Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487499

Identifier: 103487499

GI number: 103487499

Start: 2126574

End: 2127239

Strand: Direct

Name: 103487499

Synonym: Sala_2016

Alternate gene names: NA

Gene position: 2126574-2127239 (Clockwise)

Preceding gene: 103487492

Following gene: 103487500

Centisome position: 63.57

GC content: 65.32

Gene sequence:

>666_bases
GTGACCGCTTTTTCGATTGTCCTGCTCGCCATGATCGCCGCCTTCCTCGGAATGCGGCTTTACTCGGTGCTCGGCAAGCG
CACGGGGCATGAACAGGAGCCCGTGCTGCCGCGGCGCGACGATCGCTCCGCGCCGGCGCCGATCCGCCTCGACGATGGTG
AGACATCGGCGATCGTGACCTCGGCGACCGATACCGCCGGGCTCGTCTATGAGCCTTCGGCGGAGGCCGGCCTTCGCCAA
CTGCTTGCGAACGACCGCAATTTTGACGCGGGGCGGTTTATGGAGGGCGCCAGGGCGGCCTATCGCATGATCCTCGAGGC
CTTTTGGAAGGGCGACCGCGAGACGCTGCGCGATCTTTGCGACGACGACAGCTATGACGCCTTTGTCGAGGCGATCGACG
CGCGCGAGGCACGGGGCGAGACGCTGGAAAACCGCCTGATCAGGATCGATTCGGCAAAGATCACCGCGGCGGAGCTGAAT
CGCGGCGAAGCGCGCATCACCGTGCGCTATCACGCCGACATCAGTGCCATTACGCGCGACGCCGACGGCAAGCTGATTGC
CGGATCGATGAGCGACGCCGCACAGACCGACGACCTGTGGACCTTCCGCCGCCAGATCGGCAGCAACGATCCCAACTGGC
TGCTCGACGAAGCCGAATCGGCCTGA

Upstream 100 bases:

>100_bases
GACGCGCCGGGCGTCAGCGACCATGGCCATTTGAAACGCGACAACGTATCGCCTATGTATTGCGTGATATGTCGCCATTG
CTCGCATTGGACCCCTGCCC

Downstream 100 bases:

>100_bases
CGCCATGATCCGGCTTGCGGGGGCGCCACGCGCGCGTCTTTTCCGGCTCGCGCTGCTCGCCGCCTTCCCGCTCCTCTCGG
GCTGCGTGTCGGTCATTCCC

Product: import inner membrane translocase, subunit Tim44

Products: NA

Alternate protein names: Translocase Transmembrane Protein; Tim44-Like Domain-Containing Protein; Mitochondrial Import Inner Membrane Translocase; Tim44 Domain-Containing Protein; Mitochondrial Import Inner Membrane Translocase Subunit Tim; Transporter Protein; Tim44 Family Protein; Tim44-Like Domain Family; Membrane Translocase Subunit Tim; Import Inner Membrane Translocase; Import Inner Membrane Translocase Subunit; Membrane Associated Transporter Protein; Tim44-Like Domain Superfamily; Tim44-Like Domain Containing Protein; Tim44-Like Domain Protein

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MTAFSIVLLAMIAAFLGMRLYSVLGKRTGHEQEPVLPRRDDRSAPAPIRLDDGETSAIVTSATDTAGLVYEPSAEAGLRQ
LLANDRNFDAGRFMEGARAAYRMILEAFWKGDRETLRDLCDDDSYDAFVEAIDAREARGETLENRLIRIDSAKITAAELN
RGEARITVRYHADISAITRDADGKLIAGSMSDAAQTDDLWTFRRQIGSNDPNWLLDEAESA

Sequences:

>Translated_221_residues
MTAFSIVLLAMIAAFLGMRLYSVLGKRTGHEQEPVLPRRDDRSAPAPIRLDDGETSAIVTSATDTAGLVYEPSAEAGLRQ
LLANDRNFDAGRFMEGARAAYRMILEAFWKGDRETLRDLCDDDSYDAFVEAIDAREARGETLENRLIRIDSAKITAAELN
RGEARITVRYHADISAITRDADGKLIAGSMSDAAQTDDLWTFRRQIGSNDPNWLLDEAESA
>Mature_220_residues
TAFSIVLLAMIAAFLGMRLYSVLGKRTGHEQEPVLPRRDDRSAPAPIRLDDGETSAIVTSATDTAGLVYEPSAEAGLRQL
LANDRNFDAGRFMEGARAAYRMILEAFWKGDRETLRDLCDDDSYDAFVEAIDAREARGETLENRLIRIDSAKITAAELNR
GEARITVRYHADISAITRDADGKLIAGSMSDAAQTDDLWTFRRQIGSNDPNWLLDEAESA

Specific function: Unknown

COG id: COG4395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24431; Mature: 24299

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAFSIVLLAMIAAFLGMRLYSVLGKRTGHEQEPVLPRRDDRSAPAPIRLDDGETSAIVT
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEE
SATDTAGLVYEPSAEAGLRQLLANDRNFDAGRFMEGARAAYRMILEAFWKGDRETLRDLC
ECCCCCCEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
DDDSYDAFVEAIDAREARGETLENRLIRIDSAKITAAELNRGEARITVRYHADISAITRD
CCCCHHHHHHHHHHHHHCCHHHHHHEEEECCCEEEHHHCCCCCEEEEEEEECCHHHHHCC
ADGKLIAGSMSDAAQTDDLWTFRRQIGSNDPNWLLDEAESA
CCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCC
>Mature Secondary Structure 
TAFSIVLLAMIAAFLGMRLYSVLGKRTGHEQEPVLPRRDDRSAPAPIRLDDGETSAIVT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEE
SATDTAGLVYEPSAEAGLRQLLANDRNFDAGRFMEGARAAYRMILEAFWKGDRETLRDLC
ECCCCCCEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
DDDSYDAFVEAIDAREARGETLENRLIRIDSAKITAAELNRGEARITVRYHADISAITRD
CCCCHHHHHHHHHHHHHCCHHHHHHEEEECCCEEEHHHCCCCCEEEEEEEECCHHHHHCC
ADGKLIAGSMSDAAQTDDLWTFRRQIGSNDPNWLLDEAESA
CCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA