| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487983
Identifier: 103487983
GI number: 103487983
Start: 2639870
End: 2640478
Strand: Reverse
Name: 103487983
Synonym: Sala_2504
Alternate gene names: NA
Gene position: 2640478-2639870 (Counterclockwise)
Preceding gene: 103487984
Following gene: 103487982
Centisome position: 78.93
GC content: 66.17
Gene sequence:
>609_bases ATGGTTGAACGAAAGACATGGGCGTGGCTCGCCGCCGGTGCGGTCGTCGTCGGCGCGGGTGCCTTCGCGCAAAGCGGCGT GGGGGACCGCGGCAGGGGGGATGCGCGTCCGATGGTGCAACTGCCCCCGGCAGCGGTCGTCCCGGCCAGCTCCGCGGCGT CGGCCCCGACGGCGTTGTCGCCTGCCAGCCTGACCACGACAGTGGGCGGCTATACCTACGACTGGACCGCGCTGCAGGCG GCCATCGATGCCGACGCCGAAGTCGCGAACGGCTATTTCATCGTCGGTAACGCCACCGACCCCGACTATCTGTTTGCATA TGAGAAGGGCAGCTTCGGAATCGATCGGGTGACGCCACTCGCCTCGGCCACCAAATGGTTCGCAGGAACGCTCGCCATGC GGATGGCGCAGGCGGGGATTGTCACGCTGGACGACCCGATGCGGCCGCCGCTCGCCTTCTGGACGACGACCGGGACAAAG AAGGACGTCAAGCTGAAGCATGCGCTGTCGATGACGTCGGGGTTCAACGGCAGCCCGCTGGTCGGAGGGTGCCAGCTGAC ACCGGCGCTGATCCTGTACAATTGCGCGAAAAATATCCACGACCTGTGA
Upstream 100 bases:
>100_bases GGGGTCGAAGGACGTATCTCCTTCTGATCCGGCGGCCGCCGCGCCGCGTTCAGCGGCGCCTCCTTTCGAAACGTGCAACG AAGAGGATGGGAGAGACGAT
Downstream 100 bases:
>100_bases TACGACATCCTGCGTCCCGGCAACGCGCCGGGTGCGCAATATAGCTATGGCCCGCACGGGATGCAGGTCGCCGCCGCCTA TCTCGAGGCGAAGGATGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MVERKTWAWLAAGAVVVGAGAFAQSGVGDRGRGDARPMVQLPPAAVVPASSAASAPTALSPASLTTTVGGYTYDWTALQA AIDADAEVANGYFIVGNATDPDYLFAYEKGSFGIDRVTPLASATKWFAGTLAMRMAQAGIVTLDDPMRPPLAFWTTTGTK KDVKLKHALSMTSGFNGSPLVGGCQLTPALILYNCAKNIHDL
Sequences:
>Translated_202_residues MVERKTWAWLAAGAVVVGAGAFAQSGVGDRGRGDARPMVQLPPAAVVPASSAASAPTALSPASLTTTVGGYTYDWTALQA AIDADAEVANGYFIVGNATDPDYLFAYEKGSFGIDRVTPLASATKWFAGTLAMRMAQAGIVTLDDPMRPPLAFWTTTGTK KDVKLKHALSMTSGFNGSPLVGGCQLTPALILYNCAKNIHDL >Mature_202_residues MVERKTWAWLAAGAVVVGAGAFAQSGVGDRGRGDARPMVQLPPAAVVPASSAASAPTALSPASLTTTVGGYTYDWTALQA AIDADAEVANGYFIVGNATDPDYLFAYEKGSFGIDRVTPLASATKWFAGTLAMRMAQAGIVTLDDPMRPPLAFWTTTGTK KDVKLKHALSMTSGFNGSPLVGGCQLTPALILYNCAKNIHDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21012; Mature: 21012
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVERKTWAWLAAGAVVVGAGAFAQSGVGDRGRGDARPMVQLPPAAVVPASSAASAPTALS CCCCCCHHHHHHCEEEEECCHHHHCCCCCCCCCCCCCEEECCCCEEECCCCCCCCCCCCC PASLTTTVGGYTYDWTALQAAIDADAEVANGYFIVGNATDPDYLFAYEKGSFGIDRVTPL CCCCEEECCCEEECHHHHHHHHCCCCEECCCEEEEECCCCCCEEEEECCCCCCCCHHCHH ASATKWFAGTLAMRMAQAGIVTLDDPMRPPLAFWTTTGTKKDVKLKHALSMTSGFNGSPL HHHHHHHHHHHHHHHHHCCEEEECCCCCCCEEEEECCCCCCCEEHHHHHHHHCCCCCCCC VGGCQLTPALILYNCAKNIHDL CCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVERKTWAWLAAGAVVVGAGAFAQSGVGDRGRGDARPMVQLPPAAVVPASSAASAPTALS CCCCCCHHHHHHCEEEEECCHHHHCCCCCCCCCCCCCEEECCCCEEECCCCCCCCCCCCC PASLTTTVGGYTYDWTALQAAIDADAEVANGYFIVGNATDPDYLFAYEKGSFGIDRVTPL CCCCEEECCCEEECHHHHHHHHCCCCEECCCEEEEECCCCCCEEEEECCCCCCCCHHCHH ASATKWFAGTLAMRMAQAGIVTLDDPMRPPLAFWTTTGTKKDVKLKHALSMTSGFNGSPL HHHHHHHHHHHHHHHHHCCEEEECCCCCCCEEEEECCCCCCCEEHHHHHHHHCCCCCCCC VGGCQLTPALILYNCAKNIHDL CCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA