Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is astA [H]
Identifier: 103487424
GI number: 103487424
Start: 2045546
End: 2046538
Strand: Direct
Name: astA [H]
Synonym: Sala_1940
Alternate gene names: 103487424
Gene position: 2045546-2046538 (Clockwise)
Preceding gene: 103487423
Following gene: 103487425
Centisome position: 61.15
GC content: 64.35
Gene sequence:
>993_bases GTGATCCGGGCGGCCAAACCGGGCGACCTGCAAAGCATTTACGAAATGGCGAAACTGACGGGCGGCGGTTTCACCAACCT GCCCCCCGACAAAAGGGCGCTGCGCGCCAAGCTCGAACGCGCCGAAGCGAGCTTTGCATCGGAAAAGGAATATCCCTCCG ACGAGCTGTATCTGATGGTGCTCGAGGATCTGGACAGCGGCGAGGTGCGCGGCACCTGCCAGATCTTCGGGCAGGTCGGC CAGCGCTGGCCCTTTTATAGCTATCGCATCGGCACCGACAGCAAGCATAGCGAACAGCTCGGTCGCACCTTTCACGCGCA GGTGCTGATGCTCAGCAACGATTTGAACGGCGCCAGCGAGGTCGGCGGGCTGTTCCTGCACCCGGCGGCGCGCGCCGGCG GGCTGGGCCTGCTGCTCGCGCGCTCGCGCTATCTGTTCATCGCGCGCCACCGCGCGCGTTTCGCCGATCGCATCCTGGCC GAGCTGCGCGGCGTGATCGACGAGGCCGGCGGCTCGCCTTTCTGGGACGGAGTCGCGGGCAAGTTTTTCGGCATGAGCTT TCAGGAAGCCGACCAGTTCAACGCGGTCCACGGCAACCAGTTCATCGCCGACCTGATGCCCAAGCATCCGGTCTATATCG CGATGCTGCCCGAAACCGCGCGCGCAGTGATCGGCGTCCCCCACCCAACGGGACGCGCCGCGATGCGGATGCTGGAAAAT GAAGGTTTCGCCTTTGAAAATTACATCGACATCTTCGACGGCGGCCCGACGATGACCGCGCGCACCGATCAGGTGGCGAG CATCCGCGACGCAAAGCATGTCGAGGTGACGGGCATCGCCGAAGATGGCGAGGATGCGCTGATCGCAACAGGGCGGCTCG CCGATTTCCGCTGCTGTTTCGGCAAGGTCGATGCCGAGGGCCGGATCGACGCCGACGCCGCGCGGATATTGAATGTCGGC AAGGGCGACGCAATCAGCTGGATCGGACGTTAG
Upstream 100 bases:
>100_bases CGTCGGACGAGTTTCTGATCACGGGCAGCCTCGCCGAACGCGCGCAGCTGTCGGCGCTGACCATGATGCGACTAGCGGAA CGGGGGACTGTGTGAATCAT
Downstream 100 bases:
>100_bases GATGCTGACCGAAATCAATTTCGACGGGATCATCGGCCCGACACACAATTATGCGGGACTGAGCCGCGGCAACATCGCGT CGGCGAGCCACGCCGGCGAC
Product: arginine N-succinyltransferase
Products: NA
Alternate protein names: AST; AOST [H]
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MIRAAKPGDLQSIYEMAKLTGGGFTNLPPDKRALRAKLERAEASFASEKEYPSDELYLMVLEDLDSGEVRGTCQIFGQVG QRWPFYSYRIGTDSKHSEQLGRTFHAQVLMLSNDLNGASEVGGLFLHPAARAGGLGLLLARSRYLFIARHRARFADRILA ELRGVIDEAGGSPFWDGVAGKFFGMSFQEADQFNAVHGNQFIADLMPKHPVYIAMLPETARAVIGVPHPTGRAAMRMLEN EGFAFENYIDIFDGGPTMTARTDQVASIRDAKHVEVTGIAEDGEDALIATGRLADFRCCFGKVDAEGRIDADAARILNVG KGDAISWIGR
Sequences:
>Translated_330_residues MIRAAKPGDLQSIYEMAKLTGGGFTNLPPDKRALRAKLERAEASFASEKEYPSDELYLMVLEDLDSGEVRGTCQIFGQVG QRWPFYSYRIGTDSKHSEQLGRTFHAQVLMLSNDLNGASEVGGLFLHPAARAGGLGLLLARSRYLFIARHRARFADRILA ELRGVIDEAGGSPFWDGVAGKFFGMSFQEADQFNAVHGNQFIADLMPKHPVYIAMLPETARAVIGVPHPTGRAAMRMLEN EGFAFENYIDIFDGGPTMTARTDQVASIRDAKHVEVTGIAEDGEDALIATGRLADFRCCFGKVDAEGRIDADAARILNVG KGDAISWIGR >Mature_330_residues MIRAAKPGDLQSIYEMAKLTGGGFTNLPPDKRALRAKLERAEASFASEKEYPSDELYLMVLEDLDSGEVRGTCQIFGQVG QRWPFYSYRIGTDSKHSEQLGRTFHAQVLMLSNDLNGASEVGGLFLHPAARAGGLGLLLARSRYLFIARHRARFADRILA ELRGVIDEAGGSPFWDGVAGKFFGMSFQEADQFNAVHGNQFIADLMPKHPVYIAMLPETARAVIGVPHPTGRAAMRMLEN EGFAFENYIDIFDGGPTMTARTDQVASIRDAKHVEVTGIAEDGEDALIATGRLADFRCCFGKVDAEGRIDADAARILNVG KGDAISWIGR
Specific function: Catalyzes the transfer of succinyl-CoA to arginine to produce N(2)-succinylarginine [H]
COG id: COG3138
COG function: function code E; Arginine/ornithine N-succinyltransferase beta subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the arginine N-succinyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1788043, Length=334, Percent_Identity=40.7185628742515, Blast_Score=236, Evalue=1e-63,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR007041 - InterPro: IPR017650 [H]
Pfam domain/function: PF04958 AstA [H]
EC number: =2.3.1.109 [H]
Molecular weight: Translated: 36075; Mature: 36075
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRAAKPGDLQSIYEMAKLTGGGFTNLPPDKRALRAKLERAEASFASEKEYPSDELYLMV CCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE LEDLDSGEVRGTCQIFGQVGQRWPFYSYRIGTDSKHSEQLGRTFHAQVLMLSNDLNGASE EECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHEEEEEEEECCCCCHHH VGGLFLHPAARAGGLGLLLARSRYLFIARHRARFADRILAELRGVIDEAGGSPFWDGVAG HCCEEEECCCCCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH KFFGMSFQEADQFNAVHGNQFIADLMPKHPVYIAMLPETARAVIGVPHPTGRAAMRMLEN HHHCCCHHHHHHCCCCCCCHHHHHHCCCCCEEEEECCCCCCEEEECCCCCHHHHHHHHHC EGFAFENYIDIFDGGPTMTARTDQVASIRDAKHVEVTGIAEDGEDALIATGRLADFRCCF CCCEEEEEEEEECCCCCCEECCCHHHHHCCCCEEEEEEECCCCCCEEEEECCCCHHHHHC GKVDAEGRIDADAARILNVGKGDAISWIGR CCCCCCCCCCCCHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MIRAAKPGDLQSIYEMAKLTGGGFTNLPPDKRALRAKLERAEASFASEKEYPSDELYLMV CCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE LEDLDSGEVRGTCQIFGQVGQRWPFYSYRIGTDSKHSEQLGRTFHAQVLMLSNDLNGASE EECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHEEEEEEEECCCCCHHH VGGLFLHPAARAGGLGLLLARSRYLFIARHRARFADRILAELRGVIDEAGGSPFWDGVAG HCCEEEECCCCCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH KFFGMSFQEADQFNAVHGNQFIADLMPKHPVYIAMLPETARAVIGVPHPTGRAAMRMLEN HHHCCCHHHHHHCCCCCCCHHHHHHCCCCCEEEEECCCCCCEEEECCCCCHHHHHHHHHC EGFAFENYIDIFDGGPTMTARTDQVASIRDAKHVEVTGIAEDGEDALIATGRLADFRCCF CCCEEEEEEEEECCCCCCEECCCHHHHHCCCCEEEEEEECCCCCCEEEEECCCCHHHHHC GKVDAEGRIDADAARILNVGKGDAISWIGR CCCCCCCCCCCCHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA