Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is yjaB [C]
Identifier: 103487334
GI number: 103487334
Start: 1945938
End: 1946420
Strand: Direct
Name: yjaB [C]
Synonym: Sala_1850
Alternate gene names: 103487334
Gene position: 1945938-1946420 (Clockwise)
Preceding gene: 103487333
Following gene: 103487335
Centisome position: 58.17
GC content: 64.18
Gene sequence:
>483_bases ATGACGCTCGCCATCCGCCCCGCCACCCGTGCCGACCTGCCGCTGATCGCCGAGTTCATCCGCGACCTCGCCGAATATGA AAGACTGTCGCACGAAGTCCGCTTCGACGAAGCGAAGCTCGGCGAAAACCTCTTCGGCCCGCGCCCCTATGCCGAGGTCG TGATCGGCGAAATCGACGGGACGCCGCAGGGCTTTGCGCTTTTCTTCCACAATTTCTCGACCTTCGAGGGGCGCCCCGGC ATCTACCTGGAGGATCTGTTCGTCCGTCCCGAAGCGCGCGGATCGGGACTCGGCAAGGCGCTGCTCGCGCATCTCGCCGA ACTGTGCATCGAACGCGATTGCGCACGCCTCGAATGGTGGGTGCTCGACTGGAACGAACCCAGCATCGGCTTCTACAAGA GCCTCGGCGCCAGGATGATGGACGAATGGACCGTGATGCGCGTCGATGGCGACGCGCTGACCCGGCTTTCGCGCACCACG TGA
Upstream 100 bases:
>100_bases GCCTATCCCGCGCTCAAGCGCGGGCTCGGCTACGCCACCTCCTGCGCGCTTCACAAACTTGAGGTTTGACAGCGGACCGA GCGCCCGACAGAGCCGCCCC
Downstream 100 bases:
>100_bases CCGACGCGCCGGATAAATATCAGCGATAACAGTGGGCCGCAGTCGCGGTTTGCAAGTCCCTTCGAATCATGTTCCCCTCT CACCGGGCCGTACCTTTGCG
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; N-Acetyltransferase; Acetyltransferase GNAT Family; GNAT Family Acetyltransferase; Diamine N-Acetyltransferase; GCN5-Like N-Acetyltransferase; Acetyltransferase Protein; Acetyltransferase Family Protein; Diamine Acetyltransferase; Histone Acetyltransferase HPA2-Like Acetyltransferase; Acetyltransferase GNAT Family Protein; Histone Acetyltransferase HPA; Gcn5-Related N-Acetyltransferase; ACETYLTRANSFERASE GCN5-Related N-Acetyltransferase; Gnat Acetyltransferase; Sortase-Like Acyltransferase; Spermidine/Spermine N1-Acetyl Transferase; N-Acetyltransferase Protein; GNAT-Family Acetyltransferase; LOW QUALITY PROTEIN Acetyltransferase; Argininosuccinate Synthase
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MTLAIRPATRADLPLIAEFIRDLAEYERLSHEVRFDEAKLGENLFGPRPYAEVVIGEIDGTPQGFALFFHNFSTFEGRPG IYLEDLFVRPEARGSGLGKALLAHLAELCIERDCARLEWWVLDWNEPSIGFYKSLGARMMDEWTVMRVDGDALTRLSRTT
Sequences:
>Translated_160_residues MTLAIRPATRADLPLIAEFIRDLAEYERLSHEVRFDEAKLGENLFGPRPYAEVVIGEIDGTPQGFALFFHNFSTFEGRPG IYLEDLFVRPEARGSGLGKALLAHLAELCIERDCARLEWWVLDWNEPSIGFYKSLGARMMDEWTVMRVDGDALTRLSRTT >Mature_159_residues TLAIRPATRADLPLIAEFIRDLAEYERLSHEVRFDEAKLGENLFGPRPYAEVVIGEIDGTPQGFALFFHNFSTFEGRPGI YLEDLFVRPEARGSGLGKALLAHLAELCIERDCARLEWWVLDWNEPSIGFYKSLGARMMDEWTVMRVDGDALTRLSRTT
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI19424126, Length=167, Percent_Identity=34.1317365269461, Blast_Score=107, Evalue=5e-24, Organism=Homo sapiens, GI4506789, Length=166, Percent_Identity=33.1325301204819, Blast_Score=100, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17559148, Length=141, Percent_Identity=32.6241134751773, Blast_Score=81, Evalue=2e-16, Organism=Drosophila melanogaster, GI24647013, Length=162, Percent_Identity=33.3333333333333, Blast_Score=86, Evalue=9e-18, Organism=Drosophila melanogaster, GI24647015, Length=127, Percent_Identity=35.4330708661417, Blast_Score=74, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.- [C]
Molecular weight: Translated: 18223; Mature: 18092
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLAIRPATRADLPLIAEFIRDLAEYERLSHEVRFDEAKLGENLFGPRPYAEVVIGEIDG CEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHEEEECCCC TPQGFALFFHNFSTFEGRPGIYLEDLFVRPEARGSGLGKALLAHLAELCIERDCARLEWW CCCCEEEEEECCCCCCCCCCCEEEHEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE VLDWNEPSIGFYKSLGARMMDEWTVMRVDGDALTRLSRTT EEECCCCCCHHHHHHHHHHHCCEEEEEECCHHHHHHHCCC >Mature Secondary Structure TLAIRPATRADLPLIAEFIRDLAEYERLSHEVRFDEAKLGENLFGPRPYAEVVIGEIDG EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHEEEECCCC TPQGFALFFHNFSTFEGRPGIYLEDLFVRPEARGSGLGKALLAHLAELCIERDCARLEWW CCCCEEEEEECCCCCCCCCCCEEEHEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE VLDWNEPSIGFYKSLGARMMDEWTVMRVDGDALTRLSRTT EEECCCCCCHHHHHHHHHHHCCEEEEEECCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA