Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487648

Identifier: 103487648

GI number: 103487648

Start: 2276723

End: 2277187

Strand: Direct

Name: 103487648

Synonym: Sala_2167

Alternate gene names: NA

Gene position: 2276723-2277187 (Clockwise)

Preceding gene: 103487647

Following gene: 103487649

Centisome position: 68.06

GC content: 63.87

Gene sequence:

>465_bases
ATGAGCAACGATATCAAGCAGCAATTCTGGAAGGCGCTGGCCGACAGCCCCAATCTGATGGTGGGTGCTACTGGCGAGCG
CGCGCATCACATCCCGATGCGGGCGCAGCTCGACAGGGACGCTGACAGCGCCTTCTGGTTCTTCACTGCGACCGACAATC
GCCTTGCGGGCGGCGGCCCGGCGATGGCGCAATTCGTGTCGAAGGACCATCGCCTTTTCGCGTGCATTTCGGGGACTCTG
CGCCGCGAAACCGACCGCGCGGCGCTCGACAAGCTGTGGAACAACGGCGTCGCCGCCTGGTATGAGGGCGGCAAGGACGA
CCCCAGGCTCCTGCTGCTGCGCTTCGACCTCGACGACGCTGAAATCTGGACCGCCGATCCGGGGATCAAGGGCTTGTTCA
AGCTGGCGACGGGAATGACGATGAAGGAAGGCGACCTTGGCGGACACGCCGAAGTGGCGCTTTAG

Upstream 100 bases:

>100_bases
AAGTCGTCAGCTACGCCGAGCCGCGGCCACGTTGAGCCGGGCAACATCCACGTCGCTGCCGCGTTGATCGATCATCGAGG
GGGCCGAAAGGAGCCTATCG

Downstream 100 bases:

>100_bases
CAGGCTGCGGAAAAACTCTTCCCGTTTGGGGCTCAGCGTGATTCAATTGCGGCGTTGAGCTTGGGGGGGTGCAGCATGCG
GGGGGACGACATTGGGACGG

Product: general stress protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MSNDIKQQFWKALADSPNLMVGATGERAHHIPMRAQLDRDADSAFWFFTATDNRLAGGGPAMAQFVSKDHRLFACISGTL
RRETDRAALDKLWNNGVAAWYEGGKDDPRLLLLRFDLDDAEIWTADPGIKGLFKLATGMTMKEGDLGGHAEVAL

Sequences:

>Translated_154_residues
MSNDIKQQFWKALADSPNLMVGATGERAHHIPMRAQLDRDADSAFWFFTATDNRLAGGGPAMAQFVSKDHRLFACISGTL
RRETDRAALDKLWNNGVAAWYEGGKDDPRLLLLRFDLDDAEIWTADPGIKGLFKLATGMTMKEGDLGGHAEVAL
>Mature_153_residues
SNDIKQQFWKALADSPNLMVGATGERAHHIPMRAQLDRDADSAFWFFTATDNRLAGGGPAMAQFVSKDHRLFACISGTLR
RETDRAALDKLWNNGVAAWYEGGKDDPRLLLLRFDLDDAEIWTADPGIKGLFKLATGMTMKEGDLGGHAEVAL

Specific function: Unknown

COG id: COG3871

COG function: function code R; Uncharacterized stress protein (general stress protein 26)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16979; Mature: 16848

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNDIKQQFWKALADSPNLMVGATGERAHHIPMRAQLDRDADSAFWFFTATDNRLAGGGP
CCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCH
AMAQFVSKDHRLFACISGTLRRETDRAALDKLWNNGVAAWYEGGKDDPRLLLLRFDLDDA
HHHHHHCCCCEEEEEECCHHHCCHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCC
EIWTADPGIKGLFKLATGMTMKEGDLGGHAEVAL
EEEECCCCHHHHHHHHCCCEEECCCCCCCEEEEC
>Mature Secondary Structure 
SNDIKQQFWKALADSPNLMVGATGERAHHIPMRAQLDRDADSAFWFFTATDNRLAGGGP
CCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCH
AMAQFVSKDHRLFACISGTLRRETDRAALDKLWNNGVAAWYEGGKDDPRLLLLRFDLDDA
HHHHHHCCCCEEEEEECCHHHCCHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCC
EIWTADPGIKGLFKLATGMTMKEGDLGGHAEVAL
EEEECCCCHHHHHHHHCCCEEECCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA