Click here to switch to the map view.

The map label for this gene is groS2 [H]

Identifier: 103487559

GI number: 103487559

Start: 2183094

End: 2183408

Strand: Direct

Name: groS2 [H]

Synonym: Sala_2078

Alternate gene names: 103487559

Gene position: 2183094-2183408 (Clockwise)

Preceding gene: 103487556

Following gene: 103487560

Centisome position: 65.26

GC content: 63.81

Gene sequence:

>315_bases
ATGCATTTCCGTCCCTTGCACGACCGTGTGGTCGTCCGCCGCATCGAAGCCGAGGAGAAAAGCTCGGGCGGCATCATCAT
TCCCGACACCGCCAAGGAAAAGCCGCAGGAAGGCGAAGTCGTGGCCGTAGGTCCGGGCGCGCGCGCCGAGGACGGCACAG
TGACTGCACCCGATGTCAGGGTCGGCGACCGCGTCCTGTTCGGCAAATGGTCGGGCACCGAGGTCCGCATCGACGGCGAG
GATCTGCTCATCATGAAAGAGAGCGATATCCTGGGCGTTATCGAGCAGGCCGAAGCGCTCAAGAAGGCGGCGTGA

Upstream 100 bases:

>100_bases
CCCTCTTGAAGCACGAAAATCGCTTTCCTAGCTCGATCTCGCCGCCCGTCCGGGAGGCGGGCGGTTCGCATCATATCGTT
ATGCAAAAAGGAGGTTATGC

Downstream 100 bases:

>100_bases
CGGCCTTCGTTCCGCGAATATCGTGAAAGGAATCTGACAAGGAGGTATCCCAATGGCTGCCAAGGAAGTGAAATTTGCGT
CGGACGCGCGTGATCGCATG

Product: chaperonin Cpn10

Products: NA

Alternate protein names: GroES protein 2; Protein Cpn10 2 [H]

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MHFRPLHDRVVVRRIEAEEKSSGGIIIPDTAKEKPQEGEVVAVGPGARAEDGTVTAPDVRVGDRVLFGKWSGTEVRIDGE
DLLIMKESDILGVIEQAEALKKAA

Sequences:

>Translated_104_residues
MHFRPLHDRVVVRRIEAEEKSSGGIIIPDTAKEKPQEGEVVAVGPGARAEDGTVTAPDVRVGDRVLFGKWSGTEVRIDGE
DLLIMKESDILGVIEQAEALKKAA
>Mature_104_residues
MHFRPLHDRVVVRRIEAEEKSSGGIIIPDTAKEKPQEGEVVAVGPGARAEDGTVTAPDVRVGDRVLFGKWSGTEVRIDGE
DLLIMKESDILGVIEQAEALKKAA

Specific function: Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter [H]

COG id: COG0234

COG function: function code O; Co-chaperonin GroES (HSP10)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GroES chaperonin family [H]

Homologues:

Organism=Homo sapiens, GI4504523, Length=90, Percent_Identity=41.1111111111111, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1790585, Length=96, Percent_Identity=51.0416666666667, Blast_Score=94, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17555568, Length=92, Percent_Identity=44.5652173913043, Blast_Score=85, Evalue=7e-18,
Organism=Saccharomyces cerevisiae, GI6324594, Length=91, Percent_Identity=38.4615384615385, Blast_Score=75, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21356029, Length=94, Percent_Identity=43.6170212765958, Blast_Score=74, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21358317, Length=93, Percent_Identity=40.8602150537634, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: 980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 1274 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020818
- InterPro:   IPR018369
- InterPro:   IPR011032 [H]

Pfam domain/function: PF00166 Cpn10 [H]

EC number: NA

Molecular weight: Translated: 11259; Mature: 11259

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS00681 CHAPERONINS_CPN10

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFRPLHDRVVVRRIEAEEKSSGGIIIPDTAKEKPQEGEVVAVGPGARAEDGTVTAPDVR
CCCCCCCHHEEEEECCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCEEECCCCC
VGDRVLFGKWSGTEVRIDGEDLLIMKESDILGVIEQAEALKKAA
CCCEEEEECCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MHFRPLHDRVVVRRIEAEEKSSGGIIIPDTAKEKPQEGEVVAVGPGARAEDGTVTAPDVR
CCCCCCCHHEEEEECCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCEEECCCCC
VGDRVLFGKWSGTEVRIDGEDLLIMKESDILGVIEQAEALKKAA
CCCEEEEECCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]