Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487574

Identifier: 103487574

GI number: 103487574

Start: 2199964

End: 2200236

Strand: Direct

Name: 103487574

Synonym: Sala_2093

Alternate gene names: NA

Gene position: 2199964-2200236 (Clockwise)

Preceding gene: 103487572

Following gene: 103487577

Centisome position: 65.77

GC content: 74.36

Gene sequence:

>273_bases
ATGGCCTCGCGCGCCGAAAAGCCCGTCACCGTCACCCTCGGCCCGCTCACCCGCGCCGCGCAGGATCGCGTCAAATCGGG
CCGCTACGCCTCGGTCAGCGAGGTCGTCCGCGCGGGCCTGCGCGCGCTCGAGCGCGAGGAAGCGCTGCTCGACGAACTGC
TCAAGGTCCGCGTTGCCGAAGCCCTCGCCGACCCTCGCCCCGTCCAGCCCGCCGAAGACGTCCGCACCGCCCTCGCCGCC
CGCCACGCCAAGCGGACGGGCAAGCCCGCTTGA

Upstream 100 bases:

>100_bases
AACAGACTGGCGGAGAAACGCCCCTCGACCGAGGGGGACGAAGCGCGAAATTGACCCACCTTCCGTCCCCATGATATGAC
ATTGTCATAGGAGAACGCCC

Downstream 100 bases:

>100_bases
CCAAGCCGCTCCGCACCGTCTGGCGCCAGACCGCAACCGACGACCTCTACCGCCTCTACGACTGATACCGCCTCTACGAC
TGGATCGCCGACCACGCCGA

Product: CopG/Arc/MetJ family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 89

Protein sequence:

>90_residues
MASRAEKPVTVTLGPLTRAAQDRVKSGRYASVSEVVRAGLRALEREEALLDELLKVRVAEALADPRPVQPAEDVRTALAA
RHAKRTGKPA

Sequences:

>Translated_90_residues
MASRAEKPVTVTLGPLTRAAQDRVKSGRYASVSEVVRAGLRALEREEALLDELLKVRVAEALADPRPVQPAEDVRTALAA
RHAKRTGKPA
>Mature_89_residues
ASRAEKPVTVTLGPLTRAAQDRVKSGRYASVSEVVRAGLRALEREEALLDELLKVRVAEALADPRPVQPAEDVRTALAAR
HAKRTGKPA

Specific function: Unknown

COG id: COG3609

COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9710; Mature: 9579

Theoretical pI: Translated: 10.92; Mature: 10.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASRAEKPVTVTLGPLTRAAQDRVKSGRYASVSEVVRAGLRALEREEALLDELLKVRVAE
CCCCCCCCEEEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALADPRPVQPAEDVRTALAARHAKRTGKPA
HHCCCCCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ASRAEKPVTVTLGPLTRAAQDRVKSGRYASVSEVVRAGLRALEREEALLDELLKVRVAE
CCCCCCCEEEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALADPRPVQPAEDVRTALAARHAKRTGKPA
HHCCCCCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA