| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487300
Identifier: 103487300
GI number: 103487300
Start: 1914292
End: 1914573
Strand: Direct
Name: 103487300
Synonym: Sala_1816
Alternate gene names: NA
Gene position: 1914292-1914573 (Clockwise)
Preceding gene: 103487295
Following gene: 103487304
Centisome position: 57.23
GC content: 63.83
Gene sequence:
>282_bases TTGCTCACATTAGAGCGCGATGACCTGATATTGACCCACCGTGATTGCCCCCTGAAGTTCGTCGGCAAGAAGCGTCTCGC AGGACGGGCTGGTTGCCCGGACCAGAGACGCGCCGCTGTCCGGCGGGCTTCAGGGGGCAACCCCTCCAGGGCGGGTCGAT TTTGGCCGATTGCCACGTTGCTCGTCGGGCGCGATGTCCCGCATCGCGCCGCTCCTCGCGCCTCGCACTCGGCCAAAATC GCCTCCGTCACGGTGGATCAATATCATGTCATCGCGCTCTAG
Upstream 100 bases:
>100_bases TGGCTACGCGGCCGCCAAGCTTATGCCGGGGATGCTAATCGCGCGCCTGTGCGTTGGCAAGCGGACTCATGGCGCCGATT GACGCGGTAACATCAAGGGA
Downstream 100 bases:
>100_bases AGCGGCGTGCTGCCAAGTTTCGCTGCCCTCCCCTGAAGGGGAGGGCAGGATCAGATCAAATCGCCCCGTGGCAATGCTTG TATTTGCGCCCCGACCCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MLTLERDDLILTHRDCPLKFVGKKRLAGRAGCPDQRRAAVRRASGGNPSRAGRFWPIATLLVGRDVPHRAAPRASHSAKI ASVTVDQYHVIAL
Sequences:
>Translated_93_residues MLTLERDDLILTHRDCPLKFVGKKRLAGRAGCPDQRRAAVRRASGGNPSRAGRFWPIATLLVGRDVPHRAAPRASHSAKI ASVTVDQYHVIAL >Mature_93_residues MLTLERDDLILTHRDCPLKFVGKKRLAGRAGCPDQRRAAVRRASGGNPSRAGRFWPIATLLVGRDVPHRAAPRASHSAKI ASVTVDQYHVIAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10192; Mature: 10192
Theoretical pI: Translated: 11.84; Mature: 11.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTLERDDLILTHRDCPLKFVGKKRLAGRAGCPDQRRAAVRRASGGNPSRAGRFWPIATL CCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHH LVGRDVPHRAAPRASHSAKIASVTVDQYHVIAL HHCCCCCCCCCCCCCCCCEEEEEECCCEEEEEC >Mature Secondary Structure MLTLERDDLILTHRDCPLKFVGKKRLAGRAGCPDQRRAAVRRASGGNPSRAGRFWPIATL CCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHH LVGRDVPHRAAPRASHSAKIASVTVDQYHVIAL HHCCCCCCCCCCCCCCCCEEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA