Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is cpg2 [H]
Identifier: 103487423
GI number: 103487423
Start: 2044332
End: 2045540
Strand: Direct
Name: cpg2 [H]
Synonym: Sala_1939
Alternate gene names: 103487423
Gene position: 2044332-2045540 (Clockwise)
Preceding gene: 103487421
Following gene: 103487424
Centisome position: 61.11
GC content: 67.74
Gene sequence:
>1209_bases ATGATCCAGTTGACTGCAACCGAACAGGCGACGCTCGACCGCGCGGCCGACGCACCGATGCTGGCGCAGGTCGAACGATG GGCCGCGATCAACAGCGGCACGGGCAATCTTGCGGGGCTGAAGACGGTCGCGGGGCAGCTTGCCGACGCCTTTGCCGCCT TACCCGGCGAACTGCGGCTCGTCGCGCCCGATCCGGTCGAGAGCGTCGATGCCGCGGGGCGCGTCAATATCGTCCAGCGC GGCGAGCACCTGCACCTTCGCGTACGGCCCGACGCGCCCGTGCAATTGCTGCTCACCGGGCACATGGACACGGTGTTCGC CGCCGACCATCCATTCCAGACACTGACCTGGCTGGAGGATGGCGTGCTCAACGGTCCCGGCACCGCCGACATGAAGGGCG GGATAGCGGTGATCCTCGCCGCGCTGACCGCGCTCGAAAGCTCGCCACTCGCGGATCGCGTCGGTTATGACGTGATGATC AACAGCGACGAGGAAACGGGCAGCCACGCCTCCGCGGCGCTGATCGCCGAACTGGCGCGTGGCAAGACCGCCGCGCTCAC CTACGAACCCGCGCTTCCGGACGGCACGCTCGCAGGGGCGCGGCCGGGCAGCGGCAATTTCAGCATCACCATCCATGGCC GCAGCGCCCACGCCGGGCGCAACCCGGAGGAGGGGCGCAACGCCCTGGTCGCCGCGGCCGATCTGGCGCTGCGACTGAAC GCGCTGAAATCGGGAGAGCTAAAAGTCAATCCGGCACGGATCGACGGTGGCGGCCCCAACAATGTCGTGCCCGATCAGGC GATCCTGCGCGTCAATATGCGTCCGTCGACCCCCGAAGCGATGGGCGGAGCGGAAAGCGCACTGCGCGCCGCAGTGGCTT CGGTATCAAGAGAGCATGACGTGCATTGCCATATCCACGGCGGTTTCAACCGCCCGCCCAAGCCGCTTGATGCCGCCGCA ACGCGGCTGTTCGAGCTGGTGCGGACATGCGGTGCGGCGCTGGGCATCGACATTGCGTGGAAAGCGACGGGCGGCGTGTG CGACGGCAACAACATCGCCGCCTGCGGCATCCCCGTGGTCGATACCATGGGTCCGCGCGGCGGCGCGATCCATTCGTCGG ACGAGTTTCTGATCACGGGCAGCCTCGCCGAACGCGCGCAGCTGTCGGCGCTGACCATGATGCGACTAGCGGAACGGGGG ACTGTGTGA
Upstream 100 bases:
>100_bases GCGCGGCTATCTTGCGGACCAGGGGTGATGAACCACAGCGCAGCGACAAAATCGCGGGCCGGGGGTGCCAAAGCCGCGCG GCGCTCGCTATAGCCGCTCC
Downstream 100 bases:
>100_bases ATCATGTGATCCGGGCGGCCAAACCGGGCGACCTGCAAAGCATTTACGAAATGGCGAAACTGACGGGCGGCGGTTTCACC AACCTGCCCCCCGACAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: CPDG2; Folate hydrolase G2; Glutamate carboxypeptidase; Pteroylmonoglutamic acid hydrolase G2; Glucarpidase [H]
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MIQLTATEQATLDRAADAPMLAQVERWAAINSGTGNLAGLKTVAGQLADAFAALPGELRLVAPDPVESVDAAGRVNIVQR GEHLHLRVRPDAPVQLLLTGHMDTVFAADHPFQTLTWLEDGVLNGPGTADMKGGIAVILAALTALESSPLADRVGYDVMI NSDEETGSHASAALIAELARGKTAALTYEPALPDGTLAGARPGSGNFSITIHGRSAHAGRNPEEGRNALVAAADLALRLN ALKSGELKVNPARIDGGGPNNVVPDQAILRVNMRPSTPEAMGGAESALRAAVASVSREHDVHCHIHGGFNRPPKPLDAAA TRLFELVRTCGAALGIDIAWKATGGVCDGNNIAACGIPVVDTMGPRGGAIHSSDEFLITGSLAERAQLSALTMMRLAERG TV
Sequences:
>Translated_402_residues MIQLTATEQATLDRAADAPMLAQVERWAAINSGTGNLAGLKTVAGQLADAFAALPGELRLVAPDPVESVDAAGRVNIVQR GEHLHLRVRPDAPVQLLLTGHMDTVFAADHPFQTLTWLEDGVLNGPGTADMKGGIAVILAALTALESSPLADRVGYDVMI NSDEETGSHASAALIAELARGKTAALTYEPALPDGTLAGARPGSGNFSITIHGRSAHAGRNPEEGRNALVAAADLALRLN ALKSGELKVNPARIDGGGPNNVVPDQAILRVNMRPSTPEAMGGAESALRAAVASVSREHDVHCHIHGGFNRPPKPLDAAA TRLFELVRTCGAALGIDIAWKATGGVCDGNNIAACGIPVVDTMGPRGGAIHSSDEFLITGSLAERAQLSALTMMRLAERG TV >Mature_402_residues MIQLTATEQATLDRAADAPMLAQVERWAAINSGTGNLAGLKTVAGQLADAFAALPGELRLVAPDPVESVDAAGRVNIVQR GEHLHLRVRPDAPVQLLLTGHMDTVFAADHPFQTLTWLEDGVLNGPGTADMKGGIAVILAALTALESSPLADRVGYDVMI NSDEETGSHASAALIAELARGKTAALTYEPALPDGTLAGARPGSGNFSITIHGRSAHAGRNPEEGRNALVAAADLALRLN ALKSGELKVNPARIDGGGPNNVVPDQAILRVNMRPSTPEAMGGAESALRAAVASVSREHDVHCHIHGGFNRPPKPLDAAA TRLFELVRTCGAALGIDIAWKATGGVCDGNNIAACGIPVVDTMGPRGGAIHSSDEFLITGSLAERAQLSALTMMRLAERG TV
Specific function: Catalyzes the hydrolysis of reduced and non-reduced folates to pteroates and L-glutamate. This enzyme has a broad specificity [H]
COG id: COG0624
COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001261 - InterPro: IPR017150 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: =3.4.17.11 [H]
Molecular weight: Translated: 41581; Mature: 41581
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: PS00758 ARGE_DAPE_CPG2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQLTATEQATLDRAADAPMLAQVERWAAINSGTGNLAGLKTVAGQLADAFAALPGELRL CEEEECCCHHHHHHHCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEE VAPDPVESVDAAGRVNIVQRGEHLHLRVRPDAPVQLLLTGHMDTVFAADHPFQTLTWLED ECCCCHHHHCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCEEEECCCCCHHHHHHHC GVLNGPGTADMKGGIAVILAALTALESSPLADRVGYDVMINSDEETGSHASAALIAELAR CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCEEEEECCCCCCCCHHHHHHHHHHHC GKTAALTYEPALPDGTLAGARPGSGNFSITIHGRSAHAGRNPEEGRNALVAAADLALRLN CCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCEEEEHHHHHHEEH ALKSGELKVNPARIDGGGPNNVVPDQAILRVNMRPSTPEAMGGAESALRAAVASVSREHD HCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCHHCCCHHHHHHHHHHHHCCCCC VHCHIHGGFNRPPKPLDAAATRLFELVRTCGAALGIDIAWKATGGVCDGNNIAACGIPVV EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEECCCCEEECCCCCE DTMGPRGGAIHSSDEFLITGSLAERAQLSALTMMRLAERGTV ECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIQLTATEQATLDRAADAPMLAQVERWAAINSGTGNLAGLKTVAGQLADAFAALPGELRL CEEEECCCHHHHHHHCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEE VAPDPVESVDAAGRVNIVQRGEHLHLRVRPDAPVQLLLTGHMDTVFAADHPFQTLTWLED ECCCCHHHHCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCEEEECCCCCHHHHHHHC GVLNGPGTADMKGGIAVILAALTALESSPLADRVGYDVMINSDEETGSHASAALIAELAR CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCEEEEECCCCCCCCHHHHHHHHHHHC GKTAALTYEPALPDGTLAGARPGSGNFSITIHGRSAHAGRNPEEGRNALVAAADLALRLN CCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCEEEEHHHHHHEEH ALKSGELKVNPARIDGGGPNNVVPDQAILRVNMRPSTPEAMGGAESALRAAVASVSREHD HCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCHHCCCHHHHHHHHHHHHCCCCC VHCHIHGGFNRPPKPLDAAATRLFELVRTCGAALGIDIAWKATGGVCDGNNIAACGIPVV EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEECCCCEEECCCCCE DTMGPRGGAIHSSDEFLITGSLAERAQLSALTMMRLAERGTV ECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6396165; 3838935; 9083113 [H]