Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is 103487420
Identifier: 103487420
GI number: 103487420
Start: 2042340
End: 2042672
Strand: Direct
Name: 103487420
Synonym: Sala_1936
Alternate gene names: NA
Gene position: 2042340-2042672 (Clockwise)
Preceding gene: 103487418
Following gene: 103487421
Centisome position: 61.05
GC content: 63.36
Gene sequence:
>333_bases ATGAAACCGACCTTCCCCGAACGACCCGGATCCATGGACGACGCACGACTGAAAATGATGGAAGCCATCGCCCGCAAAAA GCTGGTGACGGCGCAATATAACGGCCAGTCGCTGACGCTGGCGCCGCACCTGTTGTTCGAACGACATGGCGACCTGTTCG TCAGCGCGCTCAACCTGAACAAGAACTGGCGATCGGACGAGGAGCCGCGGCTCGGCCATTTCAAGCTCGGTGGTCTCGCG GCGGTCGTGCTCAGCGATGACGGCTTCGATCCGCTCCCCGGCTTCGATGCCGCCCCGCCGCGGGAGCAGGATACGCCGCT GCTCGGCGTTTAG
Upstream 100 bases:
>100_bases GACCCGGGGAGGAAAGGGCAGCAGCCCTATGCCGCGATTGGTTTCGATTGGCAATGGGCGCTTTTCAAGCTCCGCCGGGT AGTTTAGGTTGCACTGCACA
Downstream 100 bases:
>100_bases AGCGCGACGACATGATATTGACCCACCGTGATTGCCCCCTGAAGTTCGTCGGCAAGAAGCGTCTCGCAGGACGGGCTGGT TGCCCGGACCAGAGACGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MKPTFPERPGSMDDARLKMMEAIARKKLVTAQYNGQSLTLAPHLLFERHGDLFVSALNLNKNWRSDEEPRLGHFKLGGLA AVVLSDDGFDPLPGFDAAPPREQDTPLLGV
Sequences:
>Translated_110_residues MKPTFPERPGSMDDARLKMMEAIARKKLVTAQYNGQSLTLAPHLLFERHGDLFVSALNLNKNWRSDEEPRLGHFKLGGLA AVVLSDDGFDPLPGFDAAPPREQDTPLLGV >Mature_110_residues MKPTFPERPGSMDDARLKMMEAIARKKLVTAQYNGQSLTLAPHLLFERHGDLFVSALNLNKNWRSDEEPRLGHFKLGGLA AVVLSDDGFDPLPGFDAAPPREQDTPLLGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12155; Mature: 12155
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPTFPERPGSMDDARLKMMEAIARKKLVTAQYNGQSLTLAPHLLFERHGDLFVSALNLN CCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCEEEECHHHHHHCCCCEEEEEECCC KNWRSDEEPRLGHFKLGGLAAVVLSDDGFDPLPGFDAAPPREQDTPLLGV CCCCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKPTFPERPGSMDDARLKMMEAIARKKLVTAQYNGQSLTLAPHLLFERHGDLFVSALNLN CCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCEEEECHHHHHHCCCCEEEEEECCC KNWRSDEEPRLGHFKLGGLAAVVLSDDGFDPLPGFDAAPPREQDTPLLGV CCCCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA