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The map label for this gene is 103487568

Identifier: 103487568

GI number: 103487568

Start: 2192584

End: 2192916

Strand: Direct

Name: 103487568

Synonym: Sala_2087

Alternate gene names: NA

Gene position: 2192584-2192916 (Clockwise)

Preceding gene: 103487567

Following gene: 103487570

Centisome position: 65.54

GC content: 66.37

Gene sequence:

>333_bases
ATGACACGGACGGCCAAGGATAAGGGCTATCGCAGCGAGATCGCGGGCGCGATCCATGAGATGATCAGCGACGCGCATGA
CGCGGGCGTCGTGTCGCGCACGACTTTGCGCAGCTTTGACGAAGCGTGCCTTGCCCCGGCGCCGACGCTGGCGGGCGACG
AAATCCGCGCGATCCGCGAGCGCGAGCATGTGTCGCAACCGGTGTTCGCCGCCTATCTCAACGTCTCGCGCAATCTGGTG
TCGGACTGGGAACGCGGCGTAAAGCGGCCGGGCGGCCCCGCCCTGCGGCTGCTCTCCATCATCCAGCGCAAGGGATTGCA
AGCCGTCGCATGA

Upstream 100 bases:

>100_bases
GATCTGGCGCTGCTGCGTGATGCGGCGGCCGAGGCGCTGGAATGGAGCGGCGCGCAACTGGACCGGCTGGTAGCGTCGGA
AACGCTGGTGGAGATTGAAA

Downstream 100 bases:

>100_bases
TCGCCCCTTACGGCGCCGTCCAGACATGAATGTTTACTTAACGCCCAAGTCACCCGTCGGATAGCCTCAAGAGCGCCGCC
CCCTCACCCACCCAAAACCT

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; Transcriptional Regulator; Cro/CI Family Transcriptional Regulator-Related Protein; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Transcriptional Regulator-Like Protein; Transcriptional Regulator-Like; Helix-Turn-Helix Family Protein; Helix-Turn-Helix Protein; Transcriptional Regulator Protein; HTH-Type Transcriptional Regulatory Protein

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MTRTAKDKGYRSEIAGAIHEMISDAHDAGVVSRTTLRSFDEACLAPAPTLAGDEIRAIREREHVSQPVFAAYLNVSRNLV
SDWERGVKRPGGPALRLLSIIQRKGLQAVA

Sequences:

>Translated_110_residues
MTRTAKDKGYRSEIAGAIHEMISDAHDAGVVSRTTLRSFDEACLAPAPTLAGDEIRAIREREHVSQPVFAAYLNVSRNLV
SDWERGVKRPGGPALRLLSIIQRKGLQAVA
>Mature_109_residues
TRTAKDKGYRSEIAGAIHEMISDAHDAGVVSRTTLRSFDEACLAPAPTLAGDEIRAIREREHVSQPVFAAYLNVSRNLVS
DWERGVKRPGGPALRLLSIIQRKGLQAVA

Specific function: Unknown

COG id: COG2944

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12010; Mature: 11879

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTAKDKGYRSEIAGAIHEMISDAHDAGVVSRTTLRSFDEACLAPAPTLAGDEIRAIRE
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
REHVSQPVFAAYLNVSRNLVSDWERGVKRPGGPALRLLSIIQRKGLQAVA
HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TRTAKDKGYRSEIAGAIHEMISDAHDAGVVSRTTLRSFDEACLAPAPTLAGDEIRAIRE
CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
REHVSQPVFAAYLNVSRNLVSDWERGVKRPGGPALRLLSIIQRKGLQAVA
HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA