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The map label for this gene is bfrD [H]

Identifier: 103487572

GI number: 103487572

Start: 2196655

End: 2198862

Strand: Direct

Name: bfrD [H]

Synonym: Sala_2091

Alternate gene names: 103487572

Gene position: 2196655-2198862 (Clockwise)

Preceding gene: 103487571

Following gene: 103487574

Centisome position: 65.67

GC content: 62.73

Gene sequence:

>2208_bases
TTGCATGGCCGTCCTCTCGCCACCCATTTTTTTCGCACAATCGCGCAACAGTGTTGCAATTCGCTCGCATTAGCGTTAGC
GGCGCCGCGACGATCAGCGAATCCAACAGGGGGCCATGTGAAGAAACTGTTTTTGCTTACCGCTGCCGCGGCGACCTTTC
CGGCGACGGCGGTCGCCAGCGAGGCCGAGCGCGAGGATGCGCGCACCATTTTGGTGATCGGCAAGTCGGATGGCTATGTC
GCCACCAATTCGGTCACCGCGACCAAGACCGACACACCGCTGATCGATGTGCCACAGACGATTTCGGTGGTCACGCGCGA
GCGGCTGGACGATCAGGCGTCGCGTTCGATCGCCGACGTCCTGCGCTATGTCCCCGGTACCACCATCGGCCAGGGCGAGG
GCAATCGCGACCAGATCACCCTGCGCGGCCAGAACACGACCGCCGACTTCTTTCTCGACGGGGTGCGCGACGACGTCCAG
TATTTCCGCAGCCTGTATAACATCGAGCGGGTCGAGATACTGAAAGGCCCCTTTGCGATGATCTTTGGCCGCGGCGGCAG
CGGCGGCGTCATCAACCGGGTTCAGAAGACGCCATCGGCCGATGCGCTGGCAGTTGGCGGCACGGTCAGCGCCAACAGCT
TCGGCGCCTGGGACGTTTCGGCGGATGTCAATGCGCCCCTTGGTGGCGGTGCGGCGTTCCGGCTCAACGCAAATTACGAG
AGCCTCGACAATCATCGCGATTTCTTTGAAGGCGAACGTTATGCCATCAATCCCTATGTCGCGGCCGATCTGGGCCGCTG
GAAGCTCGGACTGTCCTACGAATATGTGAACGACGACCGCGTGACCGACCGCGGGGTGCCGTCGATCGCGACCGCGCCCG
GACGGCCGAACCGTCCGATCACGGGCTATCGCGACACTTTCTTTGGTGTGCCGGGCGTCAATCGCACGGGGCTGGAGGCC
CATATCGTCAAGGCGCGGATCGACGGCGAGCTGGCGGAGGCGCTGACATGGTCGACCACGCTGCTCTATGGCGACTATGA
CAAATATTATACCAACGTCTTTGCCAATGGCCCCGCCACGAGCCCGACCGGCACCGTCGCCTTGTCGAGCTATACCGATG
CGACCCGGCGTCAGAACTTTATCGCGCAGAGCAACCTGCTTTGGGACGTCGACCTGGGCGGGATCGACAACCGGATTCTG
TTCGGCCTCGAATATGGCGACCAGGATTCGACGAACCAGCGCCGCAACGGCACGCTGTCGAACGGCACCCTCGACCTCGC
CAACATCGTCTATCCGACGGTCAGTTTCGGCCCGCTGGTCCGCAACACCGATTCGCGCGTCCGGTTCTTCTCGGCCTATG
CCCAGGATCAGATTGCATTCGGATCGCATGTCGATCTGGTCCTTGGCGTGCGTTACGACCGGTTCGAGATCAAGGGCACC
GACCTGATCGGCGCCCCGCGTCCGTTCGCCCGTACCGACGAAAAACTGTCGCCGCGGATCGGCCTGATCCTCAAGCCACG
GGAAAATGTTTCGATCTACGGCAGCTACAGCCGCTCCTTCCTCCCGCGGTCGGGCGATCAGTTCCTGACCCTGGCGCCCG
CGTCGGGATCGTCCCCGGCGCAGGAGGATCTGACGCCCGAACGGATGATCAATTACGAAGTCGGCGCCAAATGGGACATC
CGGCCCGATCTCAATGTCACAGCGGCGCTGTTCCAGCTCGACCGCAACAACACCGCCGTGCCGGTCGCGGGCGTGCCGGG
ATCGCAATTCCTGACCGATACACGGACCAGGGGTGTCGAGCTGGCGCTGACCGGCCGGATTACGCCGAACTGGCAGGTGA
GCGGCGGCTACACCTGGCAGGACGCCCATCGCAAGAATGACGACAGCATCCGGCTCGGCCAGGTGCCCGAACATCAGTTC
GCGCTGTGGAACCGCTATGATTTCAACCGCAATGTCGGGATGGGTCTGGGCGTTGTCCATCAGTCGAGCCAGTTCGCCGC
GATTCGCACCGCGCCCACGACCACCCGGCTGCCCGCCTTCACGCGCGTCGATGCGGCGCTGTTCGTCAAGGCGAACGAGC
GGGTTGCATTTCAGGTCAATGTCGAAAATCTGTTCGACGAGCGCTATTTTTCGGACGCGCACAACCTCAACAACATCACG
CCGGGGGCGCCGATCAACGCCCGCTTCACGGCGCGCGTCAAATATTGA

Upstream 100 bases:

>100_bases
CGCGGCACCGCCTGAGCCATCTTCGCCCCACGTCCCGGCACGCGCGCGCCGGACCGCACATCATAGAGCGGCAGGCGGCT
CGTCCGACCGGCGGTGCGGA

Downstream 100 bases:

>100_bases
CCGGAATGCGGGAAGGCGGGCGGCCGTCTTCCCGCCCCGGTCGAAATCGCCGCCCGGCGCCCACCTCGCGCTCACGCGTT
ACGCAGCGGCGCCGGCTTCG

Product: TonB-dependent siderophore receptor

Products: NA

Alternate protein names: Virulence-associated outer membrane protein Vir-90 [H]

Number of amino acids: Translated: 735; Mature: 735

Protein sequence:

>735_residues
MHGRPLATHFFRTIAQQCCNSLALALAAPRRSANPTGGHVKKLFLLTAAAATFPATAVASEAEREDARTILVIGKSDGYV
ATNSVTATKTDTPLIDVPQTISVVTRERLDDQASRSIADVLRYVPGTTIGQGEGNRDQITLRGQNTTADFFLDGVRDDVQ
YFRSLYNIERVEILKGPFAMIFGRGGSGGVINRVQKTPSADALAVGGTVSANSFGAWDVSADVNAPLGGGAAFRLNANYE
SLDNHRDFFEGERYAINPYVAADLGRWKLGLSYEYVNDDRVTDRGVPSIATAPGRPNRPITGYRDTFFGVPGVNRTGLEA
HIVKARIDGELAEALTWSTTLLYGDYDKYYTNVFANGPATSPTGTVALSSYTDATRRQNFIAQSNLLWDVDLGGIDNRIL
FGLEYGDQDSTNQRRNGTLSNGTLDLANIVYPTVSFGPLVRNTDSRVRFFSAYAQDQIAFGSHVDLVLGVRYDRFEIKGT
DLIGAPRPFARTDEKLSPRIGLILKPRENVSIYGSYSRSFLPRSGDQFLTLAPASGSSPAQEDLTPERMINYEVGAKWDI
RPDLNVTAALFQLDRNNTAVPVAGVPGSQFLTDTRTRGVELALTGRITPNWQVSGGYTWQDAHRKNDDSIRLGQVPEHQF
ALWNRYDFNRNVGMGLGVVHQSSQFAAIRTAPTTTRLPAFTRVDAALFVKANERVAFQVNVENLFDERYFSDAHNLNNIT
PGAPINARFTARVKY

Sequences:

>Translated_735_residues
MHGRPLATHFFRTIAQQCCNSLALALAAPRRSANPTGGHVKKLFLLTAAAATFPATAVASEAEREDARTILVIGKSDGYV
ATNSVTATKTDTPLIDVPQTISVVTRERLDDQASRSIADVLRYVPGTTIGQGEGNRDQITLRGQNTTADFFLDGVRDDVQ
YFRSLYNIERVEILKGPFAMIFGRGGSGGVINRVQKTPSADALAVGGTVSANSFGAWDVSADVNAPLGGGAAFRLNANYE
SLDNHRDFFEGERYAINPYVAADLGRWKLGLSYEYVNDDRVTDRGVPSIATAPGRPNRPITGYRDTFFGVPGVNRTGLEA
HIVKARIDGELAEALTWSTTLLYGDYDKYYTNVFANGPATSPTGTVALSSYTDATRRQNFIAQSNLLWDVDLGGIDNRIL
FGLEYGDQDSTNQRRNGTLSNGTLDLANIVYPTVSFGPLVRNTDSRVRFFSAYAQDQIAFGSHVDLVLGVRYDRFEIKGT
DLIGAPRPFARTDEKLSPRIGLILKPRENVSIYGSYSRSFLPRSGDQFLTLAPASGSSPAQEDLTPERMINYEVGAKWDI
RPDLNVTAALFQLDRNNTAVPVAGVPGSQFLTDTRTRGVELALTGRITPNWQVSGGYTWQDAHRKNDDSIRLGQVPEHQF
ALWNRYDFNRNVGMGLGVVHQSSQFAAIRTAPTTTRLPAFTRVDAALFVKANERVAFQVNVENLFDERYFSDAHNLNNIT
PGAPINARFTARVKY
>Mature_735_residues
MHGRPLATHFFRTIAQQCCNSLALALAAPRRSANPTGGHVKKLFLLTAAAATFPATAVASEAEREDARTILVIGKSDGYV
ATNSVTATKTDTPLIDVPQTISVVTRERLDDQASRSIADVLRYVPGTTIGQGEGNRDQITLRGQNTTADFFLDGVRDDVQ
YFRSLYNIERVEILKGPFAMIFGRGGSGGVINRVQKTPSADALAVGGTVSANSFGAWDVSADVNAPLGGGAAFRLNANYE
SLDNHRDFFEGERYAINPYVAADLGRWKLGLSYEYVNDDRVTDRGVPSIATAPGRPNRPITGYRDTFFGVPGVNRTGLEA
HIVKARIDGELAEALTWSTTLLYGDYDKYYTNVFANGPATSPTGTVALSSYTDATRRQNFIAQSNLLWDVDLGGIDNRIL
FGLEYGDQDSTNQRRNGTLSNGTLDLANIVYPTVSFGPLVRNTDSRVRFFSAYAQDQIAFGSHVDLVLGVRYDRFEIKGT
DLIGAPRPFARTDEKLSPRIGLILKPRENVSIYGSYSRSFLPRSGDQFLTLAPASGSSPAQEDLTPERMINYEVGAKWDI
RPDLNVTAALFQLDRNNTAVPVAGVPGSQFLTDTRTRGVELALTGRITPNWQVSGGYTWQDAHRKNDDSIRLGQVPEHQF
ALWNRYDFNRNVGMGLGVVHQSSQFAAIRTAPTTTRLPAFTRVDAALFVKANERVAFQVNVENLFDERYFSDAHNLNNIT
PGAPINARFTARVKY

Specific function: Probably involved in iron transport [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1787024, Length=768, Percent_Identity=28.125, Blast_Score=216, Evalue=3e-57,
Organism=Escherichia coli, GI1786344, Length=775, Percent_Identity=25.9354838709677, Blast_Score=145, Evalue=9e-36,
Organism=Escherichia coli, GI1787344, Length=747, Percent_Identity=24.2302543507363, Blast_Score=139, Evalue=6e-34,
Organism=Escherichia coli, GI1788478, Length=169, Percent_Identity=28.4023668639053, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1790405, Length=194, Percent_Identity=30.9278350515464, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 80560; Mature: 80560

