| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
Click here to switch to the map view.
The map label for this gene is 103487647
Identifier: 103487647
GI number: 103487647
Start: 2276262
End: 2276657
Strand: Direct
Name: 103487647
Synonym: Sala_2166
Alternate gene names: NA
Gene position: 2276262-2276657 (Clockwise)
Preceding gene: 103487645
Following gene: 103487648
Centisome position: 68.05
GC content: 64.65
Gene sequence:
>396_bases GTGACGCACCCCTTCATCGAACATGTAAACCTGACCGTCAGCGATCCCGACCGCACCGCCGGCATCCTGTCGGCGATCTT CGGCTGGCACGAACGCTGGCGCGGCCCGGCGCGCGATGGTGGGCGCACGATCCACCTCGGCAGCGACACGGCCTATATCG CGCTCTACACCGGCCCCGACGACGAACGCGAAAGCGCCCGCTACCCGAAGGGCGAACCGCTCAATCATGTCGGGGTGCAG GTCGACGACCTCGACACCATCGAAATGCGCGTGAAGGCGGTCGGCCTTGCCCCCTTCAATCATGGCGATTACGAGCCCGG TCGTCGCTTCTATTTCTTCGACCCCGACGGCATCGAATATGAAGTCGTCAGCTACGCCGAGCCGCGGCCACGTTGA
Upstream 100 bases:
>100_bases CAATGACGCACCTCGAAACGGATACGCCATTTCCTCTTGATCTGAACCTCACTTCAGCTTGCATAAGCGGCTGCGTCAAC CCGAATCAGGAGATATCCCC
Downstream 100 bases:
>100_bases GCCGGGCAACATCCACGTCGCTGCCGCGTTGATCGATCATCGAGGGGGCCGAAAGGAGCCTATCGATGAGCAACGATATC AAGCAGCAATTCTGGAAGGC
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Glyoxalase/Bleomycin Resistance Protein/Dioxygenase; Lactoylglutathione Lyase
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MTHPFIEHVNLTVSDPDRTAGILSAIFGWHERWRGPARDGGRTIHLGSDTAYIALYTGPDDERESARYPKGEPLNHVGVQ VDDLDTIEMRVKAVGLAPFNHGDYEPGRRFYFFDPDGIEYEVVSYAEPRPR
Sequences:
>Translated_131_residues MTHPFIEHVNLTVSDPDRTAGILSAIFGWHERWRGPARDGGRTIHLGSDTAYIALYTGPDDERESARYPKGEPLNHVGVQ VDDLDTIEMRVKAVGLAPFNHGDYEPGRRFYFFDPDGIEYEVVSYAEPRPR >Mature_130_residues THPFIEHVNLTVSDPDRTAGILSAIFGWHERWRGPARDGGRTIHLGSDTAYIALYTGPDDERESARYPKGEPLNHVGVQV DDLDTIEMRVKAVGLAPFNHGDYEPGRRFYFFDPDGIEYEVVSYAEPRPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14844; Mature: 14712
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHPFIEHVNLTVSDPDRTAGILSAIFGWHERWRGPARDGGRTIHLGSDTAYIALYTGPD CCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEEECCC DERESARYPKGEPLNHVGVQVDDLDTIEMRVKAVGLAPFNHGDYEPGRRFYFFDPDGIEY CCHHCCCCCCCCCCCCCCEEECCCCEEEEEEEEEEECCCCCCCCCCCCEEEEECCCCCEE EVVSYAEPRPR EEEECCCCCCC >Mature Secondary Structure THPFIEHVNLTVSDPDRTAGILSAIFGWHERWRGPARDGGRTIHLGSDTAYIALYTGPD CCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEEECCC DERESARYPKGEPLNHVGVQVDDLDTIEMRVKAVGLAPFNHGDYEPGRRFYFFDPDGIEY CCHHCCCCCCCCCCCCCCEEECCCCEEEEEEEEEEECCCCCCCCCCCCEEEEECCCCCEE EVVSYAEPRPR EEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA