| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
Click here to switch to the map view.
The map label for this gene is manX [H]
Identifier: 103487532
GI number: 103487532
Start: 2161742
End: 2162170
Strand: Direct
Name: manX [H]
Synonym: Sala_2051
Alternate gene names: 103487532
Gene position: 2161742-2162170 (Clockwise)
Preceding gene: 103487531
Following gene: 103487533
Centisome position: 64.62
GC content: 66.43
Gene sequence:
>429_bases ATGCCGAATGACAAGGCTCTGCCGCTCTTGGGAATGGTGCTCGTCACGCACGGCCGCCTCGCCGAGGAAATGGTGCGCGC GATGGAGCATGTCGTCGGCCCGCAGCGCGCCGTCGCCACCGTGTGCATCGGCCCCAACGACAATATGGAGATGCGGCGCC AGGAAATCGCCGACGCGATCCGCAGCGTCGACGAGGGACGCGGCGTCGTGATGCTGACCGACCTGTTCGGCGGCACCCCC TCGAACCTGGCGATCAGCCTGCTCGAAACCGGGCGGACCGAGGTGATCGCCGGGGTCAACCTGCCCATGCTGATCCGCCT CGAAAGCGCGCGCAAGTCGATGGAGCTGCGCGCCGCGGTGATCGCGGCCAAGGAAGCGGGGCAGAAATATATTTCGGTCG CGTCCGAAATGCTGGGAGTGGGACCGTGA
Upstream 100 bases:
>100_bases CCCACCGCAATCTTGACTCTGCCCCGCAAGATGGGCTTGAGGGCAAGCCCCCGTCCGCCGCCCGCGCATCGGGCGGCGCA AGATAAGGGTCGATCACTGC
Downstream 100 bases:
>100_bases ACGAGGTGTCCGAGACCGTCGAAATCACCAACCAGCGCGGGCTGCACGCGCGCGCGAGCGCCAAATTCGTCACCTTCGTC AGCCGCCTGCCCGAAACGGT
Product: PTS system fructose subfamily IIA component
Products: NA
Alternate protein names: EIIAB-Man; Mannose-specific phosphotransferase enzyme IIA component; EIII-Man; PTS system mannose-specific EIIA component; Mannose-specific phosphotransferase enzyme IIB component; PTS system mannose-specific EIIB component [H]
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MPNDKALPLLGMVLVTHGRLAEEMVRAMEHVVGPQRAVATVCIGPNDNMEMRRQEIADAIRSVDEGRGVVMLTDLFGGTP SNLAISLLETGRTEVIAGVNLPMLIRLESARKSMELRAAVIAAKEAGQKYISVASEMLGVGP
Sequences:
>Translated_142_residues MPNDKALPLLGMVLVTHGRLAEEMVRAMEHVVGPQRAVATVCIGPNDNMEMRRQEIADAIRSVDEGRGVVMLTDLFGGTP SNLAISLLETGRTEVIAGVNLPMLIRLESARKSMELRAAVIAAKEAGQKYISVASEMLGVGP >Mature_141_residues PNDKALPLLGMVLVTHGRLAEEMVRAMEHVVGPQRAVATVCIGPNDNMEMRRQEIADAIRSVDEGRGVVMLTDLFGGTPS NLAISLLETGRTEVIAGVNLPMLIRLESARKSMELRAAVIAAKEAGQKYISVASEMLGVGP
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG2893
COG function: function code G; Phosphotransferase system, mannose/fructose-specific component IIA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-4 domain [H]
Homologues:
Organism=Escherichia coli, GI1788120, Length=103, Percent_Identity=33.9805825242718, Blast_Score=65, Evalue=2e-12,
Paralogues:
None
Copy number: 220 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 260 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004701 - InterPro: IPR013789 - InterPro: IPR004720 - InterPro: IPR018455 [H]
Pfam domain/function: PF03610 EIIA-man; PF03830 PTSIIB_sorb [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 15193; Mature: 15062
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: PS51096 PTS_EIIA_TYPE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 6.4 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNDKALPLLGMVLVTHGRLAEEMVRAMEHVVGPQRAVATVCIGPNDNMEMRRQEIADAI CCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHEEEEEECCCCCHHHHHHHHHHHH RSVDEGRGVVMLTDLFGGTPSNLAISLLETGRTEVIAGVNLPMLIRLESARKSMELRAAV HHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCEEEEECCCCCEEEEEHHHHHHHHHHHHH IAAKEAGQKYISVASEMLGVGP HHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PNDKALPLLGMVLVTHGRLAEEMVRAMEHVVGPQRAVATVCIGPNDNMEMRRQEIADAI CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHEEEEEECCCCCHHHHHHHHHHHH RSVDEGRGVVMLTDLFGGTPSNLAISLLETGRTEVIAGVNLPMLIRLESARKSMELRAAV HHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCEEEEECCCCCEEEEEHHHHHHHHHHHHH IAAKEAGQKYISVASEMLGVGP HHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]