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHGRPLATHFFRTIAQQCCNSLALALAAPRRSANPTGGHVKKLFLLTAAAATFPATAVAS
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHH
EAEREDARTILVIGKSDGYVATNSVTATKTDTPLIDVPQTISVVTRERLDDQASRSIADV
HHHCCCCCEEEEEECCCCEEEECCEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHH
LRYVPGTTIGQGEGNRDQITLRGQNTTADFFLDGVRDDVQYFRSLYNIERVEILKGPFAM
HHHCCCCEECCCCCCCCEEEEECCCCCHHHEEHHHHHHHHHHHHHHCCCEEEEECCCEEE
IFGRGGSGGVINRVQKTPSADALAVGGTVSANSFGAWDVSADVNAPLGGGAAFRLNANYE
EEECCCCCCHHHHHHCCCCCCEEEECCEECCCCCCCEEECCCCCCCCCCCEEEEEECCHH
SLDNHRDFFEGERYAINPYVAADLGRWKLGLSYEYVNDDRVTDRGVPSIATAPGRPNRPI
HHCCCHHHHCCCCEEECCEEEECCCCEEEEEEEEECCCCCCCCCCCCCEECCCCCCCCCC
TGYRDTFFGVPGVNRTGLEAHIVKARIDGELAEALTWSTTLLYGDYDKYYTNVFANGPAT
CCCCHHCCCCCCCCCCCCEEEEEEEECCCHHHHHHEEEEEEEEECCHHHEEEEEECCCCC
SPTGTVALSSYTDATRRQNFIAQSNLLWDVDLGGIDNRILFGLEYGDQDSTNQRRNGTLS
CCCCEEEEECCCCHHHHHHHHHHCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCC
NGTLDLANIVYPTVSFGPLVRNTDSRVRFFSAYAQDQIAFGSHVDLVLGVRYDRFEIKGT
CCCEEEHHHHCCCCCCCCEECCCCCCEEEEEHHCCCCCCCCCCEEEEEEEEEEEEEECCC
DLIGAPRPFARTDEKLSPRIGLILKPRENVSIYGSYSRSFLPRSGDQFLTLAPASGSSPA
CCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCC
QEDLTPERMINYEVGAKWDIRPDLNVTAALFQLDRNNTAVPVAGVPGSQFLTDTRTRGVE
HHCCCHHHEEEEECCCEEECCCCCCEEEEEEEECCCCCEEEEECCCCCHHHHHCCCCCEE
LALTGRITPNWQVSGGYTWQDAHRKNDDSIRLGQVPEHQFALWNRYDFNRNVGMGLGVVH
EEEEECCCCCEEECCCEEECHHCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCEEEEE
QSSQFAAIRTAPTTTRLPAFTRVDAALFVKANERVAFQVNVENLFDERYFSDAHNLNNIT
CCCCEEEEEECCCCCCCCCCEECCEEEEEEECCEEEEEEEHHHHHHHHHHHHHCCCCCCC
PGAPINARFTARVKY
CCCCCCCEEEEEECC
>Mature Secondary Structure
MHGRPLATHFFRTIAQQCCNSLALALAAPRRSANPTGGHVKKLFLLTAAAATFPATAVAS
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHH
EAEREDARTILVIGKSDGYVATNSVTATKTDTPLIDVPQTISVVTRERLDDQASRSIADV
HHHCCCCCEEEEEECCCCEEEECCEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHH
LRYVPGTTIGQGEGNRDQITLRGQNTTADFFLDGVRDDVQYFRSLYNIERVEILKGPFAM
HHHCCCCEECCCCCCCCEEEEECCCCCHHHEEHHHHHHHHHHHHHHCCCEEEEECCCEEE
IFGRGGSGGVINRVQKTPSADALAVGGTVSANSFGAWDVSADVNAPLGGGAAFRLNANYE
EEECCCCCCHHHHHHCCCCCCEEEECCEECCCCCCCEEECCCCCCCCCCCEEEEEECCHH
SLDNHRDFFEGERYAINPYVAADLGRWKLGLSYEYVNDDRVTDRGVPSIATAPGRPNRPI
HHCCCHHHHCCCCEEECCEEEECCCCEEEEEEEEECCCCCCCCCCCCCEECCCCCCCCCC
TGYRDTFFGVPGVNRTGLEAHIVKARIDGELAEALTWSTTLLYGDYDKYYTNVFANGPAT
CCCCHHCCCCCCCCCCCCEEEEEEEECCCHHHHHHEEEEEEEEECCHHHEEEEEECCCCC
SPTGTVALSSYTDATRRQNFIAQSNLLWDVDLGGIDNRILFGLEYGDQDSTNQRRNGTLS
CCCCEEEEECCCCHHHHHHHHHHCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCC
NGTLDLANIVYPTVSFGPLVRNTDSRVRFFSAYAQDQIAFGSHVDLVLGVRYDRFEIKGT
CCCEEEHHHHCCCCCCCCEECCCCCCEEEEEHHCCCCCCCCCCEEEEEEEEEEEEEECCC
DLIGAPRPFARTDEKLSPRIGLILKPRENVSIYGSYSRSFLPRSGDQFLTLAPASGSSPA
CCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCC
QEDLTPERMINYEVGAKWDIRPDLNVTAALFQLDRNNTAVPVAGVPGSQFLTDTRTRGVE
HHCCCHHHEEEEECCCEEECCCCCCEEEEEEEECCCCCEEEEECCCCCHHHHHCCCCCEE
LALTGRITPNWQVSGGYTWQDAHRKNDDSIRLGQVPEHQFALWNRYDFNRNVGMGLGVVH
EEEEECCCCCEEECCCEEECHHCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCEEEEE
QSSQFAAIRTAPTTTRLPAFTRVDAALFVKANERVAFQVNVENLFDERYFSDAHNLNNIT
CCCCEEEEEECCCCCCCCCCEECCEEEEEEECCEEEEEEEHHHHHHHHHHHHHCCCCCCC
PGAPINARFTARVKY
CCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12910271; 10079522 [H]