGCGTGCCTGGGCTGCGGAATGGCTTGCAGCCATCC
TTTCCAGTGAAGGCGTCACGGTCGATCCCGCCGCCAAGGAGCATCTGTGGACCGCGCTCGGATCGCTCGCCTCGGCGCCG
CCGCCCGAGCGCACGCTCACCGGGCTGGCCGTGCTCCTGCAAAGCCAAGAGCTGAAACAGGCGCTCGCCCCTTATTGCGT
CGGCGGACCCTGGGGGCGGCTGCTCGATGCCGAAGCCGAACATCTGGGTGAGGCGAGTTTCCAGGCATTCGAGACCGAAG
GGCTGGTCGGCGCGGCATCGGCCGCCGCGGTGCTCGCCTATCTCTTCCACCGGATCGAAGGTCGGCTCGACGGGCGCCCC
ACGCTCATCATCATCGACGAGGGCTGGTTGGTACTCGACAGCCCGGCCTTTGCCGCGCAGCTTCGTGAATGGCTGAAGAC
CCTGCGCAAGAAGAATTCATCGGTCATCTTCGCGACCCAGAGCCTGGCCGACATCGAAACGTCGAGCATTGCGCCCGCCA
TCATCGAAAGCTGCCCGACGCGCATCTTCCTTCCCAATGAGCGCGCCGCCGAGCCGCAGATCGCACGCGTATATGAGCGC
TTCGGGCTCAACGATCGCCAGATCGAGATATTGAGCCGGGCAACGCCCAAGCGCGATTATTATTGTCAGTCGCGGCGCGG
CAACCGGCTGTTCGAACTGGGCCTGGGCGAAGTCGCGCTGGCCTTCACCGCCGCATCGTCAAAGTCCGACCAGATCCGCA
TCGGCGAGCTCGTCGCCAAGCATGGGACGCACGCCTTCGCCGCCCATTGGCTCAGGCACCGCGGCCTCTATTGGGCCGCC
GCCCTGCTGCCCGAACCCGATCCGCTGACTGCATCCATCCCGAGCGACGAGCTCTTGCTGCCGCTCGATCCCGAGGAGTT
ACGCTCATGA

Upstream 100 bases:

>100_bases
GGGCGATCGGCCATGCACTGTCGGTCTGGGCCGCGCGGCGCGATCCGCAGTTTGTCGATGTCGCCCGCCGCCACCTCAAA
TATCCGGTCTGGATGCGGCC

Downstream 100 bases:

>100_bases
AGAAATATCCGCTTCGCCGCGCCCTGCTGGCCGGCGCTATCGCTCTGTCCGTCACCGGTACGATGACCGCCGTTCCGGCA
CAGGCGCAGTTCGGTTTCGG

Product: conjugal transfer ATPase TrbE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 829; Mature: 829

Protein sequence:

>829_residues
MMNLSEYRSRATSLADFLPWVALVAPGVVLNKDGSFQRTARFRGPDLDSATPAELVSVTARLNNALRRLGSGWAVFVEAQ
RVPALDYPNSAFPDPVSALVDMERGEQFREAGSHFESGYYLTLLWMPPAEEAARAENWLYEGRSGGGVDPHEQLAGFIDR
TNRVLHLVEGFMPEVGWLDDAETLTYLHSCVSTRRQRVRVPETPCYLDALLTDEGLTGGLEPKLGEHHLRVATATGFPTA
TFPSLLDELNRLAFPYRWSTRAIMLDKTDATKLLTKIRRQWFAKRKSVAAILKEVMTNEASVLTDSDASNKAADADLALQ
ELGADHSGIAYVTATVTVWDRDPALAAEKLRLVEKIIQGRDFTATIEGMNAIEAWLGSLPGHVYANVRQPPISTLNLAHL
IPLSAVWAGAERDEHFGDAPLLYGKTEGSTPFRLSLHVGDVGHTLIVGPTGAGKSVLLALMAMQFRRYADNQIFAFDFGG
SIRAAAIACGGDWQDLGGALHDRDGGEGVTLQPLARIDDPGERAWAAEWLAAILSSEGVTVDPAAKEHLWTALGSLASAP
PPERTLTGLAVLLQSQELKQALAPYCVGGPWGRLLDAEAEHLGEASFQAFETEGLVGAASAAAVLAYLFHRIEGRLDGRP
TLIIIDEGWLVLDSPAFAAQLREWLKTLRKKNSSVIFATQSLADIETSSIAPAIIESCPTRIFLPNERAAEPQIARVYER
FGLNDRQIEILSRATPKRDYYCQSRRGNRLFELGLGEVALAFTAASSKSDQIRIGELVAKHGTHAFAAHWLRHRGLYWAA
ALLPEPDPLTASIPSDELLLPLDPEELRS

Sequences:

>Translated_829_residues
MMNLSEYRSRATSLADFLPWVALVAPGVVLNKDGSFQRTARFRGPDLDSATPAELVSVTARLNNALRRLGSGWAVFVEAQ
RVPALDYPNSAFPDPVSALVDMERGEQFREAGSHFESGYYLTLLWMPPAEEAARAENWLYEGRSGGGVDPHEQLAGFIDR
TNRVLHLVEGFMPEVGWLDDAETLTYLHSCVSTRRQRVRVPETPCYLDALLTDEGLTGGLEPKLGEHHLRVATATGFPTA
TFPSLLDELNRLAFPYRWSTRAIMLDKTDATKLLTKIRRQWFAKRKSVAAILKEVMTNEASVLTDSDASNKAADADLALQ
ELGADHSGIAYVTATVTVWDRDPALAAEKLRLVEKIIQGRDFTATIEGMNAIEAWLGSLPGHVYANVRQPPISTLNLAHL
IPLSAVWAGAERDEHFGDAPLLYGKTEGSTPFRLSLHVGDVGHTLIVGPTGAGKSVLLALMAMQFRRYADNQIFAFDFGG
SIRAAAIACGGDWQDLGGALHDRDGGEGVTLQPLARIDDPGERAWAAEWLAAILSSEGVTVDPAAKEHLWTALGSLASAP
PPERTLTGLAVLLQSQELKQALAPYCVGGPWGRLLDAEAEHLGEASFQAFETEGLVGAASAAAVLAYLFHRIEGRLDGRP
TLIIIDEGWLVLDSPAFAAQLREWLKTLRKKNSSVIFATQSLADIETSSIAPAIIESCPTRIFLPNERAAEPQIARVYER
FGLNDRQIEILSRATPKRDYYCQSRRGNRLFELGLGEVALAFTAASSKSDQIRIGELVAKHGTHAFAAHWLRHRGLYWAA
ALLPEPDPLTASIPSDELLLPLDPEELRS
>Mature_829_residues
MMNLSEYRSRATSLADFLPWVALVAPGVVLNKDGSFQRTARFRGPDLDSATPAELVSVTARLNNALRRLGSGWAVFVEAQ
RVPALDYPNSAFPDPVSALVDMERGEQFREAGSHFESGYYLTLLWMPPAEEAARAENWLYEGRSGGGVDPHEQLAGFIDR
TNRVLHLVEGFMPEVGWLDDAETLTYLHSCVSTRRQRVRVPETPCYLDALLTDEGLTGGLEPKLGEHHLRVATATGFPTA
TFPSLLDELNRLAFPYRWSTRAIMLDKTDATKLLTKIRRQWFAKRKSVAAILKEVMTNEASVLTDSDASNKAADADLALQ
ELGADHSGIAYVTATVTVWDRDPALAAEKLRLVEKIIQGRDFTATIEGMNAIEAWLGSLPGHVYANVRQPPISTLNLAHL
IPLSAVWAGAERDEHFGDAPLLYGKTEGSTPFRLSLHVGDVGHTLIVGPTGAGKSVLLALMAMQFRRYADNQIFAFDFGG
SIRAAAIACGGDWQDLGGALHDRDGGEGVTLQPLARIDDPGERAWAAEWLAAILSSEGVTVDPAAKEHLWTALGSLASAP
PPERTLTGLAVLLQSQELKQALAPYCVGGPWGRLLDAEAEHLGEASFQAFETEGLVGAASAAAVLAYLFHRIEGRLDGRP
TLIIIDEGWLVLDSPAFAAQLREWLKTLRKKNSSVIFATQSLADIETSSIAPAIIESCPTRIFLPNERAAEPQIARVYER
FGLNDRQIEILSRATPKRDYYCQSRRGNRLFELGLGEVALAFTAASSKSDQIRIGELVAKHGTHAFAAHWLRHRGLYWAA
ALLPEPDPLTASIPSDELLLPLDPEELRS

Specific function: Unknown

COG id: COG3451

COG function: function code U; Type IV secretory pathway, VirB4 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbE/virB4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004346
- InterPro:   IPR018145 [H]

Pfam domain/function: PF03135 CagE_TrbE_VirB [H]

EC number: NA

Molecular weight: Translated: 90535; Mature: 90535

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNLSEYRSRATSLADFLPWVALVAPGVVLNKDGSFQRTARFRGPDLDSATPAELVSVTA
CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHCCCCCCCCCCHHHHHHHHH
RLNNALRRLGSGWAVFVEAQRVPALDYPNSAFPDPVSALVDMERGEQFREAGSHFESGYY
HHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEE
LTLLWMPPAEEAARAENWLYEGRSGGGVDPHEQLAGFIDRTNRVLHLVEGFMPEVGWLDD
EEEEECCCHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AETLTYLHSCVSTRRQRVRVPETPCYLDALLTDEGLTGGLEPKLGEHHLRVATATGFPTA
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCH
TFPSLLDELNRLAFPYRWSTRAIMLDKTDATKLLTKIRRQWFAKRKSVAAILKEVMTNEA
HHHHHHHHHHHHCCCEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SVLTDSDASNKAADADLALQELGADHSGIAYVTATVTVWDRDPALAAEKLRLVEKIIQGR
CEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHCCC
DFTATIEGMNAIEAWLGSLPGHVYANVRQPPISTLNLAHLIPLSAVWAGAERDEHFGDAP
CCEEEECCHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
LLYGKTEGSTPFRLSLHVGDVGHTLIVGPTGAGKSVLLALMAMQFRRYADNQIFAFDFGG
EEEECCCCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCC
SIRAAAIACGGDWQDLGGALHDRDGGEGVTLQPLARIDDPGERAWAAEWLAAILSSEGVT
CCEEEEEEECCCHHHHCCCCCCCCCCCCCEECHHHHCCCCCHHHHHHHHHHHHHCCCCCE
VDPAAKEHLWTALGSLASAPPPERTLTGLAVLLQSQELKQALAPYCVGGPWGRLLDAEAE
ECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCHHHHHCHHHH
HLGEASFQAFETEGLVGAASAAAVLAYLFHRIEGRLDGRPTLIIIDEGWLVLDSPAFAAQ
HCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEECCHHHHH
LREWLKTLRKKNSSVIFATQSLADIETSSIAPAIIESCPTRIFLPNERAAEPQIARVYER
HHHHHHHHHCCCCCEEEEECCHHHCCHHCCCHHHHHHCCCEEECCCCCCCCHHHHHHHHH
FGLNDRQIEILSRATPKRDYYCQSRRGNRLFELGLGEVALAFTAASSKSDQIRIGELVAK
HCCCCCHHHHHHHCCCCCCCEECCCCCCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHH
HGTHAFAAHWLRHRGLYWAAALLPEPDPLTASIPSDELLLPLDPEELRS
CCCHHHHHHHHHHCCHHEEEECCCCCCCCEECCCCCCEEECCCHHHHCC
>Mature Secondary Structure
MMNLSEYRSRATSLADFLPWVALVAPGVVLNKDGSFQRTARFRGPDLDSATPAELVSVTA
CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHCCCCCCCCCCHHHHHHHHH
RLNNALRRLGSGWAVFVEAQRVPALDYPNSAFPDPVSALVDMERGEQFREAGSHFESGYY
HHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEE
LTLLWMPPAEEAARAENWLYEGRSGGGVDPHEQLAGFIDRTNRVLHLVEGFMPEVGWLDD
EEEEECCCHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AETLTYLHSCVSTRRQRVRVPETPCYLDALLTDEGLTGGLEPKLGEHHLRVATATGFPTA
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCH
TFPSLLDELNRLAFPYRWSTRAIMLDKTDATKLLTKIRRQWFAKRKSVAAILKEVMTNEA
HHHHHHHHHHHHCCCEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SVLTDSDASNKAADADLALQELGADHSGIAYVTATVTVWDRDPALAAEKLRLVEKIIQGR
CEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHCCC
DFTATIEGMNAIEAWLGSLPGHVYANVRQPPISTLNLAHLIPLSAVWAGAERDEHFGDAP
CCEEEECCHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
LLYGKTEGSTPFRLSLHVGDVGHTLIVGPTGAGKSVLLALMAMQFRRYADNQIFAFDFGG
EEEECCCCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCC
SIRAAAIACGGDWQDLGGALHDRDGGEGVTLQPLARIDDPGERAWAAEWLAAILSSEGVT
CCEEEEEEECCCHHHHCCCCCCCCCCCCCEECHHHHCCCCCHHHHHHHHHHHHHCCCCCE
VDPAAKEHLWTALGSLASAPPPERTLTGLAVLLQSQELKQALAPYCVGGPWGRLLDAEAE
ECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCHHHHHCHHHH
HLGEASFQAFETEGLVGAASAAAVLAYLFHRIEGRLDGRPTLIIIDEGWLVLDSPAFAAQ
HCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEECCHHHHH
LREWLKTLRKKNSSVIFATQSLADIETSSIAPAIIESCPTRIFLPNERAAEPQIARVYER
HHHHHHHHHCCCCCEEEEECCHHHCCHHCCCHHHHHHCCCEEECCCCCCCCHHHHHHHHH
FGLNDRQIEILSRATPKRDYYCQSRRGNRLFELGLGEVALAFTAASSKSDQIRIGELVAK
HCCCCCHHHHHHHCCCCCCCEECCCCCCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHH
HGTHAFAAHWLRHRGLYWAAALLPEPDPLTASIPSDELLLPLDPEELRS
CCCHHHHHHHHHHCCHHEEEECCCCCCCCEECCCCCCEEECCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]