| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
Click here to switch to the map view.
The map label for this gene is mltA [H]
Identifier: 103487500
GI number: 103487500
Start: 2127244
End: 2128566
Strand: Direct
Name: mltA [H]
Synonym: Sala_2017
Alternate gene names: 103487500
Gene position: 2127244-2128566 (Clockwise)
Preceding gene: 103487499
Following gene: 103487501
Centisome position: 63.59
GC content: 70.52
Gene sequence:
>1323_bases ATGATCCGGCTTGCGGGGGCGCCACGCGCGCGTCTTTTCCGGCTCGCGCTGCTCGCCGCCTTCCCGCTCCTCTCGGGCTG CGTGTCGGTCATTCCCGGAGCGGGCGACACCGGTCGCCCGGCGGTGTCGGCGCCCGCCCCGTCGCCGGGTCAGCCTCGCC CCTATATTCCGCGTCCGTCCGAACGCGTCGGCGTGGCGGTCCAGCCGATCACCGCCACTCCGCGCGCACCGCTTGCCGCC CCCGCCGTTCCCGCCGACGCGGCCACAGCGACAGCCAGCGGTGTGATCGCCGGCCCCGACTTTGCATCGCTCGGTATCTC CACCGAACAGGCCGCGGCGGCGCTCGCCGCCTTTCGCATCAGCTGCCCCGCAATCCAGCGCCGCACCGACGCGAGCGGCC TGACGCAGACCGCCGACTGGACAGAAAGCTGCGCCGCTGCGGCCGGCTGGGCCGACGGCGACGCTTCAGCTTTCTTTGCG CGCTATTTCGGCACGGTGCAGATCGGCACTGGCGTGGCCTTCGTCACCGGCTATTACGAGCCCGAAATCGCCGCCTCGCG CACCAAACGGCCGGGATATGACGTTCCCATCTATCGCCGTCCCGCCGATCTGATCGAAGTCGATCTCGGCCAGTTCGCCG ACGATCTGAAGGGCCGCAAGATCCGCGGCCGCGTCGATGGCTCCAGTTTCGTGCGCTATCACGACCGCACCGCGATCGAA TCGGGCGCGCTCGAAGGGCGCGGTCTCGAACTGGCCTGGGCTGCCGACGCCGCCGAATTTTTCTTCCTTCAGGTACAGGG GTCGGGCCGCCTCCGCCTCCCCGACGGCGGCATCATGCGCATCGGATATGACGGCCAGAACGGCCGCGGCTATGTCGGCA TCGGCAAGTTGCTGCTCGACCGCGGCGAACTGGAGCGCGGGCAGGCATCGATGCAGGGCATTCTCGATTATCTGCGCGCC GATCCGGCGCGCGGCGCCGCGGTGATGAACGAGAACCCCAGCTGGGTCTTTTTCCGCGAACTCAACGGCCCCGGCCCCCT CGGCGCGCTCGGCGTGCCCGTCACGGCCCGCGTCAGCGTCGCCGCCGATCCCAAATATGTGCCGCTCGGCGCCCCCGTCT TCCTCTCGCTCGATCGCGCCGAACCGAACGGCCTCTGGATTGCGCAGGACACCGGCGGCGCGATCAAGGGGGCCAACCGC TTCGACAGCTTCTGGGGCGCGGGCGAAGAGGCGCGCGCGATCGCCGGCGGCATGGCGGCGCGCGGATCGGCGCTGCTGCT GCTGCCGCGCGCCAGCATCGCACGCCTGCTTCCCGAAGGCTGA
Upstream 100 bases:
>100_bases AGCGACGCCGCACAGACCGACGACCTGTGGACCTTCCGCCGCCAGATCGGCAGCAACGATCCCAACTGGCTGCTCGACGA AGCCGAATCGGCCTGACGCC
Downstream 100 bases:
>100_bases CCGGACGATGCCGCGGCGCCTCGCTCCCGAAGAAAGCGCGCTGTGGAAGAAGGTGGCGGCGACGGTGACGCCGCTACCGA ACGCGCCCTCGCCGCTCGCT
Product: MltA
Products: Muramic Acid Residue [C]
Alternate protein names: Murein hydrolase A [H]
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MIRLAGAPRARLFRLALLAAFPLLSGCVSVIPGAGDTGRPAVSAPAPSPGQPRPYIPRPSERVGVAVQPITATPRAPLAA PAVPADAATATASGVIAGPDFASLGISTEQAAAALAAFRISCPAIQRRTDASGLTQTADWTESCAAAAGWADGDASAFFA RYFGTVQIGTGVAFVTGYYEPEIAASRTKRPGYDVPIYRRPADLIEVDLGQFADDLKGRKIRGRVDGSSFVRYHDRTAIE SGALEGRGLELAWAADAAEFFFLQVQGSGRLRLPDGGIMRIGYDGQNGRGYVGIGKLLLDRGELERGQASMQGILDYLRA DPARGAAVMNENPSWVFFRELNGPGPLGALGVPVTARVSVAADPKYVPLGAPVFLSLDRAEPNGLWIAQDTGGAIKGANR FDSFWGAGEEARAIAGGMAARGSALLLLPRASIARLLPEG
Sequences:
>Translated_440_residues MIRLAGAPRARLFRLALLAAFPLLSGCVSVIPGAGDTGRPAVSAPAPSPGQPRPYIPRPSERVGVAVQPITATPRAPLAA PAVPADAATATASGVIAGPDFASLGISTEQAAAALAAFRISCPAIQRRTDASGLTQTADWTESCAAAAGWADGDASAFFA RYFGTVQIGTGVAFVTGYYEPEIAASRTKRPGYDVPIYRRPADLIEVDLGQFADDLKGRKIRGRVDGSSFVRYHDRTAIE SGALEGRGLELAWAADAAEFFFLQVQGSGRLRLPDGGIMRIGYDGQNGRGYVGIGKLLLDRGELERGQASMQGILDYLRA DPARGAAVMNENPSWVFFRELNGPGPLGALGVPVTARVSVAADPKYVPLGAPVFLSLDRAEPNGLWIAQDTGGAIKGANR FDSFWGAGEEARAIAGGMAARGSALLLLPRASIARLLPEG >Mature_440_residues MIRLAGAPRARLFRLALLAAFPLLSGCVSVIPGAGDTGRPAVSAPAPSPGQPRPYIPRPSERVGVAVQPITATPRAPLAA PAVPADAATATASGVIAGPDFASLGISTEQAAAALAAFRISCPAIQRRTDASGLTQTADWTESCAAAAGWADGDASAFFA RYFGTVQIGTGVAFVTGYYEPEIAASRTKRPGYDVPIYRRPADLIEVDLGQFADDLKGRKIRGRVDGSSFVRYHDRTAIE SGALEGRGLELAWAADAAEFFFLQVQGSGRLRLPDGGIMRIGYDGQNGRGYVGIGKLLLDRGELERGQASMQGILDYLRA DPARGAAVMNENPSWVFFRELNGPGPLGALGVPVTARVSVAADPKYVPLGAPVFLSLDRAEPNGLWIAQDTGGAIKGANR FDSFWGAGEEARAIAGGMAARGSALLLLPRASIARLLPEG
Specific function: Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. Degrades murein glycan strands and insoluble, high-molecular weight murein sacculi [H]
COG id: COG2821
COG function: function code M; Membrane-bound lytic murein transglycosylase
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789179, Length=276, Percent_Identity=32.6086956521739, Blast_Score=110, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010611 - InterPro: IPR014733 - InterPro: IPR005300 [H]
Pfam domain/function: PF06725 3D; PF03562 MltA [H]
EC number: 3.2.1.- [C]
Molecular weight: Translated: 45883; Mature: 45883
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRLAGAPRARLFRLALLAAFPLLSGCVSVIPGAGDTGRPAVSAPAPSPGQPRPYIPRPS CEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ERVGVAVQPITATPRAPLAAPAVPADAATATASGVIAGPDFASLGISTEQAAAALAAFRI HHCCEEEEECCCCCCCCCCCCCCCCCCCHHCCCCEEECCCHHHCCCCHHHHHHHHHHHHH SCPAIQRRTDASGLTQTADWTESCAAAAGWADGDASAFFARYFGTVQIGTGVAFVTGYYE CCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCEEEECCCEEEEEECCC PEIAASRTKRPGYDVPIYRRPADLIEVDLGQFADDLKGRKIRGRVDGSSFVRYHDRTAIE CCHHHHCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCHHHH SGALEGRGLELAWAADAAEFFFLQVQGSGRLRLPDGGIMRIGYDGQNGRGYVGIGKLLLD CCCCCCCCEEEEEECCCEEEEEEEEECCCEEECCCCCEEEEEECCCCCCEEEEHHHHHHC RGELERGQASMQGILDYLRADPARGAAVMNENPSWVFFRELNGPGPLGALGVPVTARVSV CCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEE AADPKYVPLGAPVFLSLDRAEPNGLWIAQDTGGAIKGANRFDSFWGAGEEARAIAGGMAA ECCCCEEECCCCEEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHCCCCHHHHHHCCCCC RGSALLLLPRASIARLLPEG CCCEEEEECCHHHHHHCCCC >Mature Secondary Structure MIRLAGAPRARLFRLALLAAFPLLSGCVSVIPGAGDTGRPAVSAPAPSPGQPRPYIPRPS CEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ERVGVAVQPITATPRAPLAAPAVPADAATATASGVIAGPDFASLGISTEQAAAALAAFRI HHCCEEEEECCCCCCCCCCCCCCCCCCCHHCCCCEEECCCHHHCCCCHHHHHHHHHHHHH SCPAIQRRTDASGLTQTADWTESCAAAAGWADGDASAFFARYFGTVQIGTGVAFVTGYYE CCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCEEEECCCEEEEEECCC PEIAASRTKRPGYDVPIYRRPADLIEVDLGQFADDLKGRKIRGRVDGSSFVRYHDRTAIE CCHHHHCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCHHHH SGALEGRGLELAWAADAAEFFFLQVQGSGRLRLPDGGIMRIGYDGQNGRGYVGIGKLLLD CCCCCCCCEEEEEECCCEEEEEEEEECCCEEECCCCCEEEEEECCCCCCEEEEHHHHHHC RGELERGQASMQGILDYLRADPARGAAVMNENPSWVFFRELNGPGPLGALGVPVTARVSV CCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEE AADPKYVPLGAPVFLSLDRAEPNGLWIAQDTGGAIKGANRFDSFWGAGEEARAIAGGMAA ECCCCEEECCCCEEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHCCCCHHHHHHCCCCC RGSALLLLPRASIARLLPEG CCCEEEEECCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic [C]
General reaction: Cleavage Bond [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]